mRNA_F-serratus_M_contig671.17742.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig671.17742.1
Unique NamemRNA_F-serratus_M_contig671.17742.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 3.870e-82
Identity = 127/235 (54.04%), Postives = 171/235 (72.77%), Query Frame = 3
Query:  375 RGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
            R +       RELEAM RL+SPH V VYGAVTC  D L++VMELL+GGDLR  L +  +P  E ++R+++GDVC+GMAFLHSK+T+HGDLKS+NVLLDGAGRAKI DFG +RW Q + +TGLATY +   ++  MS+ W+APEVL+  GS++ SDVYSFGIV WEV+++++PWA   R  ++    V+ G RPVIP  A  D+A+  K+CWA  P  RP F  ++ G++ NGW++
Sbjct:  155 REQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNSTGLATYTTRSSRSTPMSLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDVIC-AVLKGLRPVIPAGATVDIADVMKACWAEEPEARPKFGAIMEGLKLNGWKE 388          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.630e-77
Identity = 136/235 (57.87%), Postives = 169/235 (71.91%), Query Frame = 3
Query:  375 RGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
            R +       RELEAM RLRSPH V VYGA+T R D LV+VMELLAGGDLR  L  + +PL E + R+++GD+CAGM FLHSKET+HGDLKS+NVLLDGAGRAKI DFG +RW+  + +TGLATY  + G+   MS+ W+APEVL   GS++ASDVYSFGIV WEVL+RE+PWA V    E+Y RVV+   RP IP  AP D+A   ++CWA  P  RPT   ++  + +NGW D
Sbjct:  977 REKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATYTKA-GQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIESNGWSD 1210          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.200e-75
Identity = 129/238 (54.20%), Postives = 168/238 (70.59%), Query Frame = 3
Query:  366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
            ++ R      G  RELEAM RLRSP+ V VYGAVT   D +V+VMELL  GDL   L  +  PL E ++RQ++GD+CAGMAFLH K T+HGDLKS+NVLLDG GRAKI DFG +RW+Q + +TGLATY +   ++  MS+ W+APEVL++GGS++ SDVYSFGIVVWEVL+RE+PWA  +R  ++    V++G RP     AP D+ + AK+CW   P  R TF  +L GM A GW++
Sbjct:  840 QKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDILS-AVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGWRE 1076          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 3.900e-75
Identity = 137/233 (58.80%), Postives = 173/233 (74.25%), Query Frame = 3
Query:  381 EESTPGVF-RELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYD--SSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANG 1070
            E+S    F REL+AM RLRSPH V VYGAVT   D +V+VMELL+GGDLR  L   ++PL E ++R+++GD+CAGMAFLHSK+T+HGDLKS+NVLLDG+GRAKI DFG +RW+Q + +TGLATY   SSPG    MS+ W+APEVL++GGS+ ASDVYSFGIVVWEV++ E+PWA  SR  E+    V++G RP   D AP D+ E AK+CW   P  R TF  V+ GM + G
Sbjct:  719 EDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPGTQ--MSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILS-AVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMSKG 948          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 4.450e-75
Identity = 128/238 (53.78%), Postives = 168/238 (70.59%), Query Frame = 3
Query:  366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
