mRNA_F-serratus_M_contig6773.17792.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6773.17792.1
Unique NamemRNA_F-serratus_M_contig6773.17792.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 4.230e-154
Identity = 212/235 (90.21%), Postives = 219/235 (93.19%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGFPCFHLHVLQDNKNIP 705
            VYSWGRGEDGQLGLGDTNDQD+PVLVDALK KGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPR+VEALEGQRIVQATCGSYHTAAVTD GELYTWGGGMYGKLGHGNESGHPTPC VKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQ K V QVAACGFHTAALT AG+IFTWGEG F     H ++ N+ +P
Sbjct:    9 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLG-HGMERNQMVP 242
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A7S1GDB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDB4_9STRA)

HSP 1 Score: 351 bits (900), Expect = 2.340e-119
Identity = 157/219 (71.69%), Postives = 184/219 (84.02%), Query Frame = 1 
Query:    4 YSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            Y+WGRGEDGQLGLGDT+DQ KPV+VD LK K V+Q+ACGSGHTVVL+++G V+TWGRGDDGRLGHGDNGWKYVPRVVEAL G R+ Q TCGSYHTAAVTD G LYTWGGGMYGKLGHGNE+GH  PC V  L   G  +T++ACGSRHTV LTD G+V++WGD +NGV GH + DGHQYLPR++  L+++  KQVAACGFHTA LT AG +++WGEG F
Sbjct:    1 YAWGRGEDGQLGLGDTSDQYKPVMVDILKDKNVMQIACGSGHTVVLTDEGQVFTWGRGDDGRLGHGDNGWKYVPRVVEALLGSRVTQVTCGSYHTAAVTDTGSLYTWGGGMYGKLGHGNENGHSRPCVVDVL--SGVHITEVACGSRHTVALTDKGEVFSWGDSDNGVCGHGDGDGHQYLPRLVAGLRSEAAKQVAACGFHTAVLTTAGQVWSWGEGKF 217
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC)

HSP 1 Score: 345 bits (886), Expect = 4.510e-116
Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            V++WGRGEDGQLGLGDT+DQD+P  VDAL+  GV Q+ACGSGHTVVL+ DG V+TWGRGDDGRLGHGDNGWKYVPR+ ++L GQ ++Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHG+E+GH TP  V+ L   GA V QIACGSRHT ++T  G +YTWGDKENGV GH   +GHQYLPR+LES+  K V Q++ACGFHTA +TDAG++FTWGEG F
Sbjct:    2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKF 219
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN)

HSP 1 Score: 342 bits (877), Expect = 5.740e-112
Identity = 157/218 (72.02%), Postives = 187/218 (85.78%), Query Frame = 1 
Query:    7 SWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            SWGRGEDGQLGLGDT+DQ +PVL+DAL  + VVQ+ACGSGHTVVL++DG VYTWGRGDDGRLGHGDNGWK+VPR+VE L G++I Q TCGSYHTAAVT  GEL+TWGGGMYGKLGHGNE+GH TPC V+ L+ +  R  Q+ACGSRHTVVL +   VYTWGDKE GV GH + DGHQYLPR++E L+ + VKQ++ACGFHTAALT++G++FT+GEG F
Sbjct:    2 SWGRGEDGQLGLGDTSDQHRPVLIDALHERRVVQIACGSGHTVVLTDDGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKKIRQVTCGSYHTAAVTVSGELFTWGGGMYGKLGHGNETGHSTPCLVEALKAQPVR--QVACGSRHTVVLLENKDVYTWGDKEKGVSGHGDTDGHQYLPRVVEELRGQHVKQISACGFHTAALTESGEVFTFGEGKF 217
