mRNA_F-serratus_M_contig680.17867.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig680.17867.1
Unique NamemRNA_F-serratus_M_contig680.17867.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: D8LLI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI1_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 1.050e-123
Identity = 203/300 (67.67%), Postives = 234/300 (78.00%), Query Frame = 3 
Query:   36 AIMVATCGYLSLGRSHAFVTPGVAFPPAMPATSQKVREFMSMAAAP---GSGAAPVTVGGPTTRSEALGVVGAALLGAVVVTGGAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEGKF 926
            A+ VA C     G  +AF+TPGV   P +P ++++        AA    G            +RSEAL   GAA+LGAVVV  G  +PASA S A+ANK+LS ++LPPVVD P GFNTL+EGYG D  LKN+LGSSNRDP LVTWNYPKGWIV RPNTDTNKEAGTVSTGDYGRGDSA LFVA KSL+GG+SLS+K+T+EGV+KKAL+QKG+NQFQSFKLKSVK G TD+ GNKYYIADFQYELLTGAGF VERKGVASV ++GN+V AVVGATTA+RAK+VK QLQEIA SFR YEGKF
Sbjct:    4 AVAVAACW---AGGINAFITPGV---PVVPVSARQASSSSGRVAATTRMGVSDREGLASSACSRSEALSTFGAAVLGAVVVGTGVPAPASAGSVAEANKRLSEYNLPPVVDVPGGFNTLLEGYGKDGALKNSLGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDTMEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEGKF 297
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A835Z8Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 5.420e-56
Identity = 125/292 (42.81%), Postives = 170/292 (58.22%), Query Frame = 3 
Query:   54 CGYLSLGRSHAFVTPGVAFPPAMPATSQKVREFMSMAAAPGS-GAAPVTVGGPTTRSEALGVVGAALLGAVVVTGGAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLS--NKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEG 920
            C  + +  + A    G   P A+  ++   R  + M+A PG   AAP  V    +R +A+    AA+  AV++      PASA+     N +L+ + LP V   P+G   L+E YG D          NR+  LVTWNYP GWI  RP+ DTN E GTV+TGDY +GDSA L V    ++GG  LS  NK  VE ++ +++ QKG NQ Q+FKLK V  GAT   G +Y   +F+Y+LLTGAGFIVER G  S+ +VG  V +V+  TTA+R K ++ +LQEIA SFR Y+G
Sbjct:    4 CVAMCVAATLAACAQGFVVPCAVRHSAAAQRSALQMSAQPGDVTAAPQQV----SRRQAMVAASAAIAAAVLMQ--EPQPASALGLKAVNARLADYGLPGVGKPPDGMKALLEIYGRD---------QNRETLLVTWNYPNGWITQRPSLDTNSEDGTVATGDYQKGDSAFLVVQPLDVLGGEKLSATNKALVEKLVLQSITQKGANQIQNFKLKKVTEGATGAKGQQYINVEFKYDLLTGAGFIVERVGYGSLTQVGKGVQSVMAVTTAARLKKLQPKLQEIATSFRVYDG 280
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A4D9DCV0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCV0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.820e-45
Identity = 93/215 (43.26%), Postives = 129/215 (60.00%), Query Frame = 3 
Query:  276 GAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEG 920
            G   PA A   +  N +L+S+ LPP++D P GF+ LVE YG  AG K       R+  LV + YP  W+V++P+ D N E GT+S GDY +GDSAA +V      G     + +    V+ +A+ QK  N +Q+FK+   + GA    G +Y I +F+YELLTGAGF V+RKGVASV +VG NV  +  ATTA+R K +      +A+SFR Y+G
Sbjct:   13 GVVQPAQAAGLSKVNGELASYGLPPILDVPGGFSPLVEVYGKAAGAKKE-----RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVTRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 222
