mRNA_F-serratus_M_contig679.17814.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.630e-45 Identity = 79/108 (73.15%), Postives = 94/108 (87.04%), Query Frame = 1
Query: 4 VLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
VLGQ DL+ FVDSHV EFEENFK +K +R+EA+KLP++IK+DCITVS+F FK CIEDQLQRLAD LT++LRN+VLSNFKAVD++LE SMEKL RRPRTI+DIGE
Sbjct: 248 VLGQVDLDSFVDSHVAAAQEFEENFKAVKIRRREAEKLPEIIKVDCITVSMFPFKACIEDQLQRLADALTVSLRNAVLSNFKAVDVFLEDSMEKLSRRPRTIDDIGEA 355
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A482SFB4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFB4_9ARCH) HSP 1 Score: 105 bits (263), Expect = 1.180e-26 Identity = 48/102 (47.06%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 22 LEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
++ +++ +V T+ E+ NFK++++KRK+ DKLPD+ +DC T+SL FK ++D L R ADVL + LR S++ FK VD YLE SMEKL +PRT+++IG+
Sbjct: 1 MDAYIEHNVKTSDEYVLNFKMLRAKRKDIDKLPDMENVDCCTISLVPFKSFLDDLLLRTADVLLINLRRSLIEEFKEVDQYLESSMEKLNTKPRTVDEIGDA 102
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A836CKL8_9STRA (DHC_N1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL8_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.410e-26 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 1 MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADK----LPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIG 321
+VLG +LE +VD V++ +F+ N K +++KRKEA+K LPD ++DC VSL K ++DQLQRL D L LALR VL+ FK VD +L ME+LGRRPRT+E+IG
Sbjct: 889 VVLGCVELEQYVDETVHSADDFDLNLKTLRAKRKEAEKASADLPDFARVDCFAVSLLPLKSAVDDQLQRLGDALLLALRKKVLTQFKEVDAFLAEGMERLGRRPRTVEEIG 999
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A7S1CH85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH85_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.070e-24 Identity = 50/110 (45.45%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 1 MVLGQA-DLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
+VLG+ DL+ +V+++V T +++ NFK +K +RKE +KLPD K+DC+TVS F+ +EDQ+QRL+D L L+LR S+ + K+V+ +LE +ME+L RP +I++IG+
Sbjct: 404 VVLGRVPDLDAYVEANVTTIAQWDANFKHLKLRRKECEKLPDFHKVDCVTVSAAPFRAAVEDQMQRLSDALVLSLRKSLSEHLKSVEDFLERAMERLNERPHSIDEIGKA 513
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A8J1XKT6_OWEFU (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XKT6_OWEFU) HSP 1 Score: 105 bits (261), Expect = 5.360e-24 Identity = 49/109 (44.95%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 1 MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
+VLG DL+ +V+S +++ ++E NFK +K++ ++A+KLP IK+DCITVS K ++D +QRL D L ALR S+ ++ A+D +L G+ME L RP+T+E+IGE
Sbjct: 859 VVLGALDLDEYVESQLHSLQDWERNFKALKARGRDAEKLPSQIKVDCITVSCNPVKAVVDDHIQRLFDSLLNALRKSITTDLGAIDTFLNGAMETLSARPQTVEEIGEA 967
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A6H5L423_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L423_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.800e-24 Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 130 KIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
++DCITVS+F K CIEDQLQRLAD LT++LRN+VLSNFKAVD +LE SMEKL RRPRTI DIGE
Sbjct: 42 QVDCITVSMFPLKACIEDQLQRLADALTVSLRNAVLSNFKAVDAFLEDSMEKLSRRPRTINDIGEA 107
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A3N0XR99_ANAGA (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XR99_ANAGA) HSP 1 Score: 103 bits (257), Expect = 1.860e-23 Identity = 46/109 (42.20%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
+VLGQ D++ V+ H+++ ++E NFK +K+K KEA++LP K+DCITV+ +V ++D +QRL D L +LR S+L + + +D ++ G+ME L RP +I++IGE
Sbjct: 860 VVLGQVDIDVLVEKHLHSVQDWERNFKALKAKGKEAERLPSTEKVDCITVNCEPVRVAVDDLIQRLFDALLTSLRRSILGHIQVIDSFVSGAMETLSLRPESIDEIGEA 968
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: UPI0015B077C5 (LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B077C5) HSP 1 Score: 103 bits (257), Expect = 1.860e-23 Identity = 48/109 (44.04%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
+VLGQ DLE V+ HV+T ++E NFK +K + KE+++LP K+DCITV+ K ++D +QRL D L L+LR S+ ++ + +D ++ G+ME L RP +I++IGE
Sbjct: 867 VVLGQVDLEALVERHVHTVQDWERNFKALKVRGKESERLPSTEKVDCITVNCDPVKAVVDDLIQRLFDALLLSLRKSIQAHTQDIDTFVTGAMETLSTRPESIDEIGEA 975
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A6G0IVU2_LARCR (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IVU2_LARCR) HSP 1 Score: 102 bits (255), Expect = 3.440e-23 Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIG 321
+VLGQ DLE V+ H+N+ ++E NFK +K++ KE+++LP K+DCITV+ K I+D +QRL D+L L+LR S+ + +A+D ++ SME L RP ++E+IG
Sbjct: 862 VVLGQVDLEKLVEKHLNSVQDWERNFKALKARGKESERLPSQEKVDCITVNCEPVKAIIDDHIQRLFDILLLSLRKSIQGHTQAIDSFVSESMETLSTRPESMEEIG 968
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Match: A0A2D4BHB6_PYTIN (Dynein heavy chain (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHB6_PYTIN) HSP 1 Score: 102 bits (254), Expect = 4.600e-23 Identity = 45/106 (42.45%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 10 GQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVSLFQFKVCIEDQLQRLADVLTLALRNSVLSNFKAVDLYLEGSMEKLGRRPRTIEDIGEV 327
G A+L+ +++ + ++E NFK +K+KRKE DK+PDV+++DC+ VSL FK ++D LQR D L L+LR S +++ + V+ +++ +MEKL RRP +IE+I +
Sbjct: 654 GGAELDTLLETTLQEPADWELNFKTLKAKRKETDKIPDVVRVDCVVVSLVAFKQALDDGLQRFQDALLLSLRKSTVAHLRGVEEFVDSAMEKLNRRPHSIEEISQA 759 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig679.17814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig679.17814.1 >prot_F-serratus_M_contig679.17814.1 ID=prot_F-serratus_M_contig679.17814.1|Name=mRNA_F-serratus_M_contig679.17814.1|organism=Fucus serratus male|type=polypeptide|length=110bp MVLGQADLEGFVDSHVNTTVEFEENFKVIKSKRKEADKLPDVIKIDCITVback to top mRNA from alignment at F-serratus_M_contig679:381792..382321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig679.17814.1 ID=mRNA_F-serratus_M_contig679.17814.1|Name=mRNA_F-serratus_M_contig679.17814.1|organism=Fucus serratus male|type=mRNA|length=530bp|location=Sequence derived from alignment at F-serratus_M_contig679:381792..382321- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig679:381792..382321- >mRNA_F-serratus_M_contig679.17814.1 ID=mRNA_F-serratus_M_contig679.17814.1|Name=mRNA_F-serratus_M_contig679.17814.1|organism=Fucus serratus male|type=CDS|length=660bp|location=Sequence derived from alignment at F-serratus_M_contig679:381792..382321- (Fucus serratus male)back to top |