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.530e-111
Identity = 158/220 (71.82%), Postives = 186/220 (84.55%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            VYSWGRGEDGQLGLGDT+DQ +PVLVDAL+ + +VQ+ACGSGHTVVL+E+G V+TWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP  V+ L+  G +V Q+ACGSRHTVVL +   VYTWGDKENGV GH   +G QYLP  LE L+ K VKQ++ACGFHTAALTDAG+++T+G+G F
Sbjct:   22 VYSWGRGEDGQLGLGDTSDQHRPVLVDALQERRIVQIACGSGHTVVLTEEGEVFTWGRGDDGRLGHGDNGWKFVPRLVEELRGRNIRQVTCGSYHTAAVTVAGDLYTWGGGMYGKLGHGNETGHSTPFLVESLK--GLQVRQVACGSRHTVVLLENRDVYTWGDKENGVSGHGETEGQQYLPSSLEELRGKSVKQISACGFHTAALTDAGEVYTFGDGKF 239
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A6V2KK16_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2KK16_9STRA)

HSP 1 Score: 343 bits (881), Expect = 2.180e-111
Identity = 157/220 (71.36%), Postives = 180/220 (81.82%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            V+SWGRGEDGQLG+GDT+DQD+P  VDAL+  GV Q+ACGSGHTVVL+ DG VYTWGRGDDGRLGHGDNGWKYVPR+ ++L GQ IVQ TCGSYHTAAV   G+LYTWGGGMYGKLGHGNESGH TP  V+ L   G  V+QIACGSRHT V+T  G +YTWGDKENGV GH + +GHQY P++LE L  K V Q++ACGFHT  LTDA ++FTWGEG F
Sbjct:   87 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGVRQIACGSGHTVVLTTDGEVYTWGRGDDGRLGHGDNGWKYVPRIAQSLAGQVIVQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEGL--VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRVVQLSACGFHTGCLTDAAEVFTWGEGKF 304
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A7S2U8G3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8G3_9STRA)

HSP 1 Score: 336 bits (862), Expect = 2.500e-111
Identity = 153/220 (69.55%), Postives = 179/220 (81.36%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            V+ WGRGEDGQLGLGDT+DQD+P  VDAL+  GV Q+ACGSGHTVVL+ DG V+TWGRGDDGRLGHGDNGWKYVPR+ ++L GQ +VQ TCGSYHTAAV   G+L+TWGGGMYGKLGHGNESGH TP  V+ L   G  V++IACGSRHT V+T  G +Y WGDKENGV GH + +GHQY P++LE L  K V Q++ACGFHT  LTDAG+I+TWGEG F
Sbjct:   59 VFMWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVRQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRIAQSLAGQVVVQVTCGSYHTAAVAGNGDLFTWGGGMYGKLGHGNESGHSTPRRVEGL--VGLAVSEIACGSRHTAVITSTGALYVWGDKENGVCGHGDTEGHQYTPKLLERLAGKRVIQLSACGFHTGCLTDAGEIYTWGEGKF 276
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: A0A6A5A679_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A679_9STRA)

HSP 1 Score: 330 bits (845), Expect = 3.930e-111
