mRNA_F-serratus_M_contig681.17874.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.350e-49 Identity = 86/163 (52.76%), Postives = 117/163 (71.78%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGL--GDEDYD-DDDKYEDVYRDKLIFVHANREPTTREGGYRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
QD+LD V+PGD I ++ G+Y+ED+ T+ DGT ITI+G+ ++ NVVLRG G + + E+KHDYY +E+F+++G GD D D D D +D++RD LI+ ANREPT R GGY S +DGL+IR+M + NAG ECIRLR VT AE+Y N I +CG+YDF
Sbjct: 34 QDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYAVANREPTERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDF 196
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.680e-49 Identity = 85/163 (52.15%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYD---DDDKYEDVYRDKLIFVHANREPTTREGGYRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
QD+LD V+PGD I + G+Y+ED+ T+ DGT ITI+G+ +R NVVLRG G + + E+KHDYY +E+F+++G ++D D D D ED++RD LI+ ANREPT R+GGY S +DGL+IR+M + NAG ECIRLR VT+AE+Y N I++CG+YD+
Sbjct: 40 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDY 202
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 178 bits (451), Expect = 4.710e-49 Identity = 85/163 (52.15%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYD---DDDKYEDVYRDKLIFVHANREPTTREGGYRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
QD+LD V+PGD I + G+Y+ED+ T+ DGT ITI+G+ +R NVVLRG G + + E+KHDYY +E+F+++G ++D D D D ED++RD LI+ ANREPT R+GGY S +DGL+IR+M + NAG ECIRLR VT+AE+Y N I +CG++DF
Sbjct: 39 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDF 201
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: D7FIS4_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI) HSP 1 Score: 155 bits (391), Expect = 7.620e-42 Identity = 78/153 (50.98%), Postives = 109/153 (71.24%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYD---DDDKYEDVYRDKLIFVHANREPTTREGGYRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDN 450
+D+LD V+PGD I + G+Y+ED+ T+ DGT ITI+G+ +R NVVLRG G S + E+KHDYY IE+F++DG ++D + D D ED++RD LI+ A+REPT R+GGY STLDGL+IR+M L NAG ECIRLR T ++ +++
Sbjct: 17 KDALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECIRLRDVGTSSDQWED 169
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI) HSP 1 Score: 113 bits (282), Expect = 7.380e-27 Identity = 61/170 (35.88%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGD---RSYIFEVKHDYYTIENFSIDGLGDEDYDDDDKYEDVYRDKLIFVHANREPTTREGG-------YRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
Q +LD PGDT+ + PG Y+E VTK G E A ITI+G ET +++G D Y +++H YY ++ F+IDG ++ Y DK ++V NR+ + +RS+++GL++ +M++ N G EC+R+R+FVT++++Y+N I NCG +DF
Sbjct: 40 QSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEG---ETY--GAIVKGDQDIDNDGYALKIEHSYYRLDRFTIDGKHSKNN---------YIDKCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDF 195
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE) HSP 1 Score: 115 bits (288), Expect = 7.620e-27 Identity = 64/164 (39.02%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYDDDDKYEDVYRDKLIFVHANREPT--TREGG--YRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
Q +LD SPG TI+I G Y E + ++VDGT+ IT++G ++ +++G+ E+ HDYY + +F+IDGL ED + D+ E +R K + V NR+P T E G Y+S +DG++I++M + N G E IR+R+FVT ++ N I + G YDF
Sbjct: 372 QAALDAASPGTTILIEAGTYHEALKSRVDGTKEQPITLQGP---SSGPTAIIKGSDKSGTCVEINHDYYVLNDFTIDGLIKEDCNKDNVRE-CFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDF 531
