mRNA_F-serratus_M_contig685.17909.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig685.17909.1 vs. uniprot
Match: D7FPY8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY8_ECTSI) HSP 1 Score: 588 bits (1517), Expect = 7.200e-191 Identity = 402/945 (42.54%), Postives = 490/945 (51.85%), Query Frame = 3
Query: 351 ELTKANYVKEFDPLTEECVYKNRRTGRMSHRKPVGIYGTDDLETPRIFAPLGECGPGLLSESSLPPQFALVITNRVFDSPKIPDIPSQADTRYVEGDHDALREVLEHPCFCKFLPENCFFFKNAIFEVFVAALASFSRQVSTSIKRL-------------------------------ESEWKGRIETRRKEKKARLLESGGVERSKKDSQDTVTNKNMAEDEKVEE---FNPQEASLFVYVCTHSAEITKGKGIVGSYLVASDTSWKSKDQLARTAVPLKTFAEAIGRIQVRHKIVFFDVVHTAREWRGFKTRHLYPSRELYDNAARLSGAVVIGSCRIGGTREVNLEILRKTTETVWAIEDPTNGGSGSHAGRRISTGDNAGGSNNVSSELCDDDRAGSTDVDASWNGNGSNRGSTNEVFGSRRTNGRGARVHQPEDSDRQRGFECDRFSNDGKLRGSSASRKNPRIVIAVMDDDDTKDNARGCDRRQRLFGVTLKNVAGGREVSLCQDDAMRVCEPVYDRAVYGKEKSVFGRAVRDALGGECIVNSGTASRVLVVHLYNFIVQRLDSFE--RLSPKRTESKEWLVDGPNQLAGFRK------------------KKVAAEVIPKQASWWWRSITRSAAQVGHEIYPTGELRMTQAHSDPPTPIALYGPARQHTKAPVIVGLSAFSIARVTVCAAPSPXXXPQTPYAVEVSRDYVRLAWDNNADFAGAPPISYQLEQRGSLRNNGTWEPVFPPWYPAVVSQTVKVPHRVPGFGLQYRVRARNFGGWGAFSNPTITIVTKPWLANREGGKSTSRAMRALARTGGARLVLERMRRYSSSLLVQESGFHELIAEFNKGGGITRASLARVVVIVVSDAMKTFSQVRKIQASGLLLLGWAARGLG--GGGLISQDTVERSLELVAAAEKFHSMDATVKGNALWTRSNL 3017
EL KANYVKE D L+ E +Y+NRRTG +S RKPV + G DDLETPR FA L PG S PQFA++ITN+ F+SPKIP IP Q V DHDALRE LEHP F KF ENCFF KNA EV A+LAS RQ+S+++ R E E G + A L E G + K +D + F+P+E L VYVCTH A I+KGKG+ G+YLVA+DTSWKS++QLA +AV L+TFA AI RIQ+RHK++F DVVHT R+ GFKTRHLYP R LYD+AA L GAVV+GSCRIG T EV+L++LR WA +P + N GG N + R G+ AS G+G +G +E G MR C VYDRA Y SVFGRAVRD L G+C+ N+ SRVLVVHLY+FI + F RLS + E++ KK A K R A + E+ E+ M + + RQ T+ PVI GLS XXX P+ +E++R VRLAWD+ F G PP Y+LE +G LR N TW VFPP +P++ SQ V + HRVPG GL+YRVRA N GGWGA S+PT + TK WL + G S +RAM++LAR GGARLVL RMRRYS+SLL QESGFH+L+AEFNKG GI RASLA V +VV+DAM+ FSQVR IQ SGLLLLGWAARG G G ++S D VER L LVA AEK HSMD +KG+A+W RS+L
Sbjct: 20 ELIKANYVKEIDSLSGEPIYRNRRTGYISRRKPVFL-GNDDLETPRYFAALDNYDPG----KSAIPQFAVIITNQEFESPKIPTIPEQ-----VLADHDALRETLEHPYFSKFQSENCFFVKNATSEVMTASLASVQRQISSTMARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENTEDEGGGGVSN-----VAHLREEGERQDGNKGQEDVDSXXXXXXXXXXXXXXXFDPEEGLLLVYVCTHVAVISKGKGVAGTYLVATDTSWKSREQLATSAVLLQTFAAAIDRIQLRHKVLFLDVVHTERKHEGFKTRHLYPPRNLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRGEAADFWAAVEPRH---------------NRGGKNKARA------RKGAL---ASGGGSGMAKGQQHEEGG------