mRNA_F-serratus_M_contig6704.17738.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6704.17738.1
Unique NamemRNA_F-serratus_M_contig6704.17738.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 5.200e-63
Identity = 135/245 (55.10%), Postives = 172/245 (70.20%), Query Frame = 1
Query:   55 VASFSSGSIWDEENDDFGPSNITGCRFDGNRATDGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVD-----MDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGSTAGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            +A FSSGS+     +  GP N T C F+ N A DGGA Y+AAGYD+V + SF  NFA + GGALLHSGVLV + XXXXXXXXXXXXXXXXXXXX AE  + ++F  N+F+C  G+YG +      + +DTCR+ VVCS C    C+D   +D     +++  +P C  V  GVN++GN+G TL+TLDL SG++RTS++S  + +C+REEAC GGSTAG YCA GY G YCAAC+EGY SG QYSC
Sbjct:  210 MAFFSSGSL-----EGSGPVNTTACVFERNSADDGGAFYSAAGYDLVQDCSFQANFAALSGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYCAPGQYGSDAHFLDEEVADTCRLEVVCSRCVSSPCEDDDMLDNGISVLEDNVVPHCKAVAVGVNVSGNAGTTLQTLDLESGYYRTSAESDIILECHREEACVGGSTAGEYCATGYQGAYCAACEEGYASGLQYSC 449          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.380e-52
Identity = 102/235 (43.40%), Postives = 144/235 (61.28%), Query Frame = 1
Query:   76 SIWDEENDDFGPSNITGCRFDGNRATDGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTG--VDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGSTAGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            S++D+++   G  N T C F GN A DGGA+Y+AAGYD + +  F  N A   GGA LHSGVLV L                      A  I+  +F +N+++C SG+YG E +I   + S TCR  VVCS C    C+D+ G  V +++A +P+C+    GV+ +G+ G+TL  L+L+ G++RTS++S+ V KCY+EEAC GG+    YC +GY G YCA CDEGY SG+Q+SC
Sbjct:  439 SLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCA-ASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSC 672          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.040e-20
Identity = 96/261 (36.78%), Postives = 124/261 (47.51%), Query Frame = 1
Query:    4 SINNAVFTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNA-TIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGG--STAGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            + ++  F  N+   GG  + F SG+     +    P+    CRF  N AT  GGA+ +AAG D+V NS F  N AEV GGAL  +G     XXXXXXX                 T++  SF  N F C    + LE D      +D      VC  C    C    G   D    +P C  V D    TG   +TLETL +  G++R +S S+E+  CY  +AC GG   TAG YC + Y GPYC+ C +GY S   YSC
Sbjct:  785 TFSDVSFISNFAQVGGAASVFGSGNDRGMLSPII-PTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEV-GGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLF-LEYDA-----TDNGTFEAVCDGCR-VACD---GCSFDEPPAVPTCSDVMDHGTSTGGK-VTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAG-YCLESYEGPYCSICSDGYASNLGYSC 1031          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.370e-20
Identity = 94/263 (35.74%), Postives = 124/263 (47.15%), Query Frame = 1
Query:   22 FTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGST-AGSYCAKGYAG----------PYCAACDEGYGSGFQYSC 774
            F  N    GG V S  SG+      ++F P   TGC F GN AT  GGA+ +AAG D+V NS+F  N A  Q             XXXXXXXX               + I A +F  N   CPSG +     ++ V D D  R S VCS C   +C D    D  N+ +P C + PD    TG+   T+ETL +  G++R +  SR +  C+  +AC GG T A  YCA+GY G          P CA C +G+     ++C
