mRNA_F-serratus_M_contig679.17805.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: A0A6H5L4X1_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X1_9PHAE) HSP 1 Score: 226 bits (575), Expect = 1.240e-56 Identity = 143/308 (46.43%), Postives = 169/308 (54.87%), Query Frame = 3
Query: 591 SSRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPAPVGTVIPPSSTFPSENIAFVATSTGGEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEARKKGRPRKATGLAELERYMACAQEAAKQVLQDDVQTEDPALQKKAVEATIVSDQSNEVSHSSSPVRAINLA--QASGRAEFKVKLKRELEATGGLHCESVGRASPAVRKVA 1508
+SRRPWTK DD+AVR LVA +GT+NWA+VEQ+M S +GI GRSGKQSRERWHNHLNP I K W+P+EE IM EAR +LGN WSEIAK LPGRTDNQVKN+ DGG + G++ E A RKKGRPRKATGLAELERYMACAQEAA+ VL D + +DP L+++ +E T+ S S PV A A ASGRA F+ KLK+ LE TGGLHC+ A P RK+A
Sbjct: 8 ASRRPWTKHDDNAVRELVAAHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHLNPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNHCK--------------DGG-------------------------------------------------KTKGGLNAEKGATA-------------CRKKGRPRKATGLAELERYMACAQEAAQAVLNDSGRPQDPILRQQGMEVTVTS-----APRGSPPVGASVAAIEMASGRAAFREKLKQNLEKTGGLHCQRTVAARPPHRKLA 234
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: D7FMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG3_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.280e-56 Identity = 145/308 (47.08%), Postives = 172/308 (55.84%), Query Frame = 3
Query: 594 SRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPAPVGTVIPPSSTFPSENIAFVATSTGGEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEARKKGRPRKATGLAELERYMACAQEAAKQVLQDDVQTEDPALQKK---AVEATIVSDQSNEVSHSSSPVRAINLAQASGRAEFKVKLKRELEATGGLHCESVGRASPAVRKVA 1508
SRRPWTK DD+AVR LVA +GT+NWA+VEQ+M S +GI GRSGKQSRERWHNHLNP I K W+P+EE IM EAR +LGN WSEIAK LPGRTDNQVKN+W DG GG+ G++ E A RKKGRPRKATGLAELERYMACAQEAA+ VL+D + +DP L+++ +E T+ S +S V AI +A SGRA F+ KLK+ LE TGGLHC+ A P RKVA
Sbjct: 22 SRRPWTKHDDNAVRELVATHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHLNPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNHW---------------DG-------------------------------------KNGGKSKG---------GLNTEKGATA-------------CRKKGRPRKATGLAELERYMACAQEAAQAVLKDSGRPQDPTLRQQNPQGMEVTVTSAPRGRPPVGAS-VAAIEMA--SGRAAFREKLKQNLEKTGGLHCQRTAAARPPHRKVA 252
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 196 bits (499), Expect = 5.810e-53 Identity = 126/279 (45.16%), Postives = 151/279 (54.12%), Query Frame = 3
Query: 459 DDKSSP-GTNSSDVIAMPAMGRRAEVYPYPMPAAVKPHRTAAKGG----SSRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPAPVGTVIPPSSTFPSENIAFVATSTGGEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEARKKGRP-RKATGLAELERYMACAQEAAKQVLQD 1277
D K+ P G SD R P P + A KG + RR WTK +D A+R LVAK+GTR+W+++ + + ++F I GR+GKQ RERWHNHL+P INKG W+PEEE IM EA LGN WSEIAK LPGRTDN VKN+WYSFMRRNVRRL REV G +P L PS AP G A +G G PD G +E KKGR RKA LAEL+RY A EAAK+VL++
Sbjct: 2 DTKAQPAGAKPSDAPPTEGAARAPAAKPXXXXXXEDPAKEAKKGKKETKNDRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVSEG-----IPGLDPSLAPGG--------------ARPKNGSGKNGAAVGPD-----GKPEEKP------------------KKGRSSRKAANLAELQRYFTAAIEAAKEVLEE 238
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 185 bits (469), Expect = 6.200e-47 Identity = 80/133 (60.15%), Postives = 104/133 (78.20%), Query Frame = 3
Query: 579 AKGGSSRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPAL 977
++ +RR W++ +DDA+RVLV ++GTR+WA +E+H+A+++ I GRSGKQ RERWHNHL+P I KG W+PEEE ++ + R +GN WSEIAK LPGRTDNQVKN+WYS MRRNVR L REV G Q LPA+
Sbjct: 11 SRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAI 143
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN) HSP 1 Score: 173 bits (439), Expect = 1.030e-45 Identity = 104/236 (44.07%), Postives = 129/236 (54.66%), Query Frame = 3
Query: 597 RRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLG-NCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPAPVGTVIP---PSSTFPSENIAFVATSTGGEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEARKKGRPRKATGLAELERYMACAQEAAKQVLQDDVQTE 1292
RR WT +D+A+R LV KYGTR+W+++ +H+ +F I GR+GKQ RERWHNHL+P INK W+ EEE IM +A LG N WSEIAK LPGRTDN VKN+WYSFMRRNVRRL REV+ G P+ VG V PS +F + P K+GR RKA LAEL+RY A EAA +VL +D ++
Sbjct: 7 RRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDG---------QPNHQHVGIVAKQARPSDSF--------------QAPP----------------------------------KRGRSRKAANLAELQRYFTAAAEAASEVLHEDTSSD 185