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: W7TXP4_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXP4_9STRA)

HSP 1 Score: 169 bits (428), Expect = 9.310e-45
Identity = 93/215 (43.26%), Postives = 129/215 (60.00%), Query Frame = 3 
Query:  276 GAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEG 920
            G   PA A   +  N +L+ + LPP++D P GF+ LVE YG  AG K       R+  LV + YP  W+V++P+ D N E GT+S GDY +GDSAA +V      G     + +    V+K+A+ QK  N +Q+FK+   + GA    G +Y I +F+YELLTGAGF V+RKGVASV +VG NV  +  ATTA+R K +      +A+SFR Y+G
Sbjct:  104 GVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKE-----RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 313
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A7S2V7M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7M0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.760e-44
Identity = 99/242 (40.91%), Postives = 151/242 (62.40%), Query Frame = 3 
Query:  213 TRSEALGVVGAALLGAVVVTGGAASP---ASAVSTADANKKLSSFDLPPVV-DAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSN-KETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEGK 923
            +R EA+   G A  GA+++ G   S    A A S  +AN +L+++ + P   + P GF+ LVE +G D G+        R P+L+++ YP  W++ +P+  TN E+GT + G+Y +GDSAA++V    + G + ++  K+ +  ++   L QKG+NQ+Q+FK   + AGAT   G KYY+ DF+YELLTGAGF ++R+GVA+V     NV A+V ATT +R K +   L  IA+SFRAY+GK
Sbjct:   58 SRREAIINAGQAA-GAIMIAGVLGSSPQSAEAKSIKEANNELTNYGVSPFEGNVPQGFSPLVEVWGKD-GI--------RPPYLISFLYPALWVIQKPSMTTNGESGTYAAGNYQKGDSAAVYVGPSEVDGNDVMAKGKDYISSIVLGGLTQKGENQYQNFKTTKIVAGATGLKGQKYYVVDFKYELLTGAGFYIDRRGVAAVTGTPKNVQAIVCATTDTRYKKLADDLHVIADSFRAYDGK 289
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: F0YP05_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP05_AURAN)

HSP 1 Score: 155 bits (393), Expect = 1.830e-40
Identity = 95/238 (39.92%), Postives = 143/238 (60.08%), Query Frame = 3 
Query:  204 GPTTRSEALGVVGAALLGAVVVTGGAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYE 917
            GP+         GA+L+ A +V+  A +PA A   A  N+KL    LPPV   P+GF+ ++     D  L            +V +N+P  W+V +P+ +TN E+GTVS GDYG+GDSAAL+V++    G  +   K     +I K LAQKGDNQFQ+F++++V  G+ +       + DF+YELLTGAGF VER+GVA+V+ V     A++  TT++R K ++ +L++I +SFR Y+
Sbjct:   25 GPSVARRGALAGGASLVAAGLVSL-APAPALAYDLAKYNRKLDKLGLPPVAGIPDGFSPVLSSVNQDQSL------------IVQFNHPNAWLVVKPSVNTNGESGTVSAGDYGKGDSAALYVSDLPPGGDKAFYAK-----LIAKGLAQKGDNQFQNFRVRAVSPGSPNA------VVDFEYELLTGAGFTVERRGVAAVSGVAGKSQALLAVTTSARYKKLEPELRKIVDSFRVYD 238
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A6U3V0C4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3V0C4_9STRA)

HSP 1 Score: 149 bits (376), Expect = 9.850e-38
Identity = 84/200 (42.00%), Postives = 118/200 (59.00%), Query Frame = 3 
Query:  318 NKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKS-LVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAY 914
