mRNA_F-serratus_M_contig680.17858.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI) HSP 1 Score: 488 bits (1256), Expect = 4.990e-150 Identity = 347/831 (41.76%), Postives = 471/831 (56.68%), Query Frame = 1
Query: 532 VNRMVAAKKRREIGQPERRKTIVMARTLEMQQLQLAIEARVTSDDLEQATNANTDKIVALQSSFDSALSDSFRRVQEMVHSQMGGLVQMVQQLVEQQAEFKRS--FDDFEAMISPGGFGDGSEE-------SEEPNPFIQAITNVVRKLLVEIE---KDRTPEINPGDFNALQEDYEVFKEYTE---DRRDAMSALLDDARARLEEAEKAVTCTSEKKSELENLAREALSLATDSSNE---------------------CASIRALVGVVKQESLLEARLEAESMVDRAEERAKGDVQNARDEARMATEILTMELRQHIKQAMDEMETQKAAILEAKTMSEEAISDAAAAVALAKEGEYSILQAEKCLGERLDDAAEKQAAAIAAIYDRMVMDNAELNRVEDQLQRLVTTKEEEISDVRNELARLEISAKTKTANLRKEVQDTFASMLLDEGMASGGHQG---------AALSGVPSGTRPSDGSVL-----GSGVG--------IDPEVTD-----LVCLGEALRKQEDDMVQKVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATVSRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAFVPTVAGGTGSTPVGGIIGAGIEPQYLPEENSHIIKDVFRPQISNGRRPGLQLPSCS-SVDPFEVQPSTIGSITNGDRLPAGSPHVFRGGFKLPKPQTSAAH 2832
+ + ++ KRRE Q R KT +A+++E++++Q+AIE+RVTSDDL+ A +A DKIVA+QSS +SALSD FRR+Q++VH QM L+ MVQ L + QA K S + + +S GG+ + E F +A+ + V ++L E ++ DF +LQEDY DR+DA+S+ L+DA+ E ++ +E ELE+ +++ CA++R LVG ++E +AR EAE++ RA ATE + EL++HIK++ DE E + A+ + +SE+A++ A AA A A E + + +AE +G+RLD A + Q AI +R+ +EL R E +L+RL+ + EI D+R + L S++ T LR+EVQD +M++D+ G+ S G V G G G +D +D L LG ALR+Q +D Q V TLQRSSVGIV++LRK++ G+H LSTKDLFWKA+++KL AH++AVG+VCLDVE+ATVSRRSRITL KEAQACLAG+MQRVAKL+AVKADYEVIREL+KL+ PE DWDERVE+LRQ ++RF+ CR+ALDK APE RTNF GEEIRGKF KL DALKVALSK+SPTTPG TLFGKIKLK NSHI KD FRP S+GR L PS S S++ FE S+I S+ +G R + SPHV+RGGFKLPK S H
Sbjct: 149 LEALASSCKRREKAQGIREKTNALAQSMEIKRIQMAIESRVTSDDLQLAVSAADDKIVAVQSSVESALSDRFRRMQDVVHQQMASLLSMVQGLTQSQARRKGSGPYVNARGNLSGGGYXXXXXXXXXXXXXASEAETFNKAVKDAVERVLQEGRISGGSGQGDVKMADFESLQEDYXXXXXXXXEKADRQDAISSSLEDAQXXXXXXEANLSALAE---ELEHSSQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAALRLLVGDSRREGQADARQEAEAITARAXXXXXXXXXXXXXXXXSATEKVGSELKRHIKKSEDEAEGFQGAVAGTRALSEKAMAGATAAAARADECDALLQKAETRMGKRLDKAVQNQTTAIEDTLERVAAGESELARAESELRRLIASNGAEIMDLRTGQSVLGESSEQATEQLREEVQDALTTMVIDQDFIDSPSSXXXXXXXXXRTGXXXXXXGSDNSRGGVRFEASHGGGSGNNYRSNDFVDRSASDVARLSLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLK----------------------------------------NSHITKDTFRPHTSHGR---LGSPSRSGSIELFEPH-SSIHSVMSGSRSSSHSPHVYRGGFKLPKHLKSPLH 932
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.780e-42 Identity = 132/334 (39.52%), Postives = 166/334 (49.70%), Query Frame = 1
Query: 1915 LRKQEDDMVQKVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATVSRRSRIT------------------LPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAFVPTVAGGTG---STPVGGIIGAGIEPQYLPEENSHIIKDVFRPQISNG---RRPGLQLP------SCSSVDPFEVQPSTIGSITNGDRLPAGS-----PHVFRGGFKLPK 2811
LR + + LQRS V LR+V+T L++K LFW++ +IKL AH + V V L VE A L +A LAGN QRVAKLIA KADYEVIR +S+ EDP HDWD RVE LR +L +F R L KRAP + E RG+F ++ AL+VALSK+ PTTPG TLFG++++ A+ACVACDR F T A G S P GG A +P LP E S +++ FRP G +R G + S P V P G +V+RGGFKLPK
Sbjct: 699 LRAHAAEGADALEALQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGP--AAEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFA-TAADGLPCAVSAPPGGNHAAA-KPPALPTETSIAVRNNFRPSTCTGSPTKRSGGGVEVNGDDGDVESEVPLHVAPFGFGXXXXXXXXXXSDVQKPQAYVYRGGFKLPK 1028