Sbjct:  531 FDSNSAQIGGAVRSTGSGTTILATGEEF-PVTYTGCNFTGNWATASGGAMESAAGKDLVVNSTFLGNTAS-QXXXXXXXXXXXXXXXXXXXXXADEQGGPAIHNLGFMDGIEACTFADNDVVCPSGFF-----LDFV-DGD--RYSNVCSGCE--ECNDCDVAD--NSEVPTCTITPDHAQSTGS---TVETLSIDRGYWRATPSSRNILACHNADACLGGETGAADYCAEGYEGALKSVSCTREPDCAVCSDGFAESLSFTC 776          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.520e-20
Identity = 89/277 (32.13%), Postives = 122/277 (44.04%), Query Frame = 1
Query:   22 FTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFA------------------------EVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGST-AGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            F  N    GG V S  SG+      ++F P   TGC F GN AT  GGAI +AAG D+V NS+F  N A                        + QGG  +H+                             + I A +F  N   CPSG +     ++ V D D  R S VCS C   +C D   V  D++ +P C + PD    TGN   T+ETL +  G++R +  SR +  C+  +AC+GG T A  YCA+GY    CA C +G+     ++C
Sbjct:  595 FDSNSAQIGGAVRSTGSGTTVLATGEEF-PVTYTGCNFTGNWATASGGAIESAAGKDLVLNSTFLGNTAXXXXXXXXXXXXXXXXXXXXXXXXDEQGGPAIHN-------------------------LGYMDGIEACTFADNHVVCPSGFF-----LDFV-DGD--RYSNVCSGCE--ECNDC--VVADSSEVPTCTITPDHAQSTGN---TIETLSIDPGYWRATPSSRNILACHNADACSGGETGAADYCAEGYED--CAVCSDGFAESLSFTC 828          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 8.960e-20
Identity = 85/254 (33.46%), Postives = 109/254 (42.91%), Query Frame = 1
Query:   22 FTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNAT-IPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGSTAG-SYCAKGYAGPYCAACDEGYGSGFQYSC 774
            FT N    GG V S SSG   +   D   P     C F  N A+  GGAI TAAGYD   NS F  N A V GGAL   G  + L                       +      F  N   C +G Y        +   D  R   VC  C  P       V ++N   +P+C +  D     G    T+ETL+L SG++R ++ S  V  CY E+AC GG T   ++C +GY GPYC+ C EGY     ++C
Sbjct: 1139 FTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGV-GGALRLGGSAI-LTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMY--------LDSVDGDRYQTVCDGC--PVNNSDWIVSVENGDRVPICVVQLDHTRSEGGD-TTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTC 1379          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.640e-18
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 1
Query:   73 GSIWDEEN-DDFGPSNITGCRFDGNRATDGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQD--HTGVDMDNATIPVCDLV 546
            GS+W+ E+ DD GP+N T C F+ N A DGGAIY+AAGYD++++S F  N A    GA LHSG+LV+L                    XX        F +N+++C SG+YG +   +  + S TCR   VC+ C    C +   + V  ++A +P+C+ V
Sbjct:  393 GSVWNVESPDDSGPANTTTCVFERNSAEDGGAIYSAAGYDIISDSWFEDNIAVGSRGAYLHSGLLVSLADTTFVGNRAGAAGLAVASLXXXXXXXXXXFESNTYYCQSGQYGYDISADEDEVSGTCRFDEVCTGCA-VSCAEIPESVVVANDAFVPMCETV 552          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.020e-17
Identity = 83/258 (32.17%), Postives = 111/258 (43.02%), Query Frame = 1
Query:   16 AVFTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITG---CRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGSTA-GSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            A F  N    GG V++  SG++  +EN D  P N T    C F  NRAT  GGAI +AAG D   NS+F  N A   GG  L +G                             ++  ++F  N F C  G Y       L  ++        C  C +  C    G   +    P C  V + +   G + +TLE L +  G++R S  S EV  CY  +AC GG T    YC KGY GPYCA C +GY +   ++C