            N KL+S+ LPP+ + P+GF+ LVE YG            NR P LV++ +P  WIV  P+ D N E GT+  G+Y +GD+A  ++   S  V   S   K+  +  I +A++QKGD+ +Q FK+  V+    DY   +Y I DF+Y LLTGAGF V+R+GVASV   GN V  +  A+T  R K ++  L+ IA SFR Y
Sbjct:   70 NAKLASYGLPPIANVPSGFSPLVEVYGK---------GRNRTPLLVSFVHPLDWIVTLPSQDVNGEDGTIQAGEYAKGDTATFYILPDSGKVDNISEQPKDFFKNAISRAISQKGDSIYQDFKITKVEPVKGDYNNQQYVICDFKYTLLTGAGFEVDRQGVASVTSEGNAVEVLWTASTRQRYKKLEEGLRSIAGSFRVY 260
[Close]
BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A7R9WJF7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJF7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.800e-36
Identity = 94/238 (39.50%), Postives = 135/238 (56.72%), Query Frame = 3 
Query:  213 TRSEALGVVGAALLGAVVVTG---GAASPASAVSTADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFV-ANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAY 914
            +R    G VGAA  GAV  +    G  +PA A   +  N KL +  LP +   P+GF+ L+E +G  A         NR P LV + +P  W+V  P+ D N E GTV  G+YG+GD+A  FV  ++  V   +   K   E V++KA++QK  N +Q+FK+ +++     Y    Y I DF+Y+L+TGAGF V+RK VASV   G  V A+  A+TA R K ++  L++IA+SFR Y
Sbjct:   45 SRRRFFGTVGAAA-GAVATSSLLQGPVAPAHAAKLSKVNAKLEALGLPAMGKVPDGFSPLLELWGKGA---------NRFPLLVNFAHPLDWVVTTPSLDLNSEDGTVQAGEYGKGDTATFFVYEDEGNVADIASQPKSFFENVLQKAISQKSANIYQNFKVTNIQPTKGGYQDQTYMIVDFKYQLVTGAGFEVDRKAVASVTSQGKAVEALWCASTAVRYKKLEPALRDIASSFRVY 272
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BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A7S2RLR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLR6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.100e-36
Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 3 
Query:  312 DANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGN-NVAAVVGATTASRAKSVKAQLQEIANSFRAYEG 920
            D  +++  + +     AP+GF+ +V  YG             +DP LVT+N P GW+V RPN D N E GTVS+GDYG+GDSAALF+      G  +   KE  E ++   + QKG++  Q FKL+ ++    +     YY+ DF Y LLTGAGF V RKG  SV  VG+ +V A++GA+T  R K  +  L+E+A SFR Y G
Sbjct:   80 DFQRQMQGYGIKDYKQAPDGFSPVVGFYGRAV--------PGQDPLLVTYNSPSGWLVVRPNIDNNGEDGTVSSGDYGKGDSAALFIGPPLKGGSLADQPKEYFEKLVFAGVTQKGESMVQGFKLRKIQKLEAN-TETPYYLVDFTYTLLTGAGFEVNRKGTGSVTAVGDKSVQAMIGASTDVRFKKTEPLLREVAESFRVYGG 274
[Close]
BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Match: A0A1Z5JAJ1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAJ1_FISSO)

HSP 1 Score: 145 bits (365), Expect = 4.150e-36
Identity = 87/211 (41.23%), Postives = 124/211 (58.77%), Query Frame = 3 
Query:  288 PASAVS-TADANKKLSSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGWIVNRPNTDTNKEAGTVSTGDYGRGDSAALFV-ANKSLVGGNSLSNKETVEGVIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAY 914
            PA+AVS  +  + KL  + LPP+   P+GF  L+E YG            NR P LV++++P  W+V  P+ D N E GTV  GDYG+GD+A  FV ++   V   +   KE  E  + K++ QKG+N +Q+FK+   K      AG  Y +ADF+Y+LLTGAGF V+RKGVAS+   G  V  +  A+T++R K  +  L+ I +SFR Y