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK) HSP 1 Score: 141 bits (356), Expect = 5.850e-34 Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = 1
Query: 1960 QRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATVSRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAF 2532
+RSSVG+ ++ R+ + + +++K LFW+A++ +L+AH + GD C ++E A S +L EAQ LAGN QRVAKL+ +AD+E IR++S PE D DWD +V+ LRQKY F G K+ R + + R +F KL A+++ALSK + PGLTLFGK + AC+ACDR F
Sbjct: 39 ERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELE-ANSSAAHAFSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPE--DEDWDTKVDQLRQKYRAEFTQGVEAYAAKQ--HRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPF 224
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI) HSP 1 Score: 115 bits (288), Expect = 1.790e-22 Identity = 68/175 (38.86%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 1912 ALRKQEDDMVQKVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATVSRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKV 2436
A+R+Q+ + ++R+++ + +++K++ L VLS++DLFW+ + KL+AH +A D VE AT + R L E Q +AGN QRVAKLI KAD+EVI++L+ + E DWD RV+ +R +L+ FV R LD++ P G R +FFVKL LKV
Sbjct: 548 AVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVE-ATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPF--GARNRDRFFVKLEQGLKV 719
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: D7G4P4_ECTSI (Myosin-like antigen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P4_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.770e-21 Identity = 67/197 (34.01%), Postives = 112/197 (56.85%), Query Frame = 1
Query: 1945 KVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATVSRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAFV 2535
++ +L+RS+V +V+ +R++Q L L+TK+ W +E++ + H Q +G D+E A +L Q ++ Q VAK++A +ADYEV R+ ++P D DWD +VE LR +++ +FV + K P + EE+R F KL ++K+A+SK+ P G T+ GK+ L +C+ACDR F+
Sbjct: 150 RMTSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEP-FSLGPAMQKHVSAVSQMVAKIVATRADYEVTRQAVNRKNPGE-DSDWDRKVEELRIRFMNKFVSDVVQVASKLRPL--PDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHL-LPSCMACDRPFI 341
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: A0A6H5L1L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.840e-20 Identity = 95/335 (28.36%), Postives = 154/335 (45.97%), Query Frame = 1
Query: 1945 KVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATV---------------------SRRSR------ITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAFV-PTVAGGTGSTPVGGIIGAGIEPQYLPEENSHIIKDVFRPQIS-NGRRPGLQLPSCSSVDPFEVQPSTIGSI----TNGDRLPAGSPHVFRGGFKLPKPQTSA----AHPR 2838
++++L+RS+V +V+ +R++Q L L+TK+ W +E++ + H Q +G D+E A +RR ++L Q L+ Q VAK++A +ADYEV R+ ++P D DWD +VE LR +++ +FV + K P + EE+R F KL ++K+A+SK+ P G T+ GK+ L +C+ACDR F+ P + G + T G L + + + R NG LQ P F + S G + G R + +V R GFK+ + + AHPR
Sbjct: 196 RMVSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFRPHHHLTPLSSNEFLATRRKASAVCVPLSLSPAMQKHLSAVSQMVAKIVATRADYEVTRQAVNRKNPGE-DSDWDRKVEELRIRFMNKFVSDVVQVASKLRPL--PDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHL-LPSCMACDRPFIGPAIRGRSCKT-------IGESENVLESVPWNAVAGLQRGGAGVNGSPAALQQPHL-----FVCEASGCGRMCQSGNGGGRDRSPHKYVMRSGFKMRQSASEGGGLVAHPR 514
