mRNA_F-serratus_M_contig680.17864.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Match: A0A6H5KSF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF2_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.140e-61 Identity = 121/255 (47.45%), Postives = 152/255 (59.61%), Query Frame = 3
Query: 456 AEGEELEWAGGVPVSSRFTL------GGVELSAVDSLCGEVGSTT---LVVASSDGVVRTLVGPIQRNCGRFAELHEDTIFSIYELLGYRSSQVLGYVNRTMAVIRAKLRLEWRLFPLTQGYLAKIKLEFLRWGRSSAGQGLPGRGTAVDASGVRLCNDFLTTSKCSRPACPYSHEQPWIQNDVLQDDDACILFRGGVTHALNDLHGQVFVWEWEGDLYRLFCERSMSKTLVNRRDPLTLGMYGAEVIRECVEEE 1193
A G ++W G PVS+RF G ++ D C G T +VV +SDG+VR L GP R+CG F L ED + SI ELLGYRSSQVLG+VN TMA +R++LR EWRL PLT G+LAK LEFL+WGR G +N+ DACI+FRGGVTHA+N+L+GQVF WEWEG+LYRLF ERS+ +T+V RRDP+TLG++GAEV+R+CV E
Sbjct: 64 ANGGAMDWGTGTPVSARFARLKTVDRGSGQIPVSDDECPHAGLVTTASIVVGASDGIVRFLGGPKMRHCGSFVSLSEDDVLSILELLGYRSSQVLGHVNHTMADLRSRLRREWRLHPLTPGHLAKRTLEFLQWGRIGPGS----------------------------------------KNNA----DACIVFRGGVTHAVNNLYGQVFGWEWEGELYRLFRERSLLRTIVTRRDPMTLGIHGAEVVRDCVVSE 274
BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Match: D7G5H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H9_ECTSI) HSP 1 Score: 217 bits (553), Expect = 4.210e-61 Identity = 121/256 (47.27%), Postives = 156/256 (60.94%), Query Frame = 3
Query: 456 AEGEELEWAGGVPVSSRFTLGGVELSAVDSLCGE-------------VGSTTLVVASSDGVVRTLVGPIQRNCGRFAELHEDTIFSIYELLGYRSSQVLGYVNRTMAVIRAKLRLEWRLFPLTQGYLAKIKLEFLRWGRSSAGQGLPGRGTAVDASGVRLCNDFLTTSKCSRPACPYSHEQPWIQNDVLQDDDACILFRGGVTHALNDLHGQVFVWEWEGDLYRLFCERSMSKTLVNRRDPLTLGMYGAEVIRECV 1184
A+G ++W G PVS+RF L AVD G+ V +T++VV +SDG+VR L GP R+CG F L ED + SI ELLGYRSSQVLG+VN TMA +R++LR EWRL PLT G+LAK LEFL+WGR +D P +N+ DACI+FRGGVTHA+N+L+GQ+F WEWEG+LYRLF ERS+ +++V RRDP+TLG+ GAEV+R+CV
Sbjct: 33 ADGGAMDWGTGTPVSARFA----RLKAVDRGSGQIPVSDDESPHAGLVTTTSIVVGTSDGIVRFLGGPKMRHCGSFVSLSEDDVLSILELLGYRSSQVLGHVNHTMANLRSRLRREWRLHPLTPGHLAKRTLEFLQWGR-------------ID---------------------------PGSKNNA----DACIVFRGGVTHAVNNLYGQIFGWEWEGELYRLFRERSLLRSVVTRRDPMTLGIQGAEVVRDCV 240 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig680.17864.1 >prot_F-serratus_M_contig680.17864.1 ID=prot_F-serratus_M_contig680.17864.1|Name=mRNA_F-serratus_M_contig680.17864.1|organism=Fucus serratus male|type=polypeptide|length=574bp MGSEKCPNTIQCNSEPAALCCIGPGRSSLCYDPPLTHHSIEGLLRPCSVSback to top mRNA from alignment at F-serratus_M_contig680:365797..370257- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig680.17864.1 ID=mRNA_F-serratus_M_contig680.17864.1|Name=mRNA_F-serratus_M_contig680.17864.1|organism=Fucus serratus male|type=mRNA|length=4461bp|location=Sequence derived from alignment at F-serratus_M_contig680:365797..370257- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig680:365797..370257- >mRNA_F-serratus_M_contig680.17864.1 ID=mRNA_F-serratus_M_contig680.17864.1|Name=mRNA_F-serratus_M_contig680.17864.1|organism=Fucus serratus male|type=CDS|length=3444bp|location=Sequence derived from alignment at F-serratus_M_contig680:365797..370257- (Fucus serratus male)back to top |