Identity = 154/220 (70.00%), Postives = 182/220 (82.73%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            VYSWGRGEDGQLGLGDT+DQ +PV+V+AL+ + VVQ+ACGSGHTVVL + G VYTWGRGDDGRLGHGDNGWK+VPR+VE+L+ ++I Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE GH  P  V+ L +   +V Q+ACGSRHTVVL     VYTWGDKENGV G  + DGHQYLP  +E L+ K +KQ+AACGFHTAAL+D G+++T+GEG F
Sbjct:    3 VYSWGRGEDGQLGLGDTSDQYRPVVVEALRERIVVQIACGSGHTVVLDDKGDVYTWGRGDDGRLGHGDNGWKFVPRLVESLQTKQIKQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEVGHSVPYLVETLSN--LKVDQVACGSRHTVVLLQNSDVYTWGDKENGVSGQGDTDGHQYLPCAVEELKNKGIKQIAACGFHTAALSDKGELYTFGEGKF 220
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV)

HSP 1 Score: 340 bits (871), Expect = 6.150e-111
Identity = 159/220 (72.27%), Postives = 184/220 (83.64%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            VYSWGRGEDGQLGLGDT+DQ +PVLV+AL+ K VVQ+ACGSGHTVVL E+G VYTWGRGDDGRLGHGDNGWK+VPR+VEAL G+RI Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNESGH  P  V  L +   +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + DGHQYLP  ++ L+ K + Q+AACGFHTAAL++ G+++T+GEG F
Sbjct:    9 VYSWGRGEDGQLGLGDTSDQYRPVLVEALRDKCVVQIACGSGHTVVLDENGDVYTWGRGDDGRLGHGDNGWKFVPRLVEALHGKRIKQVTCGSYHTAAVTVTGELYTWGGGMYGKLGHGNESGHSVPYLVDTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSEEGELYTFGEGKF 226
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BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Match: K3WAD0_GLOUD (BTB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAD0_GLOUD)

HSP 1 Score: 337 bits (863), Expect = 8.520e-110
Identity = 157/220 (71.36%), Postives = 185/220 (84.09%), Query Frame = 1 
Query:    1 VYSWGRGEDGQLGLGDTNDQDKPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGFHTAALTDAGDIFTWGEGGF 660
            VYSWGRGEDGQLGLGDT DQ +PVLVDAL+ + +VQ+ACGSGHTVVL+E+G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE+GH TP  V+ L+  G  V Q+ACGSRHTVVL +   VYTWGDKENGV GH + +G QYLP  +E L+ K +KQ++ACGFHTAAL+++GD++T+GEG F
Sbjct:    3 VYSWGRGEDGQLGLGDTIDQYRPVLVDALQERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGRAIRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNETGHSTPYLVESLK--GLPVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGQQYLPCNVEELRGKSIKQISACGFHTAALSESGDVYTFGEGKF 220
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6773.17792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK6_ECTSI4.230e-15490.21BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1GDB4_9STRA2.340e-11971.69Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B7G795_PHATC4.510e-11670.91Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A2D4CB68_PYTIN5.740e-11272.02BTB domain-containing protein (Fragment) n=2 Tax=P... [more]