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE) HSP 1 Score: 113 bits (282), Expect = 5.030e-26 Identity = 59/169 (34.91%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVL--RGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYDDDDKYEDVYRDKLIFVHANREPTTREGG-------YRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
Q +LD PGDT+ + PG Y+E VTK G E A ITI+G G +V +G + Y +++H YY ++ F+IDG ++ Y DK ++V NR+ + +RS+++GL++ +M++ N G EC+R+R+FVT++++Y+N I NCG +D+
Sbjct: 344 QSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGE----TYGAIVKGDQGIDNDGYALKIEHSYYRLDRFTIDGKHSKNN---------YIDKCLYVQQNRDNDDKAKKINFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDY 499
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: D7FN05_ECTSI (EsV-1-164 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN05_ECTSI) HSP 1 Score: 102 bits (254), Expect = 9.060e-25 Identity = 53/110 (48.18%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYD---DDDKYEDVYRDKLIFVHANREP 321
QD+LD V+PGD I I G+Y+EDI T +DGT ITI+G+ +R NVVLRG G S +FEVKHDYY IE+F+++G ++D D D ++++RD LI+ R P
Sbjct: 33 QDALDEVNPGDVIEIGHGDYWEDIKTTIDGTADMPITIRGAGGTDDRDNVVLRGDGTSSRVFEVKHDYYIIEDFTVNGDAEDDPDRGTGSDSIKELWRDILIYATGRRFP 142
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT) HSP 1 Score: 106 bits (265), Expect = 2.970e-24 Identity = 63/160 (39.38%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGLGDEDYDDDDKYEDVYRDKLIFVHANREPTTREGGYRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
Q ++D G+TI ++ G Y +D V+K +G A I IKG++D +G G + E+ HDY ++ F++DG Y DK E YRDKLI+V + ++ + GL I++MN+ NAG ECIRLR+F T EI +N I NCGV DF
Sbjct: 102 QKAIDLAQAGETINLSEGIYLQDFVSKRNGKSDAPIVIKGTKDSIIKG-------GGNGRVIEINHDYIILDGFTVDGF----YGSSDKAES-YRDKLIYVLGKEK--------KNGVTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDF 241
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC) HSP 1 Score: 106 bits (264), Expect = 1.210e-23 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 1
Query: 1 QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVVLRGTGDRSYIFEVKHDYYTIENFSIDGL-GDEDYDDDDKYEDVYRDKLIFVHANREPTT-REGG--YRSTLDGLIIRDMNLINAGAECIRLRHFVTFAEIYDNSILNCGVYDF 480
Q LD PGDTI++ G Y +D+ + GT RIT+KGS V+RG D S + E+ H Y T+E F++ G G E+Y DK +F+ +P RE G Y+S+LDG++++ M + + G EC+R+R F T EIY N I CG DF
Sbjct: 28 QAHLDKARPGDTIVLGDGEYEQDLKSVTHGTPDQRITVKGSR------RAVVRGA-DSSRVVEINHSYITLEGFTVSGKRGGEEY----------ADKCVFILGTAKPRIIRENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDF 174 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig681.17874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig681.17874.1 >prot_F-serratus_M_contig681.17874.1 ID=prot_F-serratus_M_contig681.17874.1|Name=mRNA_F-serratus_M_contig681.17874.1|organism=Fucus serratus male|type=polypeptide|length=162bp QDSLDYVSPGDTIIINPGNYFEDIVTKVDGTESARITIKGSEDETNRGNVback to top mRNA from alignment at F-serratus_M_contig681:358341..360530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig681.17874.1 ID=mRNA_F-serratus_M_contig681.17874.1|Name=mRNA_F-serratus_M_contig681.17874.1|organism=Fucus serratus male|type=mRNA|length=2190bp|location=Sequence derived from alignment at F-serratus_M_contig681:358341..360530- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig681:358341..360530- >mRNA_F-serratus_M_contig681.17874.1 ID=mRNA_F-serratus_M_contig681.17874.1|Name=mRNA_F-serratus_M_contig681.17874.1|organism=Fucus serratus male|type=CDS|length=972bp|location=Sequence derived from alignment at F-serratus_M_contig681:358341..360530- (Fucus serratus male)back to top |