Sbjct:  618 ARFISNSAQVGGAVSTVGSGNL--KENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRL-AGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMY-------LDYNASGNPYEAACGGC-ETACD---GCFFEPPVPPTCTDVMEHITSAGGT-VTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFAC 860          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.780e-17
Identity = 88/252 (34.92%), Postives = 117/252 (46.43%), Query Frame = 1
Query:   22 FTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRATDGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGGST-AGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            F  N    GG V S  SG+      D+F                  GA+ +AAG D+VANS+F  N A                XXXXXXXXXX             E I A +F  N   CPSG +     ++ V   D  R S VCS C   +C D  GV  D++ +P C + PD    TGN   T+ETL +  G++R +  +  +  C+  +AC GG T A  YCA+GY GPYCA C +G+     ++C
Sbjct:  692 FDSNSAQIGGAVRSTGSGTTILATGDEFPVXXXXXXXXXXXXXXXXGAMESAAGKDLVANSTFLGNTAXXX-XXXXXXXXXXXXXXXXXXXXXXEQGGPAIQNLGFMEGIEACTFADNDAVCPSGFF-----LDFV---DGHRYSDVCSGCE--ECSD-CGV-ADSSEVPTCTITPDHTQSTGN---TIETLSIDPGYWRATPSTIIILACHNSDACLGGETGAADYCAEGYEGPYCAVCSDGFAESLSFTC 927          
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 9.420e-17
Identity = 83/228 (36.40%), Postives = 106/228 (46.49%), Query Frame = 1
Query:  109 PSNITGCRFDGNRAT-DGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALXXXXXXXXXXXXXXXXXXXXXXAETISALSFRTNSFFCPSG---KYGLEEDIELVQDSDTCRMSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLDLMSGFFRTSSKSREVSKCYREEACTGG--STAGSYCAKGYAGPYCAACDEGYGSGFQYSC 774
            P+    CRF  N AT  GGA+ +AAG D+V NS F  N AEV GGAL         XXXXXXX                 T++  SF  N F C      ++    D       D CR  V C  C+  +             +P C  V D     G + +TLETL +  G++R +S S+++  CY  +AC GG   TAG YC + Y GPYC+ C  GY S   YSC
Sbjct:  879 PTKFNRCRFIDNVATASGGAVDSAAGQDIVVNSVFKGNSAEV-GGALRXXXXXXXXXXXXXXXVSGHQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEFDTSGDGTFEAVCDGCR--VACDGCSFDE----------QPAVPTCSDVMDHSTSPGGN-VTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAG-YCLESYEGPYCSICSNGYASNLGYSC 1091          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6704.17738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FUB6_ECTSI5.200e-6355.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWI3_9PHAE4.380e-5243.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2X5_ECTSI1.040e-2036.78Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JMC1_9PHAE1.370e-2035.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP6_9PHAE2.520e-2032.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY65_9PHAE8.960e-2033.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF6_ECTSI2.640e-1837.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI2.020e-1732.17Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FV90_ECTSI2.780e-1734.92Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z1_9PHAE9.420e-1736.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6704contigF-serratus_M_contig6704:16615..18441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue1.1e-24
Seed eggNOG ortholog2880.D7FTT9
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size775
Cds size774