            ++ R      G  RELEAM RLRSP+ V VYGAVT   D +V+VMELL  GDL   L  + +PL E ++RQ++GD+CAGMAFLH K T+HGDLKS+NVLLDG GRAKI DFG +RW+Q + +TGLATY +   ++  MS+ W+APEVL++GGS++ SDVYSFGIVVWEV +RE+PWA  +R  ++    V++G RP     AP D+ + AK+CW   P  R TF  +L GM A GW++
Sbjct:  865 QKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDILS-AVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGWRE 1101          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 6.630e-75
Identity = 128/213 (60.09%), Postives = 164/213 (77.00%), Query Frame = 3
Query:  402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTF 1037
             RELEAM RLR+PH V VYGA+T + + LV+VMELLAGGDLR  L  +++PL E++ RQ++ DVCAGMAFLHSK T+HGDLKS+NVLLDG GRAKI DFG +RW Q +  +TGLATY ++PG +  +S+ W APEVL+   +S ASDVYSFG+V WEVLTR+ PWA  +R  +++ RVV+  +RP IP  AP D+AE  +SCWA+ P +RPTF
Sbjct:  712 LRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFLRVVMREERPAIPADAPVDIAEMVRSCWAQEPLDRPTF 924          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.880e-74
Identity = 129/213 (60.56%), Postives = 163/213 (76.53%), Query Frame = 3
Query:  402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTF 1037
             REL+AM RLR+PH V VYGA+T   D LV+VMELLAGGDLR  L  +++PL E++ RQ++ DVCAGMAFLHSK T+HGDLKS+NVLLDG GRAKI DFG +RW Q +  +TGLATY ++PG +  +S  W APEVL++  +S ASDVYSFG+V WEVLTR+ PWA  +R  ++Y RVV+  +RP IP  AP D+AE  +SCWA+ P +RPTF
Sbjct:  874 LRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSAHISFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYLRVVMREERPAIPADAPVDIAEMVRSCWAQEPEDRPTF 1086          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 3.090e-74
Identity = 126/223 (56.50%), Postives = 165/223 (73.99%), Query Frame = 3
Query:  402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRAN 1067
             REL+AM RLR PH V VYGA+T   D L++V+ELL GGDLR  L  +++PL E ++RQ++ D+CAGMAFLHSK T+HGDLKS+N+LLD  GRAKI DFG +RWTQ +  +TGLATY ++PG +  +S  W APEVL+   +S ASDVYSFGIVVWEVL+R++PWA  ++  ++Y RVVI GDRP +P  AP D+A+    CWA+ P  RPTF+ + GG +  
Sbjct:  936 LRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQALSGGEKVK 1158          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.590e-73
Identity = 129/239 (53.97%), Postives = 173/239 (72.38%), Query Frame = 3
Query:  363 AERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
            A+  + +       REL+AM RLRSPH V VYGAVT + D +V+VMELL+GGDLR  L  +++PL + ++R+++GD+CAGMAFLH K+T+HGDLKS+NVLLDG+GRAKI DFG +RW+Q + +TGLATY ++   T  MS+ W+APEVL++GGS++ASDVYSFGIVVWEV++ E+PWA  +R  E+    V++G RP     AP D+ E AK+CW   P  R TF  VL GM +    D
Sbjct:  853 AKHHQNDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTTTKPSTQ-MSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILS-AVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDSKEPHD 1089          
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 2.520e-73
Identity = 131/239 (54.81%), Postives = 165/239 (69.04%), Query Frame = 3
Query:  366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQDD 1082