Sbjct:   69 PANAVSGVSKVDAKLRGYGLPPLGPVPDGFAPLLEIYGK---------GKNRFPILVSFSHPITWVVQTPSNDVNGEDGTVQAGDYGKGDTATFFVYSDPGHVNDIASQPKELFEKALMKSIGQKGENMYQNFKV--TKLVPVTKAGQTYVMADFKYQLLTGAGFEVDRKGVASITSEGPAVEVLWAASTSARFKKTEQNLRNIVDSFRCY 268
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig680.17867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI1_ECTSI1.050e-12367.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8Y2_9STRA5.420e-5642.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DCV0_9STRA2.820e-4543.26Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXP4_9STRA9.310e-4543.26Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A7S2V7M0_9STRA8.760e-4440.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YP05_AURAN1.830e-4039.92Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A6U3V0C4_9STRA9.850e-3842.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9WJF7_9STRA1.800e-3639.50Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2RLR6_9STRA2.100e-3641.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5JAJ1_FISSO4.150e-3641.23Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig680contigF-serratus_M_contig680:399063..405186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.4
Seed ortholog evalue5e-101
Seed eggNOG ortholog2880.D8LLI1
Hectar predicted targeting categorychloroplast
EggNOG OGs2C1GZ@1,2S4FV@2759
Ec32 ortholog descriptionMog1/PsbP, alpha/beta/alpha sandwich
Ec32 orthologEc-22_001060.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1526
Cds size903
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932086.1390078-UTR-F-serratus_M_contig680:399062..3996561622932086.1390078-UTR-F-serratus_M_contig680:399062..399656Fucus serratus maleUTRF-serratus_M_contig680 399063..399656 -
1690964140.2482426-UTR-F-serratus_M_contig680:399062..3996561690964140.2482426-UTR-F-serratus_M_contig680:399062..399656Fucus serratus maleUTRF-serratus_M_contig680 399063..399656 -
1622932086.3625586-UTR-F-serratus_M_contig680:405157..4051861622932086.3625586-UTR-F-serratus_M_contig680:405157..405186Fucus serratus maleUTRF-serratus_M_contig680 405158..405186 -
1690964140.358094-UTR-F-serratus_M_contig680:405157..4051861690964140.358094-UTR-F-serratus_M_contig680:405157..405186Fucus serratus maleUTRF-serratus_M_contig680 405158..405186 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932086.1725497-CDS-F-serratus_M_contig680:399656..3997761622932086.1725497-CDS-F-serratus_M_contig680:399656..399776Fucus serratus maleCDSF-serratus_M_contig680 399657..399776 -
1690964140.266984-CDS-F-serratus_M_contig680:399656..3997761690964140.266984-CDS-F-serratus_M_contig680:399656..399776Fucus serratus maleCDSF-serratus_M_contig680 399657..399776 -
1622932086.201207-CDS-F-serratus_M_contig680:400272..4003721622932086.201207-CDS-F-serratus_M_contig680:400272..400372Fucus serratus maleCDSF-serratus_M_contig680 400273..400372 -