------------------------------------------------------------------------------------MRACAAVYDRANYEDIMSVFGRAVRDGLKGQCVENT-KLSRVLVVHLYDFIRREFSPFAHPRLSVAQEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKEADRAEAK------RRARLGAKALAEEVRQAKEVAMLREVEEE---------KRQRTQVPVIAGLSIXXXXXXXXXXXXXXXXXXLIPFPIEITRTSVRLAWDD-PPFPGEPPFLYELEAKGDLRGNSTWASVFPPRFPSISSQPVNISHRVPGLGLRYRVRACNHGGWGAASDPTEVVTTKAWLEDT-GANSAARAMKSLARAGGARLVLARMRRYSASLLNQESGFHQLVAEFNKGLGIPRASLAEEVAVVVADAMEAFSQVRGIQDSGLLLLGWAARGKGEAGSDVLSADLVERCLGLVATAEKLHSMDVAIKGHAIWARSHL 817
BLAST of mRNA_F-serratus_M_contig685.17909.1 vs. uniprot
Match: A0A6H5KZI5_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI5_9PHAE) HSP 1 Score: 559 bits (1441), Expect = 7.660e-177 Identity = 418/1071 (39.03%), Postives = 547/1071 (51.07%), Query Frame = 3
Query: 351 ELTKANYVKEFDPLTEECVYKNRRTGRMSHRKPVGIYGTDDLETPRIFAPLGECGPGLLSESSLPPQFALVITNRVFDSPKIPDIPSQA-----DTRY----------------------VEGDHDALREVLEHPCFCKFLP--ENCFFFKNAIFEVFVAALAS-----------FSRQVSTSIKRLESEWKGRIETRRKEKKARLLESGGVERSKKDSQDT---VTNKNMAEDE-------KVEE-------------------FNPQEASLFVYVCTHSAEITKGKGIVGSYLVASDTSWKSKDQLARTAVPLKTFAEAIGRIQ--------------------------VRHKIVFFDVVHTAREWRGFKTRHLYPSRELYDNAARLSGAVVIGSCRIGGTREVNLEILRKTTETVWA-IEDPTNGGSGSHAGRRISTGDNAGGSNNVSSELCDDDRAGSTD-------------------------------------------------------VDASWNGNGSNRGSTNEVFG------SRRTNGRGARVHQPEDSDRQRGFECDRFSNDGKLRGSSASRKNPRIVIAVMDDDDTKDNA--RGCDRRQRLFGVTLKNVAGGREVSLCQDDAMRVCEPVYDRAVYGKEKSVFGRAVRDALGGECIVNSGTASRVLVVHLYNFIVQRLDSFE--RLSPKRTESKE-------------------WLVDGPNQLAGFRKKKVAAEVIPKQASWWWRSITRSAAQVGHEIYPTGELRMTQAHSDPPTPIALYGPARQHTKAPVIVGLSAFSIARVTVCAAPSPXXXPQTPYAVEVSRDYVRLAWDNNADFAGAPPISYQLEQRGSLRNNGTWEPVFPPWYPAVVSQTVKVPHRVPGFGLQYRVRARNFGGWGAFSNPTITIVTKPWLANREGGKSTSRAMRALARTGGARLVLERMRRYSSSLLVQESGFHELIAEFNKGGGITRASLARVVVIVVSDAMKTFSQVRKIQASGLLLLGWAARGLG--GGGLISQDTVERSLELVAAAEKFHSMDATVKGNALWTRSNL 3017
EL KANYVKE D L+ E +Y+NRRTG +S RKPV + G DDLETPR FA L PG S PQFA++ITN+ FDS KIP+IP QA ++Y V DHDALRE LEHP F KF + F ++ S S ++S+++ RL+ E + R + RKE++AR E R++K ++ V+N +E K EE +P+E L VYVCTH A I++GKG+ G+YLVA++TSWKS++ LA +AV L+TFA AI RIQ +RHK++F DVVHT RE GFKTRHLYP R+LYD+AA L GAVV+GSCRIG T EV+L++LR+ T WA +E NGG + A R GD+ + DRA S+ + +G G NR ++R+ G + + RG + DR + +++ S ++ PR + ++ ++ + + G R+ L +A G++ ++ MR C VYDRA Y + SVFGRAVRD L G+C+ N+ SRVLVVHLY+FI + F RLS R E++ KK A K R A + E+ E M + + R+ T+ PVI G S +IAR T CA+ XXX +E++R VRLAWD+ F G PP Y+LE +G LR N TW VFPP YP++ SQ V + HRVPG GL+YRVRA N GGWGA S+PT + TK WL + G S +RAM++LAR GGARLVL RMRRYS+SLL QESGFH+L+AEFNKG GI RASLA+ V +VV+DAM+ FSQVR IQ SGLLLLGWAARG G G ++S D VER L LVA AEK HSMD +KG+A+W RS+L