            ++ R         RELEAM RLRS + V V+GAVT   D +V+VMELLAGGDL   L  +K+ L E ++R ++ D+C GMAFLHSK T+HGDLKS+NVLLD  GRAKIADFG +RWTQ   +TGL TY +   +T  MS+ W+APEVL +  SS+ SDVYSFGIVVWEVL+RE+PWA  +R SE+    V+ G RP     AP D+ + AK+CW   P  R TFR +L GM+ANGW D+
Sbjct:  662 QKQRETRERRAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLT-AVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKANGWGDE 899          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAU2_ECTSI3.870e-8254.04Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KY76_9PHAE1.630e-7757.87Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7X7_ECTSI1.200e-7554.20ATP binding / amino acid binding / protein kinase/... [more]
D8LRE9_ECTSI3.900e-7558.80Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
A0A6H5KF25_9PHAE4.450e-7553.78Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FRQ5_ECTSI6.630e-7560.09Similar to CG1848-PA, isoform A/ leucine rich repe... [more]
D8LH32_ECTSI1.880e-7460.56Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca... [more]
D7FN19_ECTSI3.090e-7456.50Putative CTR1-like protein kinase/ leucine rich re... [more]
D8LHV1_ECTSI1.590e-7353.97Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JSI8_9PHAE2.520e-7354.81Protein kinase domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig671contigF-serratus_M_contig671:153090..155601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.0
Seed ortholog evalue3.1e-68
Seed eggNOG ortholog2880.D8LRF5
Preferred nameRIPK4
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons4
Model size1839
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig671.17742.1prot_F-serratus_M_contig671.17742.1Fucus serratus malepolypeptideF-serratus_M_contig671 153712..154847 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932060.0367403-UTR-F-serratus_M_contig671:153089..1531911622932060.0367403-UTR-F-serratus_M_contig671:153089..153191Fucus serratus maleUTRF-serratus_M_contig671 153090..153191 +
1690964126.0806875-UTR-F-serratus_M_contig671:153089..1531911690964126.0806875-UTR-F-serratus_M_contig671:153089..153191Fucus serratus maleUTRF-serratus_M_contig671 153090..153191 +
1622932060.0506663-UTR-F-serratus_M_contig671:153394..1537111622932060.0506663-UTR-F-serratus_M_contig671:153394..153711Fucus serratus maleUTRF-serratus_M_contig671 153395..153711 +
1690964126.0952144-UTR-F-serratus_M_contig671:153394..1537111690964126.0952144-UTR-F-serratus_M_contig671:153394..153711Fucus serratus maleUTRF-serratus_M_contig671 153395..153711 +
1622932060.1266026-UTR-F-serratus_M_contig671:154847..1556011622932060.1266026-UTR-F-serratus_M_contig671:154847..155601Fucus serratus maleUTRF-serratus_M_contig671 154848..155601 +
1690964126.151852-UTR-F-serratus_M_contig671:154847..1556011690964126.151852-UTR-F-serratus_M_contig671:154847..155601Fucus serratus maleUTRF-serratus_M_contig671 154848..155601 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932060.0700748-CDS-F-serratus_M_contig671:153711..1539781622932060.0700748-CDS-F-serratus_M_contig671:153711..153978Fucus serratus maleCDSF-serratus_M_contig671 153712..153978 +