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: A0A7S1XP55_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP55_9STRA) HSP 1 Score: 100 bits (249), Expect = 7.160e-18 Identity = 100/364 (27.47%), Postives = 168/364 (46.15%), Query Frame = 1
Query: 1873 IDPEVTDLVCLGEALRKQEDDMVQKVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDVEEATV-SRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGEEIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKACVACDRAFVPTVAGGTGSTPVGGIIGAGIEPQYLPEENSHIIKDVFRPQISNGRRPGLQLPSCSSVDPFEVQPSTIGSITNGDRLPAGSPHVFRGGFKLPKPQTSAAHPRGRPSTSGVLD--KGPPSQGILLPNQGLYPFHSSEDDDSMDS 2955
+D + ++V AL++Q ++ ++ + ++ + ++L K+ +H+L TK + I +L A + + + L E ++ S + L +E + LA QR AKLIA KAD E+ R++ DP A DW+E + R + + ++ A A + + EIR K+ K+ ALK+A++K+S PG T G++KL+ +C+AC+R F + G + I LP +H D + + GL SV P P + S + S VFRGGFK+P+P+TSA+ G L+ G P+ +P P DD S++S
Sbjct: 241 VDSSIEEIV---GALKEQREESKEEFLRMEETQERESALLHKLDKNVHLLLTKSNKLELINERLRAEEAELVKIGLFSETRSLDSEYQQFKLGQELETKLATATQRTAKLIAAKADIEITRQVIPHADP--ATEDWEEMISDTRSRLVDT-IYTTVFAKQTEASKFPRDTVAMEIRQKYMDKVLMALKIAMTKYSNVQPGNTFLGRMKLQM-SCMACNRPFKESNTPGDQRS---------ISRDRLP---AHGRGDDDLSSVRSSASAGL-----GSVHP----PGSAMSFGSRGGSSQSSKFVFRGGFKIPRPKTSASLGMGSRGAVNTLNIPVGSPTPAPYVPPSSAIP-----DDVSVES 571
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Match: W7TB27_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB27_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 8.220e-16 Identity = 68/243 (27.98%), Postives = 123/243 (50.62%), Query Frame = 1
Query: 1861 SGVGIDPEVTDLVCLGEALRKQEDDMVQKVITLQRSSVGIVSILRKVQTGLHVLSTKDLFWKAIEIKLEAHKQAVGDVCLDV-----------EEATVSRRSRITLPKEAQACLAGNMQRVAKLIAVKADYEVIRELSKLEDPEHADHDWDERVEYLRQKYLQRFVHGCREALDKRAPERRTNFKGE-------EIRGKFFVKLFDALKVALSKHSPTTPGLTLFGKIKLKAKA-CVACDRAF 2532
+G+G DP + DL+ + R + D +++ L++ G+ ++ + L T+ W A++++L+ + +++ C + ++ + + L KE +A + R+AK IA+KADY++IR + +D D+ D ++ R+ YL RF+ G + A++ GE EI +F KL A+++ALSK S G +LFGKI L+A+A C+AC+R F
Sbjct: 66 AGLGPDPSIPDLLTQLDVQRTESTD---QLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDT-LTDNQCDAKILQSRETYLMRFLGGVKRAVE-------VGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQF 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig680.17858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig680.17858.1 >prot_F-serratus_M_contig680.17858.1 ID=prot_F-serratus_M_contig680.17858.1|Name=mRNA_F-serratus_M_contig680.17858.1|organism=Fucus serratus male|type=polypeptide|length=839bp MVAAKKRREIGQPERRKTIVMARTLEMQQLQLAIEARVTSDDLEQATNANback to top mRNA from alignment at F-serratus_M_contig680:222513..247542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig680.17858.1 ID=mRNA_F-serratus_M_contig680.17858.1|Name=mRNA_F-serratus_M_contig680.17858.1|organism=Fucus serratus male|type=mRNA|length=25030bp|location=Sequence derived from alignment at F-serratus_M_contig680:222513..247542- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig680:222513..247542- >mRNA_F-serratus_M_contig680.17858.1 ID=mRNA_F-serratus_M_contig680.17858.1|Name=mRNA_F-serratus_M_contig680.17858.1|organism=Fucus serratus male|type=CDS|length=5034bp|location=Sequence derived from alignment at F-serratus_M_contig680:222513..247542- (Fucus serratus male)back to top |