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN) HSP 1 Score: 169 bits (427), Expect = 4.490e-45 Identity = 72/118 (61.02%), Postives = 95/118 (80.51%), Query Frame = 3
Query: 597 RRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGG 950
RR W++ +D A++ LV +YGTR+W+++ +H+ S++ I+GR+GKQ RERWHNHL+P INK W+ +EE +M +A LGN WSEIAK LPGRTDN VKN+WYSFMRRNVRRL REV+ G
Sbjct: 6 RRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDG 123
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.010e-40 Identity = 105/258 (40.70%), Postives = 144/258 (55.81%), Query Frame = 3
Query: 585 GGSSRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPA-----PVGTVIP---PSSTFPSENIAF--------VATSTG-----GEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEA------RKKGRPRKATGLAELERYMACAQEAAKQVLQD 1277
G RR W++ +DDA+R LV ++GT+ W+ + + S++ I R+GKQ RERWHNHL+P I K PW+ EEE IM +A RLGN WSEI+K LPGRTDN +KN+WYS MRRNVRRL +EV G + P +P P+ T+ P P+S PS + + T +G + P T P + +S + + VT GEA +K RPR+A LAEL Y+ EAA +V+Q+
Sbjct: 10 GSGDRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDG-MPMSAPLATPQTKHKRKKPLATISPDDAPTSGLPSSSXXXXXXXXXXAMCTRSGLSFGKEDEPLTTP-IASNNNISRKRPSPIVTSTPATSNPAGEAGAPRKRARKERPRRAACLAELTEYIKTTAEAANEVVQE 265
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.940e-36 Identity = 95/244 (38.93%), Postives = 130/244 (53.28%), Query Frame = 3
Query: 543 PMPAAVKPHRTAAKGGS-SRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDGGTQSVELPALSPSPAPVGTVIPPSSTFPSENIAFVATSTGGEGPRTIPDVELTEGVSDESAARWVTHVGNEMMDMGEARKKGRPRKATGLAELERYMACAQEAAKQVL 1271
P P + K +AAK RR W+ +D+A+R LV + GT+ W+ + + + I GR+GKQ RERWHNHL+P+I K PWS EE + EA +LGN WSEI+K LPGRTDN +KN+WYS MRRNVRRL +EV ++P G E + P V+ + DE+ + V H G +M +K+ RKA LAEL+ Y+ EAA +V+
Sbjct: 24 PSPVSTKGVMSAAKSRQCDRRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEVWSHRD------MTPGDDTQGGKKRRKKRCKDELVT----------PHNYKPVKKRKISPDEAFVKKVAHKGKKM------KKERVGRKAASLAELQDYVKTTAEAAAEVM 245
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: A0A835ZL73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.790e-36 Identity = 75/135 (55.56%), Postives = 92/135 (68.15%), Query Frame = 3
Query: 549 PAAVKPHRTAAKGG--SSRRPWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRREVDG 947
P P T +GG +RR W+ +D A+R LV K G + W+ V M +E+ I GR+ KQ ERWHNHL+P I+K PW+P+EE +M +A LGN WSEIAK LPGRTDN VKN+WYS MRRNVRRL REV G
Sbjct: 20 PGGGTPESTDTQGGFCKARRSWSTKEDAAIRSLVDKLGMQAWSQVAAAMETEYAIFGRTSKQIWERWHNHLSPGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHWYSSMRRNVRRLTREVGG 154
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR) HSP 1 Score: 140 bits (352), Expect = 2.880e-35 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 3
Query: 603 PWTKADDDAVRVLVAKYGTRNWAMVEQHMASEFGIQGRSGKQSRERWHNHLNPDINKGPWSPEEEIIMREARTRLGNCWSEIAKHLPGRTDNQVKNYWYSFMRRNVRRLRRE 938
PWT+ +D+ V LV KYG + W+++ QH+ GR GKQ RERWHNHLNPDINKGPW+ EE+ I+ +A GN W++IAK LPGRTDN +KN+W S MRR + R RRE
Sbjct: 7 PWTQEEDNQVVELVKKYGAKKWSLIAQHLP------GRIGKQCRERWHNHLNPDINKGPWTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHWNSTMRRKMERERRE 112 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig679.17805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig679.17805.1 >prot_F-serratus_M_contig679.17805.1 ID=prot_F-serratus_M_contig679.17805.1|Name=mRNA_F-serratus_M_contig679.17805.1|organism=Fucus serratus male|type=polypeptide|length=673bp MFTWSPSAGLAMPQLVERISPSVMIPADDMIQSNPRLQNTGSPSSGSPDDback to top mRNA from alignment at F-serratus_M_contig679:281914..291006+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig679.17805.1 ID=mRNA_F-serratus_M_contig679.17805.1|Name=mRNA_F-serratus_M_contig679.17805.1|organism=Fucus serratus male|type=mRNA|length=9093bp|location=Sequence derived from alignment at F-serratus_M_contig679:281914..291006+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig679:281914..291006+ >mRNA_F-serratus_M_contig679.17805.1 ID=mRNA_F-serratus_M_contig679.17805.1|Name=mRNA_F-serratus_M_contig679.17805.1|organism=Fucus serratus male|type=CDS|length=4038bp|location=Sequence derived from alignment at F-serratus_M_contig679:281914..291006+ (Fucus serratus male)back to top |