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6704.17738.1prot_F-serratus_M_contig6704.17738.1Fucus serratus malepolypeptideF-serratus_M_contig6704 16615..18441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932059.6074321-CDS-F-serratus_M_contig6704:16614..166641622932059.6074321-CDS-F-serratus_M_contig6704:16614..16664Fucus serratus maleCDSF-serratus_M_contig6704 16615..16664 -
1690964125.8793354-CDS-F-serratus_M_contig6704:16614..166641690964125.8793354-CDS-F-serratus_M_contig6704:16614..16664Fucus serratus maleCDSF-serratus_M_contig6704 16615..16664 -
1622932059.6503284-CDS-F-serratus_M_contig6704:16883..171751622932059.6503284-CDS-F-serratus_M_contig6704:16883..17175Fucus serratus maleCDSF-serratus_M_contig6704 16884..17175 -
1690964125.8962514-CDS-F-serratus_M_contig6704:16883..171751690964125.8962514-CDS-F-serratus_M_contig6704:16883..17175Fucus serratus maleCDSF-serratus_M_contig6704 16884..17175 -
1622932059.6729007-CDS-F-serratus_M_contig6704:17543..177491622932059.6729007-CDS-F-serratus_M_contig6704:17543..17749Fucus serratus maleCDSF-serratus_M_contig6704 17544..17749 -
1690964125.9087944-CDS-F-serratus_M_contig6704:17543..177491690964125.9087944-CDS-F-serratus_M_contig6704:17543..17749Fucus serratus maleCDSF-serratus_M_contig6704 17544..17749 -
1622932059.6871665-CDS-F-serratus_M_contig6704:17915..180891622932059.6871665-CDS-F-serratus_M_contig6704:17915..18089Fucus serratus maleCDSF-serratus_M_contig6704 17916..18089 -
1690964125.920205-CDS-F-serratus_M_contig6704:17915..180891690964125.920205-CDS-F-serratus_M_contig6704:17915..18089Fucus serratus maleCDSF-serratus_M_contig6704 17916..18089 -
1622932059.702103-CDS-F-serratus_M_contig6704:18389..184411622932059.702103-CDS-F-serratus_M_contig6704:18389..18441Fucus serratus maleCDSF-serratus_M_contig6704 18390..18441 -
1690964125.9320974-CDS-F-serratus_M_contig6704:18389..184411690964125.9320974-CDS-F-serratus_M_contig6704:18389..18441Fucus serratus maleCDSF-serratus_M_contig6704 18390..18441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6704.17738.1

>prot_F-serratus_M_contig6704.17738.1 ID=prot_F-serratus_M_contig6704.17738.1|Name=mRNA_F-serratus_M_contig6704.17738.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MSINNAVFTDNYGVWGGGVASFSSGSIWDEENDDFGPSNITGCRFDGNRA
TDGGAIYTAAGYDMVANSSFTRNFAEVQGGALLHSGVLVALTNCTFELNM
AGEDGLAVMSLGIAETISALSFRTNSFFCPSGKYGLEEDIELVQDSDTCR
MSVVCSLCNDPQCQDHTGVDMDNATIPVCDLVPDGVNITGNSGMTLETLD
LMSGFFRTSSKSREVSKCYREEACTGGSTAGSYCAKGYAGPYCAACDEGY
GSGFQYSC
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mRNA from alignment at F-serratus_M_contig6704:16615..18441-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6704.17738.1 ID=mRNA_F-serratus_M_contig6704.17738.1|Name=mRNA_F-serratus_M_contig6704.17738.1|organism=Fucus serratus male|type=mRNA|length=1827bp|location=Sequence derived from alignment at F-serratus_M_contig6704:16615..18441- (Fucus serratus male)
ATGTCCATAAACAACGCAGTATTCACGGACAACTATGGCGTTTGGGGTGG AGGTTGGTTGCAACCAAAGCTATAGAAAAGCGAAGCGTTAGAGAGGGTGG GAGGTTGGAAATGAGACAGCGTGTATGAAATGTCCTCTCTGCATACCCCC AATCCTGCAAACGCAAACATGCTTGATCGCAGCTTGTGCGATAGAGCATA TCTTGGAGCCATTCGAGCTTCTTTTCTTAAATCTTGAAGCCATGATTACC AAAGTAAGTAGTAGTAATGGGAATGGGAGTGCTTCACGCAATGATCCTAA TGTTGATTTACATATCAACAGAAGATTTTGTCGGGATAATCTCAACCTCC AGGTGTCGCCTCTTTTTCTTCTGGATCCATATGGGACGAGGAAAACGATG ACTTCGGCCCCTCCAACATCACTGGATGCCGTTTCGACGGTAACAGGGCA ACTGACGGAGGGGCCATTTATACCGCTGCAGGCTACGATATGGTCGCTAA