1690964126.1074884-CDS-F-serratus_M_contig671:153711..1539781690964126.1074884-CDS-F-serratus_M_contig671:153711..153978Fucus serratus maleCDSF-serratus_M_contig671 153712..153978 +
1622932060.0875487-CDS-F-serratus_M_contig671:154168..1542851622932060.0875487-CDS-F-serratus_M_contig671:154168..154285Fucus serratus maleCDSF-serratus_M_contig671 154169..154285 +
1690964126.1208525-CDS-F-serratus_M_contig671:154168..1542851690964126.1208525-CDS-F-serratus_M_contig671:154168..154285Fucus serratus maleCDSF-serratus_M_contig671 154169..154285 +
1622932060.1019435-CDS-F-serratus_M_contig671:154565..1548471622932060.1019435-CDS-F-serratus_M_contig671:154565..154847Fucus serratus maleCDSF-serratus_M_contig671 154566..154847 +
1690964126.1380215-CDS-F-serratus_M_contig671:154565..1548471690964126.1380215-CDS-F-serratus_M_contig671:154565..154847Fucus serratus maleCDSF-serratus_M_contig671 154566..154847 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig671.17742.1

>prot_F-serratus_M_contig671.17742.1 ID=prot_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=polypeptide|length=222bp
MFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENR
ARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQ
RSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWE
VLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIP
ANRPTFRHVLGGMRANGWQDD*
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mRNA from alignment at F-serratus_M_contig671:153090..155601+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig671.17742.1 ID=mRNA_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=mRNA|length=2512bp|location=Sequence derived from alignment at F-serratus_M_contig671:153090..155601+ (Fucus serratus male)
CTCACCTCTCACATCCCATCTTGCCTAAATGACCCGCAGGTCGTTCTGCA CGTTGGAAAGGAAATAAAAGACGTCGTGAAACACAGTTCAAGTGCCGCCA AGGCAAGTGGTTGGTGTCGCAGTAAGTGCCGGCCGGGACGTATCTGTGAT TTTGGCGTGGCTTCGCTGAAAATTTATGCGCTGACTGCAGGTATGAAACT CGCCTCTCCAAGTAGTTAGTATCACTAGTGCATAAAAGATCAGATTCTAG GGCAATCGCTTTTATTTCTCACTTGGTCGGTCTTTTGCCACCGCTGCCTC TTCAGGTGACTCCCAAAAGCCCGCTTCTTACACCCGAGGCTGATCCGATG CAGTCACGACGCTTACGAAGGCAGCGACGTCTCGACGAGATCGAGATTCC GGAAGACAAGCTGATTCTTACAGACGAGGTATTGGGCATGGGCGCATTCG GCAAAGTCGTCATTTGTGACTTCTACGGCAGAAATGCGGCGGCCAAGGTC CTGCCGATATCCCGCAATGATTACGATGCCAACGGAGGGGACAACGATGA CGAAGAGGAGGCTAGGCAGAAAGAGCGCGCGGAGAAGAGTCAACGCCGGG AGTTTTCCGCGAACTCGAAGCTATGTTTCGTCTTCGAAGCCCTCACATAG TCCAGGTCTACGGGGCAGTAACCTGCCGTAAGGACGAATTGGTCATCGTC ATGGAGCTCCTCGCCGGAGGTGATCTGCGCGTGTTCTTGGACGCAGCAAA GGAGCCTCTATCGGAAAACCGCGCACGGCAGCTAGTCGGCGACGTGTGCG CAGGCATGGCATTTTTGCACAGCAAGGAAACCATCCATGGCGACCTCAAG TCGTCGAACGTCCTGCTGGACGGGGCGGGCAGAGCGAAGGTACGCACACG AGAGAAACCATGTATGGGATAAATGATCGGTCAAAATCGAAATTGACGCC TTCCTTATATCGAACAAGAGCCATGTGGGTGTTATTGAAAGTGCGTCAGT TTCGTAGAGTGTAAAGATCGCTCGCAGGGTATGTGAATGCAACCGTTCGC AACGTGTGACTTTCCTCCGCGGGTTCCAGATCGCTGACTTCGGTGCCGCG CGGTGGACGCAACGGTCCACGGCTACCGGTCTCGCGACGTATGACTCCAG TCCAGGAAAGACAAACTTCATGAGCGTGCTGTGGGCTGCTCCAGAGGCAA GTGGTTCAAGATCTCAAGTCCTTTGCAATTTTGTGCTGAAATGTGTGTAC