mRNA_F-serratus_M_contig684.17895.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI) HSP 1 Score: 203 bits (516), Expect = 3.100e-58 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKSTV KLLLRFYDPTSGSL LDG+DV+SLN+ YYR KIGYVGQEPVLFAGTIRDN+A+GKP ATD EIV AAK+ANAH+FIK FPDAYAT+VG+GGLQLSGGQKQRIAIARAIIK
Sbjct: 436 SGGGKSTVTKLLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIKSFPDAYATDVGTGGLQLSGGQKQRIAIARAIIK 554
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.920e-55 Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKST+ KLLLRFYDPTSG++ LDG D+RSLN+ +YR +IGYVGQEPVLFAG+IRDNIANGKPGATD EI+ AAK+ANAHEFIKGFP Y TEVG GGLQLSGGQKQR+AIARAIIK
Sbjct: 469 SGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIKGFPKGYNTEVGEGGLQLSGGQKQRVAIARAIIK 587
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA) HSP 1 Score: 193 bits (491), Expect = 7.300e-55 Identity = 96/119 (80.67%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKST+ KLLLRFYDPTSG++ LDG D+RSLN+ +YR +IGYVGQEPVLFAG+IRDNIANGKPGATD EI+ AAK+ANAHEFIKGFP Y T+VG GGLQLSGGQKQR+AIARAIIK
Sbjct: 366 SGGGKSTMTKLLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIKGFPKGYRTDVGEGGLQLSGGQKQRVAIARAIIK 484
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.630e-53 Identity = 95/119 (79.83%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKST+ KLLLRFYDPTSG + LDG D+RSLN+ +YR +IGYVGQEPVLF+G+IRDNIANGKPGATD EI AAK+ANAHEFIKGFP Y T VG GGLQLSGGQKQR+AIARAIIK
Sbjct: 365 SGGGKSTMTKLLLRFYDPTSGCIRLDGADIRSLNLNWYRQQIGYVGQEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIKGFPKGYGTNVGEGGLQLSGGQKQRVAIARAIIK 483
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI) HSP 1 Score: 181 bits (458), Expect = 3.400e-51 Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKST+ KLLLRFYDPTSG++ LDG D++SLN+A+YR +IGYVGQEPVLFAGTI NIANGK G+T EI+ AAK+ANAHEFIK FP+ Y T VG GG QLSGGQKQRIAIARAIIK
Sbjct: 408 SGGGKSTITKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQRIGYVGQEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIK 526
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI) HSP 1 Score: 180 bits (456), Expect = 3.810e-50 Identity = 91/119 (76.47%), Postives = 104/119 (87.39%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKST+ KLLLRFYDPTSG++ LDG D++SLN+A+YR +IGYVGQEPVLFAGTI NIANGK G+T EI+AAA++ANAHEFIK FP+ Y T VG GG QLSGGQKQRIAIARAIIK
Sbjct: 397 SGGGKSTMTKLLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIK 515
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI) HSP 1 Score: 179 bits (453), Expect = 9.710e-50 Identity = 95/120 (79.17%), Postives = 104/120 (86.67%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGA-TDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SGGGKSTV KLLLRFYDPTSGS+ LDG D++SLN+A+YR +IGYVGQEPVLFAGTI NIANGK GA T EIVAAAK+ANAH+FI+ FPD Y T VG GG QLSGGQKQRIAIARAIIK
Sbjct: 427 SGGGKSTVTKLLLRFYDPTSGSVSLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIESFPDGYNTGVGEGGFQLSGGQKQRIAIARAIIK 546
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: A0A7S3XS79_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS79_HETAK) HSP 1 Score: 165 bits (417), Expect = 1.660e-48 Identity = 80/119 (67.23%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SG GKST+ L+LRFYDP G++ LDG D+R LN+ +YRSKIGYVGQEPVLFAGT+R N+ +G+PGATD E+ AA++ANAH FI+ FP Y T+VG G+QLSGGQKQRIAIARA+IK
Sbjct: 24 SGEGKSTLIALVLRFYDPREGAVCLDGQDIRGLNLKWYRSKIGYVGQEPVLFAGTVRTNVRSGRPGATDAEVQQAAEAANAHGFIQAFPQGYETDVGEAGVQLSGGQKQRIAIARALIK 142
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: A0A7S3Y5X1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5X1_HETAK) HSP 1 Score: 162 bits (411), Expect = 1.030e-44 Identity = 82/119 (68.91%), Postives = 96/119 (80.67%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SG GKST LLLRFYDP G +L+DG DVR L++ ++RS+IGYV QEPVLFAGTI+DNI GKPGATD E+ AAA+ ANA FI+ FP YATEVG GG QLSGGQKQRIAIARA+++
Sbjct: 284 SGSGKSTFMSLLLRFYDPQGGQVLVDGEDVRGLHLRHFRSQIGYVKQEPVLFAGTIKDNILRGKPGATDEEVYAAARKANADAFIRAFPMGYATEVGEGGAQLSGGQKQRIAIARALVR 402
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Match: T0PRI0_SAPDV (ATP-binding cassette, subfamily B (MDR/TAP), member 1 (Fragment) n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PRI0_SAPDV) HSP 1 Score: 152 bits (383), Expect = 5.470e-44 Identity = 81/119 (68.07%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 1 SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVLFAGTIRDNIANGKPGATDGEIVAAAKSANAHEFIKGFPDAYATEVGSGGLQLSGGQKQRIAIARAIIK 357
SG GKST LL RFYDP SG++ LDG+D+RSLN+ RS I V QEPVLFAGTI DNIA GKPGAT EI AAK ANAH+FI FP+ Y T VG G+Q+SGGQKQRIAIARAII+
Sbjct: 21 SGSGKSTAIGLLERFYDPASGAVFLDGHDLRSLNVQSLRSHISIVSQEPVLFAGTIADNIATGKPGATMAEIEDAAKKANAHDFIMRFPNGYETTVGDRGVQVSGGQKQRIAIARAIIR 139 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig684.17895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig684.17895.1 >prot_F-serratus_M_contig684.17895.1 ID=prot_F-serratus_M_contig684.17895.1|Name=mRNA_F-serratus_M_contig684.17895.1|organism=Fucus serratus male|type=polypeptide|length=119bp SGGGKSTVAKLLLRFYDPTSGSLLLDGYDVRSLNIAYYRSKIGYVGQEPVback to top mRNA from alignment at F-serratus_M_contig684:407906..410861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig684.17895.1 ID=mRNA_F-serratus_M_contig684.17895.1|Name=mRNA_F-serratus_M_contig684.17895.1|organism=Fucus serratus male|type=mRNA|length=2956bp|location=Sequence derived from alignment at F-serratus_M_contig684:407906..410861- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig684:407906..410861- >mRNA_F-serratus_M_contig684.17895.1 ID=mRNA_F-serratus_M_contig684.17895.1|Name=mRNA_F-serratus_M_contig684.17895.1|organism=Fucus serratus male|type=CDS|length=714bp|location=Sequence derived from alignment at F-serratus_M_contig684:407906..410861- (Fucus serratus male)back to top |