TTCTTCATTCACAAGAAATTTTGCAGGTAGCTTCTACGGTTAAGCACCTT TAGAATTCTGGACGGAGATGATACCACAGCAATCATTGATTGAGCGTTTT GAGTTACACATATGAACTCCCGAGAAGGGCATCGCTCCACCAACAAACTC TTACCAACCTATTTGTTCTCTTATTTTTACCATTAATGTCAGAGGTTCAA GGCGGTGCGCTCCTGCATTCCGGTGTCCTCGTAGCCCTTACTAACTGTAC CTTTGAGTTGAACATGGCTGGCGAGGACGGACTAGCAGTCATGAGCCTTG GGATTGCAGAGACCATCTCAGCCTTATCGTTCCGAACCAACTCATTCTTC TGTCCTTCGGGCAAGTACGGCTTGGAGGAGGATATCGAGTTGGTCCAGGT GAGACCGTGTCCTACTATTAACAGATGTACAAATTTGTCGGGGTCGTCTC ATTGCAGTAGCGACGATCACTGTATGACTTTGCTGCTGGTACAACTTTTT TCTCGAGCCATAGAAAAATTAGTAGTATTCTTTTGGCGTGACTCTTTTGT ATATAATTCTATATTTTGCACAGTAACTAAGGTTGACTTGATTATGTCTG ATCCCAGTAAGCTAGAACTGCTTCTCAAAATAAATCACGCCATTGTCTGT TGATACACACCAACAAAATTATATAGAATCATGTGACATGTAAACCTATT GTACGCCAAATGCAAACACACGACATCCTCCTTTCTGCGCCTCACCGCTT TCCCCTATTATAGCAGGACTCCGATACCTGTCGTATGAGTGTGGTGTGCT CCCTGTGCAACGATCCACAGTGCCAAGATCATACAGGCGTCGACATGGAC AATGCTACGATACCTGTTTGCGACCTTGTCCCGGATGGGGTGAACATTAC CGGCAACTCTGGGATGACCCTCGAAACGCTTGACCTTATGTCTGGGTTTT TCCGAACGTCTAGTAAGAGCAGAGAAGTATCGAAGTGCTACCGAGAAGAA GCTTGCACGGGAGGCTCAACAGCCGGTAGCTACTGCGCAAAAGGTTACGC TGGCCCATGTGAGGACTTTTATCTGCACATTGCATGGCTGGCAGCCGTCT TGAACACCCATAATTGTTTGGTACAATAAGCCTTGTTTGGAACAGCAATA AATACTGGGTTTGAGAGCAAACTCAATCAGTGTATATTTAGGTGCTTGCT ACATTTGACCACCAACCAACGTGTATTTTCGTTCCTCGCGCCTTCTCCGT CATGTATGCACGACTTATTCTCCAAAGATTGTGCTGCTTGTGATGAAGGA TACGGCTCCGGTTTTCAGTATAGCTGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig6704:16615..18441-

>mRNA_F-serratus_M_contig6704.17738.1 ID=mRNA_F-serratus_M_contig6704.17738.1|Name=mRNA_F-serratus_M_contig6704.17738.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig6704:16615..18441- (Fucus serratus male)
ATGTCCATAAACAACGCAGTATTCACGGACAACTATGGCGTTTGGGGTGG
AGATGTCCATAAACAACGCAGTATTCACGGACAACTATGGCGTTTGGGGT
GGAGGTGTCGCCTCTTTTTCTTCTGGATCCATATGGGACGAGGAAAACGA
TGACTTCGGCCCCTCCAACATCACTGGATGCCGTTTCGACGGTAACAGGG
CAACTGACGGAGGGGCCATTTATACCGCTGCAGGCTACGATATGGTCGCT
AATTCTTCATTCACAAGAAATTTTGCAGGTGTCGCCTCTTTTTCTTCTGG
ATCCATATGGGACGAGGAAAACGATGACTTCGGCCCCTCCAACATCACTG
GATGCCGTTTCGACGGTAACAGGGCAACTGACGGAGGGGCCATTTATACC
GCTGCAGGCTACGATATGGTCGCTAATTCTTCATTCACAAGAAATTTTGC
AGAGGTTCAAGGCGGTGCGCTCCTGCATTCCGGTGTCCTCGTAGCCCTTA
CTAACTGTACCTTTGAGTTGAACATGGCTGGCGAGGACGGACTAGCAGTC
ATGAGCCTTGGGATTGCAGAGACCATCTCAGCCTTATCGTTCCGAACCAA
CTCATTCTTCTGTCCTTCGGGCAAGTACGGCTTGGAGGAGGATATCGAGT
TGGTCCAGAGGTTCAAGGCGGTGCGCTCCTGCATTCCGGTGTCCTCGTAG
CCCTTACTAACTGTACCTTTGAGTTGAACATGGCTGGCGAGGACGGACTA
GCAGTCATGAGCCTTGGGATTGCAGAGACCATCTCAGCCTTATCGTTCCG
AACCAACTCATTCTTCTGTCCTTCGGGCAAGTACGGCTTGGAGGAGGATA
TCGAGTTGGTCCAGGACTCCGATACCTGTCGTATGAGTGTGGTGTGCTCC
CTGTGCAACGATCCACAGTGCCAAGATCATACAGGCGTCGACATGGACAA
TGCTACGATACCTGTTTGCGACCTTGTCCCGGATGGGGTGAACATTACCG
GCAACTCTGGGATGACCCTCGAAACGCTTGACCTTATGTCTGGGTTTTTC
CGAACGTCTAGTAAGAGCAGAGAAGTATCGAAGTGCTACCGAGAAGAAGC
TTGCACGGGAGGCTCAACAGCCGGTAGCTACTGCGCAAAAGGTTACGCTG
GCCCATGACTCCGATACCTGTCGTATGAGTGTGGTGTGCTCCCTGTGCAA
CGATCCACAGTGCCAAGATCATACAGGCGTCGACATGGACAATGCTACGA
TACCTGTTTGCGACCTTGTCCCGGATGGGGTGAACATTACCGGCAACTCT
GGGATGACCCTCGAAACGCTTGACCTTATGTCTGGGTTTTTCCGAACGTC
TAGTAAGAGCAGAGAAGTATCGAAGTGCTACCGAGAAGAAGCTTGCACGG
GAGGCTCAACAGCCGGTAGCTACTGCGCAAAAGGTTACGCTGGCCCATAT
TGTGCTGCTTGTGATGAAGGATACGGCTCCGGTTTTCAGTATAGCTGCAT
TGTGCTGCTTGTGATGAAGGATACGGCTCCGGTTTTCAGTATAGCTGC
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