ACAAGAGATAGTTCTTGCGCAAACAATCAAACCAAGTGGTGCCGCCACTG TAGGGGGGGAGGGTTGTTAGTGGGACGTGTGGAGATTTCCCATAGCGGCA AGCATGAACCATTCATCGCATTTTAACACAGAAAAACTGAGCCCTTGCCG TCCAAAGATAATCAAAGCCGAGTGAAGCTCCAATCTGTAATGTATGCAAA TGCTCCCGGTCTGCCCAAAAGTACAGGTGCTCCAGAATGGTGGCTCTTCG TTCGCAAGCGACGTGTATAGCTTCGGGATCGTGGTGTGGGAAGTTCTTAC GAGAGAGGTTCCATGGGCGGGTGTCTCCCGCGATAGCGAGTTATACAGGC GTGTGGTAATCGTCGGGGACCGTCCTGTGATACCCGACACCGCTCCAGAT GATTTAGCAGAAACCGCGAAGTCGTGCTGGGCGAGAATACCGGCAAATCG ACCGACATTCCGACATGTCTTGGGAGGGATGAGAGCGAACGGCTGGCAGG ACGACTGAATCCCATCAATAGTTTAGATCAATTTGGTTCTCATTTGATTC TTAAACTCTGAGTTGACGACAATCTCATTTACGAGTGCTTGACAAGGCCG GCCGTGTGAATTAAGCGGCGGGTGTATGTATGGCCATACAGTCAGTATGT TTTCCGCGGGTCGTGTTTAAGGCGTATTTATAATAGATTAAGAAGGGGAT GAAGGGTCATTTTCCCTGTGTAGCCGACTGCGTTGAAGAGTTTGCTGTGC GCCTTTTAACAGTTGGTGACAAGACAGGAAGGGTGAGAAGCAAACCAACC CACTCCCTCCCCTCCCACGTCCCCGTCCCCCTCAGACGACTCTAAGCAAC AACAACAAAAATGCGAAAAAAAACTGCTCATGATGTGTCTAAAAACTAAA TCAAGTTGTAGTTCTACACGGCGAATAAAAATGCCCTGTCGAGTTTGGTG GATTTTTATTGTAATGTCAATCAATGTGCGGGTGCCGGGCGAAAAGAAGC AGAATAAACGTAGCAGACTGCCCATAATATGATTCTATATAAATGCCTAT TGCTACCGCTATGAAGTGTGGGCGATGTTACATAGTAAGCAGTATGCTGC GAAGGGGCGCACAGAGGTTGTGGAAACTATGGGCGGCGGTGATGTTGGAT GACGTGGCGGGGCTCGAGCCAGCACGGGAGGCGATGGGGTTAGTTTGTAC GAGTTGGAGGAGGGCACTACTTTATAAGGTGACATCCAAAGGAGGGTATA ACGTAATAAGCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig671:153090..155601+

>mRNA_F-serratus_M_contig671.17742.1 ID=mRNA_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=CDS|length=1332bp|location=Sequence derived from alignment at F-serratus_M_contig671:153090..155601+ (Fucus serratus male)
ATGTTTCGTCTTCGAAGCCCTCACATAGTCCAGGTCTACGGGGCAGTAAC
CTGCCGTAAGGACGAATTGGTCATCGTCATGGAGCTCCTCGCCGGAGGTG
ATCTGCGCGTGTTCTTGGACGCAGCAAAGGAGCCTCTATCGGAAAACCGC
GCACGGCAGCTAGTCGGCGACGTGTGCGCAGGCATGGCATTTTTGCACAG
CAAGGAAACCATCCATGGCGACCTCAAGTCGTCGAACGTCCTGCTGGACG
GGGCGGGCAGAGCGAAGATGTTTCGTCTTCGAAGCCCTCACATAGTCCAG
GTCTACGGGGCAGTAACCTGCCGTAAGGACGAATTGGTCATCGTCATGGA
GCTCCTCGCCGGAGGTGATCTGCGCGTGTTCTTGGACGCAGCAAAGGAGC
CTCTATCGGAAAACCGCGCACGGCAGCTAGTCGGCGACGTGTGCGCAGGC
ATGGCATTTTTGCACAGCAAGGAAACCATCCATGGCGACCTCAAGTCGTC
GAACGTCCTGCTGGACGGGGCGGGCAGAGCGAAGATCGCTGACTTCGGTG
CCGCGCGGTGGACGCAACGGTCCACGGCTACCGGTCTCGCGACGTATGAC
TCCAGTCCAGGAAAGACAAACTTCATGAGCGTGCTGTGGGCTGCTCCAGA
GATCGCTGACTTCGGTGCCGCGCGGTGGACGCAACGGTCCACGGCTACCG
GTCTCGCGACGTATGACTCCAGTCCAGGAAAGACAAACTTCATGAGCGTG
CTGTGGGCTGCTCCAGAGGTGCTCCAGAATGGTGGCTCTTCGTTCGCAAG
CGACGTGTATAGCTTCGGGATCGTGGTGTGGGAAGTTCTTACGAGAGAGG
TTCCATGGGCGGGTGTCTCCCGCGATAGCGAGTTATACAGGCGTGTGGTA
ATCGTCGGGGACCGTCCTGTGATACCCGACACCGCTCCAGATGATTTAGC
AGAAACCGCGAAGTCGTGCTGGGCGAGAATACCGGCAAATCGACCGACAT
TCCGACATGTCTTGGGAGGGATGAGAGCGAACGGCTGGCAGGACGACTGA
GTGCTCCAGAATGGTGGCTCTTCGTTCGCAAGCGACGTGTATAGCTTCGG
GATCGTGGTGTGGGAAGTTCTTACGAGAGAGGTTCCATGGGCGGGTGTCT
CCCGCGATAGCGAGTTATACAGGCGTGTGGTAATCGTCGGGGACCGTCCT
GTGATACCCGACACCGCTCCAGATGATTTAGCAGAAACCGCGAAGTCGTG
CTGGGCGAGAATACCGGCAAATCGACCGACATTCCGACATGTCTTGGGAG
GGATGAGAGCGAACGGCTGGCAGGACGACTGA
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