Sbjct: 13 ELIKANYVKEIDSLSGEPIYRNRRTGYISRRKPVFL-GNDDLETPRYFAALDNYDPG----KSAIPQFAVIITNQEFDSTKIPNIPGQAVRQRHASKYATQPRAESPFLPSAPTPAAWSQVLADHDALRETLEHPYFSKFQSGDDGKFSIGATSADIIKTCCRSQLGVHMRRSLFLSLKISSTMARLKKESEKRAKALRKEREARAWERRNARRAEKAEEEGGGGVSNVARPREEGERQDGNKGEEDVXXXXXXXXXXXXXXXXXXDPEEGLLLVYVCTHVAVISRGKGVAGTYLVATNTSWKSREHLATSAVLLETFAAAIDRIQATVFPHIFTDHCPLRPPQHFGVPLSKLRHKVLFLDVVHTEREHEGFKTRHLYPPRDLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRRETAGFWASVERRHNGGGKNKA--RGGVGDS------------ETDRATSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSSGTGGNRXXXXXXXXXXXGRRNQRSYKHGGGSSDEDVRNAFRGNKRDRRRHRLQIKTSGRGKRVPRSLDSLASGNNRGETSPKSGTVRKGALASGGGSGMAKGQQH---EEGGMRACAAVYDRANYEEIMSVFGRAVRDGLKGQCVENT-KLSRVLVVHLYDFIRREFSPFAHPRLSVAREEAEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKEADRAEAK------RRARLGAKALAEEVRQAKEAAMLREVEEE---------KRRRTQVPVIAGPSISAIARATTCASXXXXXXXXXXXXIEITRTSVRLAWDD-PPFPGEPPFLYELEAKGDLRGNSTWASVFPPRYPSISSQPVNISHRVPGLGLRYRVRACNHGGWGAASDPTEVVTTKAWLEDT-GANSAARAMKSLARAGGARLVLARMRRYSASLLNQESGFHQLVAEFNKGLGIPRASLAQEVAVVVADAMEAFSQVRGIQDSGLLLLGWAARGKGEAGSDVLSADLVERCLGLVATAEKLHSMDVAIKGHAIWARSHL 1043 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig685.17909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig685.17909.1 >prot_F-serratus_M_contig685.17909.1 ID=prot_F-serratus_M_contig685.17909.1|Name=mRNA_F-serratus_M_contig685.17909.1|organism=Fucus serratus male|type=polypeptide|length=987bp MYLDGVFKLKGPWKSLDKSGSNDEPFEIDEEELEEERLDAAAKKIQALFRback to top mRNA from alignment at F-serratus_M_contig685:86905..108884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig685.17909.1 ID=mRNA_F-serratus_M_contig685.17909.1|Name=mRNA_F-serratus_M_contig685.17909.1|organism=Fucus serratus male|type=mRNA|length=21980bp|location=Sequence derived from alignment at F-serratus_M_contig685:86905..108884+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig685:86905..108884+ >mRNA_F-serratus_M_contig685.17909.1 ID=mRNA_F-serratus_M_contig685.17909.1|Name=mRNA_F-serratus_M_contig685.17909.1|organism=Fucus serratus male|type=CDS|length=5922bp|location=Sequence derived from alignment at F-serratus_M_contig685:86905..108884+ (Fucus serratus male)back to top |