A0A5D6YMT2_9STRA1.530e-11171.82BTB domain-containing protein n=1 Tax=Pythium bras... [more]
A0A6V2KK16_9STRA2.180e-11171.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2U8G3_9STRA2.500e-11169.55Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6A5A679_9STRA3.930e-11170.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
T0QPW3_SAPDV6.150e-11172.27BTB domain-containing protein n=4 Tax=Saprolegniac... [more]
K3WAD0_GLOUD8.520e-11071.36BTB domain-containing protein n=1 Tax=Globisporang... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6773contigF-serratus_M_contig6773:20139..27134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.0
Seed ortholog evalue8.8e-62
Seed eggNOG ortholog2880.D8LGK6
KEGG koko:K11494
Hectar predicted targeting categoryother localisation
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons5
Model size823
Cds size459
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932067.609669-UTR-F-serratus_M_contig6773:20138..202831622932067.609669-UTR-F-serratus_M_contig6773:20138..20283Fucus serratus maleUTRF-serratus_M_contig6773 20139..20283 +
1690964129.8790078-UTR-F-serratus_M_contig6773:20138..202831690964129.8790078-UTR-F-serratus_M_contig6773:20138..20283Fucus serratus maleUTRF-serratus_M_contig6773 20139..20283 +
1622932067.6295447-UTR-F-serratus_M_contig6773:25179..252981622932067.6295447-UTR-F-serratus_M_contig6773:25179..25298Fucus serratus maleUTRF-serratus_M_contig6773 25180..25298 +
1690964129.8903859-UTR-F-serratus_M_contig6773:25179..252981690964129.8903859-UTR-F-serratus_M_contig6773:25179..25298Fucus serratus maleUTRF-serratus_M_contig6773 25180..25298 +
1622932067.6461575-UTR-F-serratus_M_contig6773:25512..255511622932067.6461575-UTR-F-serratus_M_contig6773:25512..25551Fucus serratus maleUTRF-serratus_M_contig6773 25513..25551 +
1690964129.8998413-UTR-F-serratus_M_contig6773:25512..255511690964129.8998413-UTR-F-serratus_M_contig6773:25512..25551Fucus serratus maleUTRF-serratus_M_contig6773 25513..25551 +
1622932067.7297099-UTR-F-serratus_M_contig6773:27073..271341622932067.7297099-UTR-F-serratus_M_contig6773:27073..27134Fucus serratus maleUTRF-serratus_M_contig6773 27074..27134 +
1690964129.9566867-UTR-F-serratus_M_contig6773:27073..271341690964129.9566867-UTR-F-serratus_M_contig6773:27073..27134Fucus serratus maleUTRF-serratus_M_contig6773 27074..27134 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932067.6697836-CDS-F-serratus_M_contig6773:25551..255931622932067.6697836-CDS-F-serratus_M_contig6773:25551..25593Fucus serratus maleCDSF-serratus_M_contig6773 25552..25593 +