1690964140.2773488-CDS-F-serratus_M_contig680:400272..4003721690964140.2773488-CDS-F-serratus_M_contig680:400272..400372Fucus serratus maleCDSF-serratus_M_contig680 400273..400372 -
1622932086.2260022-CDS-F-serratus_M_contig680:400770..4008261622932086.2260022-CDS-F-serratus_M_contig680:400770..400826Fucus serratus maleCDSF-serratus_M_contig680 400771..400826 -
1690964140.288211-CDS-F-serratus_M_contig680:400770..4008261690964140.288211-CDS-F-serratus_M_contig680:400770..400826Fucus serratus maleCDSF-serratus_M_contig680 400771..400826 -
1622932086.2535632-CDS-F-serratus_M_contig680:401512..4017081622932086.2535632-CDS-F-serratus_M_contig680:401512..401708Fucus serratus maleCDSF-serratus_M_contig680 401513..401708 -
1690964140.2988858-CDS-F-serratus_M_contig680:401512..4017081690964140.2988858-CDS-F-serratus_M_contig680:401512..401708Fucus serratus maleCDSF-serratus_M_contig680 401513..401708 -
1622932086.2811646-CDS-F-serratus_M_contig680:401957..4020831622932086.2811646-CDS-F-serratus_M_contig680:401957..402083Fucus serratus maleCDSF-serratus_M_contig680 401958..402083 -
1690964140.312603-CDS-F-serratus_M_contig680:401957..4020831690964140.312603-CDS-F-serratus_M_contig680:401957..402083Fucus serratus maleCDSF-serratus_M_contig680 401958..402083 -
1622932086.30593-CDS-F-serratus_M_contig680:402697..4028831622932086.30593-CDS-F-serratus_M_contig680:402697..402883Fucus serratus maleCDSF-serratus_M_contig680 402698..402883 -
1690964140.3254936-CDS-F-serratus_M_contig680:402697..4028831690964140.3254936-CDS-F-serratus_M_contig680:402697..402883Fucus serratus maleCDSF-serratus_M_contig680 402698..402883 -
1622932086.3377223-CDS-F-serratus_M_contig680:405038..4051571622932086.3377223-CDS-F-serratus_M_contig680:405038..405157Fucus serratus maleCDSF-serratus_M_contig680 405039..405157 -
1690964140.3462994-CDS-F-serratus_M_contig680:405038..4051571690964140.3462994-CDS-F-serratus_M_contig680:405038..405157Fucus serratus maleCDSF-serratus_M_contig680 405039..405157 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig680.17867.1prot_F-serratus_M_contig680.17867.1Fucus serratus malepolypeptideF-serratus_M_contig680 399657..405157 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig680.17867.1

>prot_F-serratus_M_contig680.17867.1 ID=prot_F-serratus_M_contig680.17867.1|Name=mRNA_F-serratus_M_contig680.17867.1|organism=Fucus serratus male|type=polypeptide|length=301bp
MKAIMVATCGYLSLGRSHAFVTPGVAFPPAMPATSQKVREFMSMAAAPGS
GAAPVTVGGPTTRSEALGVVGAALLGAVVVTGGAASPASAVSTADANKKL
SSFDLPPVVDAPNGFNTLVEGYGMDAGLKNTLGSSNRDPFLVTWNYPKGW
IVNRPNTDTNKEAGTVSTGDYGRGDSAALFVANKSLVGGNSLSNKETVEG
VIKKALAQKGDNQFQSFKLKSVKAGATDYAGNKYYIADFQYELLTGAGFI
VERKGVASVAEVGNNVAAVVGATTASRAKSVKAQLQEIANSFRAYEGKFS
*
