mRNA_F-serratus_M_contig67.17717.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig67.17717.1
Unique NamemRNA_F-serratus_M_contig67.17717.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.030e-113
Identity = 162/217 (74.65%), Postives = 189/217 (87.10%), Query Frame = 3
Query:  225 APFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESDDGCP 875
            AP QSG+RSM+T+H+T LMLRAK+V+VGDACVGKT+V+QM KSGGHDYPKNYIMTIGVDF VKQ+K+P+TDC+VELFLFDCPGQGVFNKLEQ   GAAYY NAAFVCVVFDVS+RDSFESCGRWLQ VRAALP+   PLPGVVIANK D REGG+++RAVV T+EG  FA QN L+YFETSAA  KGI+ PF +MA++FH TY++ +EGAE + G P
Sbjct:   14 APSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ---GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGEGGLP 227          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 2.270e-89
Identity = 132/164 (80.49%), Postives = 149/164 (90.85%), Query Frame = 3
Query:  225 APFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQ 716
            AP QSG+RSM+T+H+T LMLRAK+V+VGDACVGKT+V+QM KSGGHDYPKNYIMTIGVDF VKQ+K+P+TDC+VELFLFDCPGQGVFNKLEQ   GAAYY NAAFVCVVFDVS+RDSFESCGRWLQ VRAALPS   PLPGVVIANK D REGG+++RAVV T+
Sbjct:   14 APSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ---GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 249 bits (636), Expect = 7.620e-78
Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 3
Query:  252 METSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
            ME  HK +LMLR+K+VIVGDA VGKTA+ QML S GH+YPKNY+MT  VDFSVKQ+++P+ +C VELFLFDC GQGVFNKL+     A +++NA+FVCVVFDV +R+SF+SCGRWLQ VRA  P+   P+PGV+I +K D REG   SRAVV  QEG  FA++N L YFE SAA+  G+E PFQ+MA  FH  Y+  +  AE
Sbjct:    1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDL---NAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAE 195          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.120e-77
Identity = 116/213 (54.46%), Postives = 161/213 (75.59%), Query Frame = 3
Query:  231 FQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESDDG 869
            F+S +RSME++HK +LMLR K+V+VGDACVGK+A++QM   GG  YPKNY+MT GV F VKQ+ IPDT+C VEL+LFDC GQ +FN+ EQ  +    + N ++V VV+DV +RDSF+SC +WLQ VR+   S  +P  GV++ANK D REGG++SRA V+ +EG +FA++N LE+FETSAA  K ++ PF ++AS FH+ Y++ V+ AE+  G
Sbjct:   25 FKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKS---WENTSYVVVVYDVGNRDSFQSCAKWLQGVRSTRQSSMIP--GVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEALSG 232          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.820e-68
Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 3
Query:  234 QSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVE 848
            QSG+RSMETSHKT+++LR K+++VGDACVGKTA+ Q   SGG  YPKNY+MTIG +F+VKQ+ IP+T+ IVELF++DC GQ +FN+L+     + YY NA+ V VV++V++RDS  SC +W+  V+A   SG VPL G  + NK +FR+G +DSRA V   E    AE   + YFETSAA   G++ PFQY+A  F+R Y+E V+
Sbjct:    2 QSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDL---NSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKAIQNSG-VPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ 202          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.230e-64
Identity = 108/209 (51.67%), Postives = 148/209 (70.81%), Query Frame = 3
Query:  231 FQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
            +QS +RSME+ H++ILMLR K+V+VGDA VGK+A++ M  SGG  +PK Y+MT  VDF VKQ+ IP++   VEL+LFDC GQ +FN++E      A+Y NA+F+C+V+DVS+  SFESCG+WLQ V  + PS    LPGV+IANK D   GG   R VV+TQ+G  FA  N L YFETSA  G+  +EPF+++A  F + Y++ +  A+
Sbjct:   11 YQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANN---AHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKYEDTIAHAQ 209          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.820e-63
Identity = 99/207 (47.83%), Postives = 152/207 (73.43%), Query Frame = 3
Query:  237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
            SGIRSM++ HK++ +LR K+VI+GD+CVGK+++LQ+ +SGG  YPKNY+MTIG DF+VKQ+ IPDT+ +VEL++FDC GQ +FN+LE     + YY NAA V VV+D+ ++++ +S  +WL  +++A+ S P  L GV++ NK D+R+G VDSRA V  ++   F++   L YFE SAA   G+ EPF ++A+ F++ Y++ +  A+
Sbjct:   14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEM---NSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAV-SNPSDLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A1W0A8Y6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8Y6_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.030e-62
Identity = 105/208 (50.48%), Postives = 147/208 (70.67%), Query Frame = 3