1690964129.9096944-CDS-F-serratus_M_contig6773:25551..255931690964129.9096944-CDS-F-serratus_M_contig6773:25551..25593Fucus serratus maleCDSF-serratus_M_contig6773 25552..25593 +
1622932067.6884193-CDS-F-serratus_M_contig6773:26139..262681622932067.6884193-CDS-F-serratus_M_contig6773:26139..26268Fucus serratus maleCDSF-serratus_M_contig6773 26140..26268 +
1690964129.922903-CDS-F-serratus_M_contig6773:26139..262681690964129.922903-CDS-F-serratus_M_contig6773:26139..26268Fucus serratus maleCDSF-serratus_M_contig6773 26140..26268 +
1622932067.7119722-CDS-F-serratus_M_contig6773:26785..270731622932067.7119722-CDS-F-serratus_M_contig6773:26785..27073Fucus serratus maleCDSF-serratus_M_contig6773 26786..27073 +
1690964129.9426794-CDS-F-serratus_M_contig6773:26785..270731690964129.9426794-CDS-F-serratus_M_contig6773:26785..27073Fucus serratus maleCDSF-serratus_M_contig6773 26786..27073 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6773.17792.1prot_F-serratus_M_contig6773.17792.1Fucus serratus malepolypeptideF-serratus_M_contig6773 25552..27073 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6773.17792.1

>prot_F-serratus_M_contig6773.17792.1 ID=prot_F-serratus_M_contig6773.17792.1|Name=mRNA_F-serratus_M_contig6773.17792.1|organism=Fucus serratus male|type=polypeptide|length=153bp
MGELYTWGGGMYGKLGHGNESGHPTPCNVKHLRDEGARVTQIACGSRHTV
VLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQTKVVKQVAACGF
HTAALTDAGDIFTWGEGGFPCFHLHVLQDNKNIPSSSLQVTAVFVFSNQH
HQ*
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mRNA from alignment at F-serratus_M_contig6773:20139..27134+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6773.17792.1 ID=mRNA_F-serratus_M_contig6773.17792.1|Name=mRNA_F-serratus_M_contig6773.17792.1|organism=Fucus serratus male|type=mRNA|length=6996bp|location=Sequence derived from alignment at F-serratus_M_contig6773:20139..27134+ (Fucus serratus male)
GTTTACTCGTGGGGTCGGGGGGAAGACGGACAGCTTGGGCTGGGAGACAC
GAACGATCAGGATAAACCGGTCTTGGTGGATGCGCTCAAGTGCAAGGGGG
TGGTGCAGGTGGCCTGCGGTAGCGGACACACCGTCGTCCTGAGCGGTAAG
TCGACCGCTGACAACTACTCAAGTATGTGTAGTTGACAGTTGACGCTTGA
TGGTAGGGAGAAGAAACATGCTGATCCCTACCGGGTCTGCTCCGTCTTTC
CGTGCTGTACGTTTTTGCTCTGGTCAAACTCGCCCCGAGATTTGCGGTTG
GAAGTGGAAAGCGGACTTTTTTTCCTCTGCCTGGTTGGCCTCGGGGTAAT
CGTTGCTCCGTAGTTTTGTACTTCAAGTGTTGTCTTACTTAACATCACCT
TCTGTATGTATGTAAGTACTTTCAGCAGGGCATATGGATCAAGGTGCGTT
CAGATTTTTCTTTAAACCAGGTACGATGGCTGACAATCTTCCTGCTCGTT
GTCAGCTAAACGAAGAAAAGTTAATTTTCCCTGTCCCCGTTCGCGCCTGA
GAAGGTGGTCTCGCGAGACGGATTCGGCCGACCCGTCCCGCGTGCCCTCT
ATGTTTGTGTTTGTTCGTGGGCGTATGAATGGATGGATGTATGGTCATCA
CATATAGCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCATG