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mRNA from alignment at F-serratus_M_contig680:399063..405186-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig680.17867.1 ID=mRNA_F-serratus_M_contig680.17867.1|Name=mRNA_F-serratus_M_contig680.17867.1|organism=Fucus serratus male|type=mRNA|length=6124bp|location=Sequence derived from alignment at F-serratus_M_contig680:399063..405186- (Fucus serratus male)
GCGGTTAAAGCAAATCCGAAAACTATCAAATGAAGGCGATCATGGTGGCA
ACGTGCGGATATCTGTCGCTTGGTAGAAGTCACGCATTCGTGACGCCAGG
TGTTGCCTTCCCTCCGGCAATGCCAGCAACGTCGCAGAAGGTGAGAGAGC
TTTCCGACATCGTTCTTCGACCACAGACATGAATGAGCATTTTATTGCAA
GCGGTTGTTAGTGCGCAGCCTCGCGGACTACAAGTACAGAGTCTGAGATG
CCTCTGACGGCCGAGACGGGGGGATACCCTAAGAGATATTGATGTATAAT
GAAATAGGTGTTGTGATTGTTGATGCAACCTTTGCCTCTTGGCAGGGCCC
GTAAGGTGCCCCAACGTCAAAATCAAGGTCATCGTGAGAGTACACAACTG
ATCTACAGCAGTAGGTGTATTGTACGTATAATAAAATCAATTTTACTTCT
AAATAGAAACGAAAAATGCAAGTACACGTGACCCACACTTATTTTTGAAG
AAAATACAGAACGCACCTACTTGTAGACCTTATTGTTGTGATAAGGTTAC
AAATACACCACAGGGCAAAAGTCGATTGACAATTTAGACTATAAGTTTTT
AAATGCCACGAATGGGTTTGGTATTTGCGGCCTTTCCAGCCTTTGATCCC
ACCTAAACGTTTTGACAGTTTTTCTTCTGACTGGAGGATGCTCAGAAGGT
ATAGGCGGGTTCTGTTTTTTCTTTAAACACTCTCCACCCACATAATTTGA
CTATCCGGTGATCAAGCGAACTCGTTATTAATTCGATAAAGCTTTGAGTG
TAGGAGGCGTAATCGCTTTCTTTTCCATACGGAGAGCATAAGAGTACCGG
CCTTTTTTTTTCATCCCCAACCGATATTCGGCCCAGGAATTCGGTGAGGT
AAATAAGCTAGCTCAGCGGGGTTCGAACCCGGTCCCAGCCGACGCCAGTG
TGATAAGGTTGCTATTAATATTACACCACGGGGTAAAAGTTAGTTGAAAA
TTACCACTCGGTAATCAGTCTTTATAACAATTTACCATAGAGGAACCCGT
TTAAATGCCATGAAGAGGTTTTGTATTTGCAGCCTATGGTTATCCCACCT
AAACGTTTTAACGTTTTCCCCACCTGACTGGGGTACAGTATGCTCAGAAG
GTCTAGATGCATTCATATTTTTCGTTATACTCTGTACTGTACAAGTATAA
CATACCCATCGAGAACCCTATCCGGCCATTTTAGCGCTGAAGTGAGGGGC
AGATCAAGATACACTGCTCTGGTACTCTGTCCACATACAAAATCGTTCGT
ACAGACGGCACTTGTATCGGAACCAAGCGCGTGGCGACCGAAAATTGGGC
ACTTGGGGGGCAGCAGCAATAGAAAAGCAAGACGCGACTGTTGCATCGAC
GCTATTTTCAATGTAAAGTTGCGATGCTGCACTAGGCTGCCGTCAGGACG
CATCTTCCGAGTACAGATAAACGCATGAGCACTCGTACTTCTGACACTAC
AAACGCGTTGCTGGTACGTTCTACACGCCATCTTTAGAACATCGTTTTGT
TCTCCACAAGATAATGCAACAGAGCTGCATCCGAGTACGTGTCACCCGTA
CGAATGTCATGCTCCCCGAGTGTTGTCGACCGGGACCTCGTTGAGGCAGA
GTTCTTCAGCCCTGTACATAGAGCGACAAGAAAGATAAGCCCGGCAGAGC
GATCAACACCTGATTCAATCTCTTCTGTTATTACGTTTCTTGGCCGTCCA
GAAGCGATCTAGGAACGTGAACATGGCGAAGATATTTCCCCAACGAATAA
TGTGTTTAAATGGTTCGTGGCCTCACCCCTCTGGCCCGTCTGCTACCCTC
CCCCTCGCTTGCGTTTGCTTCTTCTTTGCCCCGACATACGGTCGCAATTC
TGGCTCAGGCAAGCAGCAGGTGACACGCTGCCATGATAGCGTACGGAATA
CGGTAGATCACGGGACGAGGGGCAGTCCCCGAAGAGACCCTCTACGCGGC
GTACGAAGGCCTTGCGAATCGCGGGCACCATTACCGATGCTGAAACCAAG
TACTGTACAGTACATGGGTCATAGCCTTGGAAAACGTAGGCAAGCAAAAT
GCCTGCGAGGTAGTGTGGCCCTCTCTACGCTCACGACTACTGTGCCCGCG
TTTTGATGGTAGGAGTGAAGGTGGCAGCAGTTGGGACGATTTCTCTATCG
CATAGACGTGGGCGTTCCTGGGCCATCAAACCTAATGCTAACGCTGCCAG
TGCACCTTTGTTTTGGGCTCCGAACCCGAACCCGCTCGCTCGTTGATGGA
AAGGTTCATGAGCATGGCGGCGGCACCAGGGTCGGGAGCGGCGCCGGTGA
CAGTAGGTGGACCTACGACGCGCTCGGAGGCTCTGGGGGTAGTAGGCGCC
GCCCTTCTTGGAGCAGTAGTGGTCACCGGTGGCGCGGCGTCTCCGGCCAG
CGCGGTGTCGACCGCCGACGCCAACAAAAAGCTATCCTCGTGAGTGTTTG
ATAATGCCTTCGCGATCCGCGTTTTCCTCAAAGAAAATGGTGAACTTAGC
GTGTAACGATGGAAGAGCGTTTCATTGACGAGACAACTGGTGTTTGTTTT