GTCAGCTGAACAGGGAAAATGAATATTCCCCTGTCCCCGTGCGTGCCTGA
GAAATTGGCCTCTCGAGACGGGTTCAGCCGTCCCGTCCCGTCCCGCGTCA
GCCTGCTCATCTCCATACTCAGGCTGAATCTGGTCCTTACTTACGGGATT
CCTCCCGAGTTCCGCAGCGGCGTCCATTTATGAAACCGCCATACGCCATC
GGATCAGTCCCGAGTTTATCGGGTCACGCAAATGCGTACAGATGGCGTTC
ACTGCCGAGAGTTCGCCGGGGCCAGTAAACCTCAAGGTAGTTCCGAACGA
GTGCTGCCTTGGCAGGTCACCATGGACCAATTTATATACGCCTCTCTTTC
CCACCCCCACATTGTTATGAAGTGGGCATGTTGAAAGTACCGGCGGTACG
TACTTATGGATGTATGTATGGTCATCACATATAGCAGAGTATGGATCAAC
CGGGTAAGGTTGCCAATCCTGCTCGTAGACAGCTGAGCAGGGAAAATGGA
CATTCCCCTGTCCCCGTACGCACCTGGAAAATTGGTCTCGCGATACGGGT
TCAGCCGTCCCATCCCGCATCAGCCTGTTCATTCTCCATACTCAGGCTGA
ATCTGGTGTCTAACCCATCTGATCGTTCCAATATCTATGAATCTATTAAC
GGTTTGTGCTTTTTTCTGTAGGTGTATCTCGTATTAATAGAAGAGTACGT
TCCAGTTCTGCATGCAATGAACCCCACGACCCATGACGCAACCGTTGAGG
TAAGCCGTACATGCCCAACAAACTGAAGGCATGCATGCTGCATGCCACAC
CTGTGGGAGTTGAACGAGGTTGTGGTGTTCGCGCCAGTGTCGGTTACATA
GTATATAGATATATAGATGAATCGATATTTAGTATAGATACGTCACACAA
ACCGGGCAGTGGCAGTGTCTCGCGCGATATTTTTATACTGATACAGTACT
GTACATGTCCGTTGGTTTGCTCGTTGGGATGACTAGAATGCAGTAGAGTA
AAATTAATAACAACAGATCCGGAGATGATACTCGTTGGGATGACTGGAAT
ACAATTGTAGGAGACTTGACCCTTTCAACTATTAATAGGCCGTATCTGAT
TCCGTGTGGTTCAGGCGTAACTCTGGATCGTGTTTTGATGACCGGTGTTT
TGATGACCTTTACTACCAAGAACCATCAAAATCCAAAAAGCGTCTAAAGG
CTTGCTTCGATTGTTTTTATTTATGGTTCAACCCTCCCGATAAGAGCATG
CGCTTTTAGTTTTGTAATTTTCTTCGCCTTTTTTGTTGTTTTGGGGTCGG
GGGTATTGGGATCTTCCCAAAGGGCCTATATCTTCTGCCAGATATCTCAA
AGAAGCAATTTGCCTTTGATTTATTTTTGTTGGGGACGCCGATCCCTCGA
GGCCGATCGTTATGGGAAAATGGCGCAAAAAAAAAAGGTACAGGAATGTG
TTATTTCTGTGCTCGAAAAGACTAAAAAAAACGGGGCTTGCAGAGCTTTG
GCCCTCTGTCTTCATCGGCCCTTCATGTCTCATTGATCTCGATTTTTGAA
TTGAAATCTATTTGCACATTTCGCCCGACTATGTAATCATTCTATGCATT
CACAGCTTTTAAGTAAATCTAACTGGTATCTATGAATATCAATACCGAAG
AGGGGTTGGGTTTCTTGTATGATCTCTCTCCAATGTGTAGACAAAAAAAA
ATGTCGACGGAAACAGTCACCTCGCCACTTTATCGCATACGCCTCGCACT
TGTGCATCAAACCCTATTACTAGTACTATTAATAGTATTAACAAACTTGG
ACGAGAAAGGGAAATGGGGGAATAAAAAACGGCACAACCATACGGACAGC
GAAGAGCGTATTTTTACGTACGTACAATCTGGTCTGGCGATAGACAATAC
GCAGGCGACGCGGCGACGCAGCTATGTTGTTTAAAGAAAATCAGAACGCG
CCTATACCTTCTGCTGTCATAGCATCCTCCAGTCAGAAGAAAAATGTCAA
AACGTTTAGGTGGGATCAAAGGCTGCAAATACAAAACCTCTTCATGGCAA
TTAAACGGGTTCCCCTATGTTGTTGTTGTTGTTTTCTTCACATTAATCGA
TCGGGCCTCAACCATAGCCAGTAATATACGTGGTTGCCGATCCGGTACGT
GGTCACAAAGAGGTACAAAGGTCAACGAGCCACATCATGGTGACAACCCG
CTACTCAGACCAACAGGGATCCAAATCGCGACAAAAAGTTATGCGACTCT
ACAATCAATGGCACCGACCAATATCAAAACAGTTCATCAAACATCCTTAT
TTCATATCGAGAGCAACCTCGATCGACTCGGATTGTTATCCCCTACCCAC
GACCAGCGTTCTAAGCAAAAATACGGAAGAATTACGCTCCAACCAGTTTT
GATCAGCAAGAAGTCCAAGTTTCTCAAGGCCACACAATCGTACAGAAATA
AGGAAAATTGAAATACCGAGGTCCATGGTGGTGGAGGCCTTGAGCTGGTG
AAGCCGCCGCGCGAGCCAGTATCCAGCCGTCCAAAGCCCTGTGCATCCCT