CCACTTCTACCTTGTTGATGAAGGTTTCAAGCACATTTCTACACGGGTGT
CTTTCCCGAGCTGGGAAACAGCTCACCCCAAGCTAATTGCTAGCGGTTGC
TACGTTGCTACGCATGCCTTGTGCGCACGACTTCATGCTCGACAACTACC
TGGCGAGGACCGAGAGCTACCTAATTGCCACCACGTTTCGTGCTGACGTT
ATTCAGTAACATCTTCGCAAGAGCGTGTAGAGCTCCGAATCAGCAGGATC
CTCGAATGCGCATTTCGACCGATGTGCGCTGGTTGTCGGTACGCGCTCTA
TTGCGCAAAGCAGAGGTTTGGACCGGGGTACGCCGGCTAGCACGCATACT
TGGTGCCTGCACCGGCTTCGTCCCGCGCGACTGAACCATAGTATGTTTCC
CTTTCTATTACGGAATGTGAGGACCTCGGTGGCGACCCGCTCGTGCATCG
TCTCGCTTCTCCCTTGTTTGCAACTCCGCTCCGCTCCCACACGATTTACG
CAGATTTGATCTTCCTCCAGTGGTGGACGCCCCAAACGGCTTCAACACGT
TGGTAGAAGGGTACGGAATGGACGCCGGCCTCAAGAACACTCTGGGCTCC
AGCAACCGAGACCCATTCCTAGTGACCTGGTGAGCGATCCGTCGAATACC
GTGCCAGGATGACATACGCTCCTGACGGCGAGGAGTGACCCTAAATTACT
GAAATGGGTACGCGTCGTACTGGGCAATTGTGGGGGGATCCTCGACAGTG
CAATCGTCGGGCAAGCATCCATACTTCACACCCCTCATCAGCTGGGACGC
ATAGATCATCACGTTCCCCGGATAGACGCTCTAGCTCCCCATGACCACAA
TGGCTCGCTCGCATGCTCAACGACGCAGGAACTACCCCAAGGGATGGATC
GTGAATCGACCCAACACTGATACGAACAAGGAGGCGGGCACCGTGTCAAC
GGGGGACTACGGCAGGGGCGACTCCGCGGCGCTTTTCGTAGCGAATAAGT
CGCTCGTGGGCGGCAATAGCCTATCGAACAAGGAAACGGTGGAAGGTGTC
ATCAAGAAAGCGTTGGCGCAAAAGGTGCTGAAACCGGGCTTCTGCCGCGA
CGGCGGGGAGTCACAGTAAGCTACTCGTTGTTTGGGAAGAAACAACTTCT
CTCTGGAGGATCCGCCGTCTAGAAAGGGGCGACGGCCGCCTCTGCCATCA
CTACCCCTCCCGCCGCCAGTAAACGAACTGTCCCAGAACTTGTTTGGGAT
CATTGTGCGGATGGCGACGCTACCGAGGCATTGTGGCGAACACGTTGGTT
GCTGTTCCGCGATCCTAGCCCTGCATACTCGCCCGTATTTTCTCGTGTGC
AGCTTGCTTTGAGCCTCCGTCGCTGCGATAGGTCTATACGCGCTAACCAT
GGCGTATCGAAGTATCTACATAAAGGCATGGTTCGCCATGACGCCATAGT
TTGAGGGGGTTTGCGACGTTTCCTTAGCGGTCCTCGTTTTGCCTAGTTTT
GTGTATTCCGGTACCTGCATCGATTTTCGGCAGTTACAAATGTTCTATCG
AGGCGATACAAATGGTTTACCTGATAAAGCTGTCTCGCAAAAAGGCACGT
ACGCCATGCTTTACTTTATTTTGGCCGCTTGCAAGAGCGGTAGGGCGAGA
TAAACCTGACTGCCTCCGCAGTTCTTTTTTTCGGAAGCTTTGTTGACCGG
CGCGGCCCGAAACCTGTACGTCCAATCTCGTGTCCCTCCGTTTGCTCGGC
TGAGCCACAGGGCGACAATCAGTTCCAGAGCTTCAAGCTCAAGAGCGTCA
AGGCGGGCGCTACCGAGTGAGCCCGCTGGTTTCTATTGGGCAAAATAGGA
ACTGCCAACTCTCCCCCCTACCTCCGAAAAAACAATCCTTGGCACGGAGT
GGTGCAGACTATCTAAGTCCTTCCAAATTCAACCTTTCCGTCATTTCAAA
CATTTTTCGTGAAAACCCTCTCACCGCGCTCCAAACTCTTTCCGTTCAGC
GCATGCAGTACTCTGATGATATGCCGGGTTGAGGCTCGAGTCGTTTCTGG
CCCGCTTTCGGGGACCTCGTGCATTCCCCACTGACAATTCTACTCTTTAC
TCCGCCGCCCCCCCGATGCTCTTTTCTGTGCATGTCTGCTGGACTGTGAC
GCCCGGGTTCTCTTGTGGTTACCCGACGTTCCCGCGGTACATGTGCGCGT
GGTTGTCGTGACAGCTACGCGGGGAACAAGTACTACATCGCTGACTTTCA
GTACGAGCTCCTGACCGGGGCGGGCTTCATCGTAGAACGCAAGGGCGTTG
CTTCCGTCGCTGAGGTGCGAGACCTGGGCGTCGCAAGCATGGGCCACACT
GGTCGATGCGCACGAAGCGCAAACATTTCTAAAGTAGCCCGTTGGCATCG
TGTCGGTCCCCCGAAATGTGCTTTGGTCATGCTCAAACCGACAGGAGCGA
GGTTCTAAAACTGAAACGTGAGAAAATGCGGAGGGTTCAACGTGTGCATG
GCCGGGTTTGCTTGCTGGCACCGGCTGCAGGAGGCGAGCCTCGAGATGTG
CACGAAGTCCCGCTCTGGAAGGAGTGCGCATAGTTTGTAGCGGCTTCTAC
CTTTATGACCACGGACTTGATCGTTAACGTGGCCGTCGCTGCGCAGCACT
AGGGATTTACTGACGTTTGACGGTGGCCTTGGTTAGTGATTCGATCGATT
TCGGTACCGTACGTGCAGCATAGTTTTCCCTCGGTTTCGGGAACGCTCAG
CTTCGCATCGGCCGTTCGACTACCTCCCCATATCCCTCGCCACGTGTGTT
GCCTGATCAGGTGGGAAATAACGTGGCGGCGGTGGTCGGGGCGACGACAG