GGAAAAGCCCCATGAATCTTGCCCGTTCGCCGCTCCTTGTGGCCCTCGTA
GGAAGAAATAAGACCGTGGTCAGATGTCAGCTTTTCCTCAGAAACCTCCC
GGTCCAAACCTGTGATTCTCGCGCACAGAGGTTCGGCCCTCCCCTGGCTC
GTCGACGATCGAGCTGCCCTCCGCCTTCGCCGAATCTGGTGCGTACCCAC
CCGATAGAGCACTACCAGGCTCTCCGCGGCAGTGCTCCCTGCCTCTCGCG
TGCCGCCACCCTCTCGAAGGCCACCAAATTGGGGCTCGGAAGAGGCGCGC
ACCTGGGAGCACCATCATCTTCAGCCAACCATACCGCCGCCGCGTCTCAA
CCTACAGGCTGAATCGCGAAGGCAGCCAGTTGGCTGCACCTCTTGAGGAT
GAGTCCGGCCCTACACCCGCCGGAAAGAGCCCCCCACACTCATACCCCGA
AACCAGGTTTCGGAGGGAGAGGGCACGAGTTAATGTGTTACGCCTTTATG
CACTTATCAATTGATGACGTATGATACGTACAAACCTGTGGTGGGGGCGA
ACGAAACAACATAGCTTGCGTGATTGGGTTTCGACAGTTACTGCTGCGGT
CAGACAACAGGCCGACTACCGCCAGATCAGCCATCTGTCAGGTGATTGAT
TTATGATACCTGGGAGTTGCACACACAAAGAGCGAGATGTATACTATTAA
TATATGTTTTACAGCACTAGGGGTGACTGTCTGGCTGTGTGGTGTCTCCT
TTGGGAGGCGTTATGAATTCCTGAGGTGGGTCAAAGACCCTCAAAGATCG
GGAAAAATTATGGTCGGGGCAATTTTGTCACGGACTCAGAAATAAGGCTT
TGTGGGCCATAATAGGCGAAACGCAAAAAAGGCCAGCAAGCACAGAAATC
AGATAATTTTTTTGCGCGGACCGATTTTTGTGTTCCCATAACGATCGACC
TAGATTCACCGTCTACAAGTGTGTATTTAAAAGTACATGCAAATAGATAT
CTCGGGCTAAACCTCATATTTTGTAGGTACTCCGTTGAAAGCATCACCTA
CAGCAGTACTGATCTAATATTAACAGTTCAGTTTCGTACCATTCGCTTGC
CACGTCTTAGCAATGCTTGGAGCGTCTTTGGGTGCAGGGCCCTACTGCCG
GTTGTACGGATTGTTTTCTTGTTTGAGTTACACGAGAGTATTGATTGGGC
CGTCGCAGATTTGGACCATCTCCCCTCTACCGAATACAACAAACACAGAC
ACAGACACACAGACAAAGGTATAATAGTCACATCATCGCTACGCACCGAA
GAACTCCGCAATTCATTCCTATACATACATACATACATATACATACATAC
ATACATACATACATACATACATACATACTAATAAGTTTCATTGATCCCCC
CTTGGGAGGATCAATACGAGTGGCATAGAATGACTAGGATGACAGGGCCG
GATTGCGCGGTTATGTGCAATTTAATAAATATACATACATACATACATAC
ATATACATACATATACATACATACATACATACATACATACATACATACAT
ACATACATACATACATACATACATACATACATACATACATACATACATAC
ATACATACATATGTATGTATACATATACATACATACATACATACATACAC
ACGGAGGCGAGGCACACAGCGGGATCAGTACGAGCACCAAAGCTTTTTTT
TAGCACGGCAAGGCCGGATTTGCGCGTGATGTACACTTAAATAAGTACAA
AAACACGAACGCACACGCACGTGAAATCTTGTGCATTGCAGAGGACGGTG
CGGTATACACGTGGGGGCGTGGGGACGACGGAAGACTCGGCCACGGGGAT
AATGGTTGGAAGTATGTGCCGCGTGTGGTGGAGGCGCTCGAGGGGCAACG
CATCGTCCAGGTCAGAATATGAAACAAATTAAAGGGGGGAAGGGTTGTAA
GCACCAGCGTCTCAACAGGTGTTTGTCGTTGAAGCATGTTAGAGCTCTCG
AGCGACGCACTACTCACGCGATCGAGGCGTTAGCGCCGTTTCTCGTCCGG
GTGATGGTGAAACTCTTGTCCGGCACCGTATCGCGTCGGATCGTGCCATG
TATTTTATCTCTCCCTCCCCAAAGGCAACGTGCGGGAGCTACCACACTGC
TGCCGTGACCGACATGGGGGAGCTCTACACGTGGGGAGGAGGCATGTACG
GTAAGGTGAGGCCTACGCTTTTTACCTCCGTGGGGGTAAATAATAAGGAA
GAGGAGGGAAGGGGCTCGGGGGTCAGGTGCCTGCTGCTGTGAGCTGTTGA
AAGAGTGTTGGTCATGGAGACAAACTGCACTGAACGCCCCCATCAAAGCG
AACTCTTTGGTCTATACCGGTATGGCTTCACCCGTAGGGACAGACAGACG
CACGAGACTGGGGAGGAAAGGGAGGAACGATTCACGAAAATATACGAGTA
CGCAGATAAATCCCGTTTTTCTTACTTTGGTATCATAGCTCTAGGCCTAC