CCAGTCGCGCGAAGAGCGTCAAGGCCCAGCTGCAGGAGATCGCCAACAGC
TTCCGCGCGTACGAAGGAAAGTTCAGCTGAAGCCTGCTGACGCGCTGGAG
GCTGCCCGATGTCCGAAGACGAGGCCGACGGTCACCTTTCAGCAGAAGTA
ATCTGGGAGGAACTATAGTTTGATTCGAGGAGGTGCGGTTTTTAAGCCTT
GGGAGAGCGTGTCGAGGATCGCAAGTCCGCTTGCTCGGCCCGATCGACCC
CGGCATGAGTGATGGCATTTTCTTTTCAGTAGGTCGTCTATCGGGCAACA
CGAGCCAAACTAGAAAGCTGTCCGTCTTTGGGTGAAACACAAACCTTAAG
TGACGCCGACGCCGGGGAAACGCCGCGGCATGGTAACGAGCGGCCCGTGA
CTGCGTTGCGTCAAGCGGAGTGAGAAACGAAGGCGTTTGTAAGACACACC
CAATTGTGAATTCGTGCGGGCTTTCCAAGTACCGCTATGCATGTATACTG
TGGGATATCCACCGATTGTGAAGAGATTCGTAACAAGAAATAGAGTGGGG
AATGGTCTAGATCCCAATTTTCGGCAGCTGTTTTACGTGGGTCACACGCG
AGATTTTACTCCAATACGTTTCCCTCGCAACAAAAAACGGAATTCTAGAT
GGTGCTCGACGCGCGGTGTTTGTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig680:399063..405186-

>mRNA_F-serratus_M_contig680.17867.1 ID=mRNA_F-serratus_M_contig680.17867.1|Name=mRNA_F-serratus_M_contig680.17867.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig680:399063..405186- (Fucus serratus male)
ATGAAGGCGATCATGGTGGCAACGTGCGGATATCTGTCGCTTGGTAGAAG
TCACGCATTCGTGACGCCAGGTGTTGCCTTCCCTCCGGCAATGCCAGCAA
CGTCGCAGAAGGTGAGAGAATGAAGGCGATCATGGTGGCAACGTGCGGAT
ATCTGTCGCTTGGTAGAAGTCACGCATTCGTGACGCCAGGTGTTGCCTTC
CCTCCGGCAATGCCAGCAACGTCGCAGAAGGTGAGAGAGTTCATGAGCAT
GGCGGCGGCACCAGGGTCGGGAGCGGCGCCGGTGACAGTAGGTGGACCTA
CGACGCGCTCGGAGGCTCTGGGGGTAGTAGGCGCCGCCCTTCTTGGAGCA
GTAGTGGTCACCGGTGGCGCGGCGTCTCCGGCCAGCGCGGTGTCGACCGC
CGACGCCAACAAAAAGCTATCCTCGTTCATGAGCATGGCGGCGGCACCAG
GGTCGGGAGCGGCGCCGGTGACAGTAGGTGGACCTACGACGCGCTCGGAG
GCTCTGGGGGTAGTAGGCGCCGCCCTTCTTGGAGCAGTAGTGGTCACCGG
TGGCGCGGCGTCTCCGGCCAGCGCGGTGTCGACCGCCGACGCCAACAAAA
AGCTATCCTCATTTGATCTTCCTCCAGTGGTGGACGCCCCAAACGGCTTC
AACACGTTGGTAGAAGGGTACGGAATGGACGCCGGCCTCAAGAACACTCT
GGGCTCCAGCAACCGAGACCCATTCCTAGTGACCTGATTTGATCTTCCTC
CAGTGGTGGACGCCCCAAACGGCTTCAACACGTTGGTAGAAGGGTACGGA
ATGGACGCCGGCCTCAAGAACACTCTGGGCTCCAGCAACCGAGACCCATT
CCTAGTGACCTGGAACTACCCCAAGGGATGGATCGTGAATCGACCCAACA
CTGATACGAACAAGGAGGCGGGCACCGTGTCAACGGGGGACTACGGCAGG
GGCGACTCCGCGGCGCTTTTCGTAGCGAATAAGTCGCTCGTGGGCGGCAA
TAGCCTATCGAACAAGGAAACGGTGGAAGGTGTCATCAAGAAAGCGTTGG
CGCAAAAGGAACTACCCCAAGGGATGGATCGTGAATCGACCCAACACTGA
TACGAACAAGGAGGCGGGCACCGTGTCAACGGGGGACTACGGCAGGGGCG
ACTCCGCGGCGCTTTTCGTAGCGAATAAGTCGCTCGTGGGCGGCAATAGC
CTATCGAACAAGGAAACGGTGGAAGGTGTCATCAAGAAAGCGTTGGCGCA
AAAGGGCGACAATCAGTTCCAGAGCTTCAAGCTCAAGAGCGTCAAGGCGG
GCGCTACCGAGGCGACAATCAGTTCCAGAGCTTCAAGCTCAAGAGCGTCA
AGGCGGGCGCTACCGACTACGCGGGGAACAAGTACTACATCGCTGACTTT
CAGTACGAGCTCCTGACCGGGGCGGGCTTCATCGTAGAACGCAAGGGCGT
TGCTTCCGTCGCTGAGCTACGCGGGGAACAAGTACTACATCGCTGACTTT
CAGTACGAGCTCCTGACCGGGGCGGGCTTCATCGTAGAACGCAAGGGCGT
TGCTTCCGTCGCTGAGGTGGGAAATAACGTGGCGGCGGTGGTCGGGGCGA
CGACAGCCAGTCGCGCGAAGAGCGTCAAGGCCCAGCTGCAGGAGATCGCC
AACAGCTTCCGCGCGTACGAAGGAAAGTTCAGCTGAGTGGGAAATAACGT
GGCGGCGGTGGTCGGGGCGACGACAGCCAGTCGCGCGAAGAGCGTCAAGG
CCCAGCTGCAGGAGATCGCCAACAGCTTCCGCGCGTACGAAGGAAAGTTC
AGCTGA
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