AGCTATCGCACTAATACTATTAATAGTACTGTAGTAGTAATTGTGTAACG
CCTGTACTTATTACTAGTCACCAGTCAAAAGCACTACAGTTGATACTCCA
CGACCGTTGAACGCTATACAGTAAATAGACAATTATTGGCTCGAATTATC
CCGTTTTCCGTTGTCTCATGACGCGCCCCGCCGTTCCATCGCATGTTTGT
CTTGATATTTGTATGCAATACCGAACCGGCGTGTACCGAATATGACTCCA
GCTCGGCCACGGAAACGAGAGCGGGCACCCAACGCCATGCAACGTAAAGC
ACCTTCGAGACGAGGGGGCAAGGGTCACGCAGATCGCGTGTGGCAGCCGT
CACACCGTCGTGCTCACCGACCTCGGGAAGGTGGGTTCTCGGGCGAGGGG
AGGGGAGGGGAGGGGCTGGAGCGATTTGTGTGTGGCGAATCGGTTGGTGT
TGTATTGGTCTCTAGTAATACTTCGCAATAGAGCGCTTAATACAATAGAA
TAGTGTAGAAGACGGAATTGCCCCAAGAGCCACGAACTGCGGTCTAGTGG
CTTGTGTGAGAAGGAAAGAGTTCAACGCGTCGGACCTTTCAATTCGATAC
TACTCTACCTGCTTTTAGTTCGTTGGGCCTTCTTCAATGCTACCGGTGCA
CGGTAACTCGGGAGCCCAATATTCTTGTAGCCGTCCAGCGCTACCAGCGC
CGTAGTAGGTGACTTGACAGGGTTTTTACTGTAAATAGTACACAGAATGT
GCGTACTTGTAGCTCTTTTTTATAAGAATCCAGGGGGACAAATATTTCTC
GTACCCGCGTACCCGTAGCATTAAATTGAGCCGGGCATGGAGGGACTCGG
TCGGTCTCCCGGTTCTAATCTCGGTCTCTCGGTGGCACGGTGGCCAGGTG
TACACGTGGGGGGACAAGGAGAACGGGGTCGTGGGGCACACCAACGCCGA
CGGCCACCAGTACTTGCCCCGCATGCTGGAGTCGCTGCAGACCAAGGTGG
TCAAGCAGGTGGCGGCGTGCGGCTTTCACACGGCGGCGCTCACGGACGCG
GGAGATATTTTCACCTGGGGCGAAGGCGGGTTTCCATGTTTTCACTTGCA
TGTTTTGCAAGACAACAAAAACATACCAAGTAGCTCTCTTCAAGTAACTG
CCGTGTTTGTATTTTCCAACCAACACCATCAGTAGGTTGTTTTTCGTACA
GTATTCAGAGCATGCCATGCTGCTATTATACGTATTCTAGACTAGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig6773:20139..27134+

>mRNA_F-serratus_M_contig6773.17792.1 ID=mRNA_F-serratus_M_contig6773.17792.1|Name=mRNA_F-serratus_M_contig6773.17792.1|organism=Fucus serratus male|type=CDS|length=918bp|location=Sequence derived from alignment at F-serratus_M_contig6773:20139..27134+ (Fucus serratus male)
ATGGGGGAGCTCTACACGTGGGGAGGAGGCATGTACGGTAAGATGGGGGA
GCTCTACACGTGGGGAGGAGGCATGTACGGTAAGCTCGGCCACGGAAACG
AGAGCGGGCACCCAACGCCATGCAACGTAAAGCACCTTCGAGACGAGGGG
GCAAGGGTCACGCAGATCGCGTGTGGCAGCCGTCACACCGTCGTGCTCAC
CGACCTCGGGAAGCTCGGCCACGGAAACGAGAGCGGGCACCCAACGCCAT
GCAACGTAAAGCACCTTCGAGACGAGGGGGCAAGGGTCACGCAGATCGCG
TGTGGCAGCCGTCACACCGTCGTGCTCACCGACCTCGGGAAGGTGTACAC
GTGGGGGGACAAGGAGAACGGGGTCGTGGGGCACACCAACGCCGACGGCC
ACCAGTACTTGCCCCGCATGCTGGAGTCGCTGCAGACCAAGGTGGTCAAG
CAGGTGGCGGCGTGCGGCTTTCACACGGCGGCGCTCACGGACGCGGGAGA
TATTTTCACCTGGGGCGAAGGCGGGTTTCCATGTTTTCACTTGCATGTTT
TGCAAGACAACAAAAACATACCAAGTAGCTCTCTTCAAGTAACTGCCGTG
TTTGTATTTTCCAACCAACACCATCAGTAGGTGTACACGTGGGGGGACAA
GGAGAACGGGGTCGTGGGGCACACCAACGCCGACGGCCACCAGTACTTGC
CCCGCATGCTGGAGTCGCTGCAGACCAAGGTGGTCAAGCAGGTGGCGGCG
TGCGGCTTTCACACGGCGGCGCTCACGGACGCGGGAGATATTTTCACCTG
GGGCGAAGGCGGGTTTCCATGTTTTCACTTGCATGTTTTGCAAGACAACA
AAAACATACCAAGTAGCTCTCTTCAAGTAACTGCCGTGTTTGTATTTTCC
AACCAACACCATCAGTAG
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