Query:  237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAES 860
            SG+RSMET+HK+ L+LR K V+VGDA VGKTA+LQ LK+ GH+YPKNYIMT   +  VK   IPDT+ IVEL++ DCPGQ +FN+ E    G+ ++  A+ + +VFDV++++SF+SC +W Q V    P+  V   GV+I NK D +EG  D+   + T++   FA+QN L+YFE SA +G  IE PF +MA+TF + YD++VE AE+
Sbjct:    2 SGLRSMETTHKSTLVLRCKAVVVGDAGVGKTALLQTLKTNGHEYPKNYIMTSSPELVVKSFPIPDTNVIVELYMLDCPGQSIFNQREF---GSIHFEGASMIILVFDVNNKESFKSCTKWYQVVANPAPNHQVS--GVLIGNKCDEKEGNRDA---ILTKDAEDFADQNNLKYFECSARLGTNIETPFLHMANTFKKKYDDLVERAEN 201          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC)

HSP 1 Score: 209 bits (531), Expect = 4.030e-62
Identity = 105/209 (50.24%), Postives = 148/209 (70.81%), Query Frame = 3
Query:  237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESD 863
            SG+RSMET+H + ++LR K V+VGDA +GKTA+LQ LKS GHDYPKNYIMT   +  VK + IP+T+ IVEL+L DCPGQ +FN+ E    G+ ++  A  + +VFDV+S++SF+SC +W Q V  A P+    + GV+I NK D +EG  D+   ++T+E   FAEQN L+YFE SA +G  I+ PF +MA+TF + YD++ E AE++
Sbjct:    2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREF---GSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGNRDA---ISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTFKKKYDDLAERAENN 202          
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.210e-61
Identity = 104/211 (49.29%), Postives = 149/211 (70.62%), Query Frame = 3
Query:  237 SGIRSMETSHKTI--LMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESD 863
            SG+RSMET+HK+   L+LR K+++VGD  VGKTA+LQ  KS GHDYPKNYIMT   +  VK + I +T+ IVEL++FDCPGQ +FN+ E    G+ +++ A+ V VVFDV+S++SF+SC +W Q V  A P+    LPGV++ NK D +EG  D+   ++ +E   FAEQN L+YFE SA +G G++ PFQ+MA  F + YD+  E ++++
Sbjct:    2 SGLRSMETTHKSTVRLVLRCKVMVVGDGAVGKTALLQSFKSNGHDYPKNYIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREF---GSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEGNRDA---ISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAFKKKYDDFAERSDNN 204          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI2.030e-11374.65IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE2.270e-8980.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCC9_9STRA7.620e-7860.89IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S2XVJ0_9STRA4.120e-7754.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3M1Q0_9STRA1.820e-6853.66Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3JRK5_9STRA4.230e-6451.67Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0SQ35_9STRA3.820e-6347.83Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A1W0A8Y6_9STRA4.030e-6250.48Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067BYM3_SAPPC4.030e-6250.24Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KB43_9STRA1.210e-6149.29Aste57867_2355 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:314773..317142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.4
Seed ortholog evalue4.2e-92
Seed eggNOG ortholog2880.D7FJQ1
Preferred nameIFT27
KEGG koko:K07934
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007264,GO:0007275,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0009987,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022008,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031175,GO:0031344,GO:0031410,GO:0031503,GO:0031514,GO:0031982,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035556,GO:0035639,GO:0035720,GO:0035721,GO:0035735,GO:0036094,GO:0036126,GO:0042073,GO:0042490,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043583,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0046907,GO:0048468,GO:0048513,GO:0048666,GO:0048699,GO:0048731,GO:0048839,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060113,GO:0060119,GO:0060122,GO:0060271,GO:0060491,GO:0065007,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0090102,GO:0097159,GO:0097223,GO:0097225,GO:0097228,GO:0097367,GO:0097542,GO:0097708,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1901265,GO:1901363,GO:1902017,GO:1902115
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0079@1,KOG0079@2759
Ec32 ortholog descriptionIFT27, Ras superfamily GTPase
Ec32 orthologEc-06_010640.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04031
Exons5
Model size1311
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932055.5739338-UTR-F-serratus_M_contig67:314772..3149631622932055.5739338-UTR-F-serratus_M_contig67:314772..314963Fucus serratus maleUTRF-serratus_M_contig67 314773..314963 +
1690964123.75807-UTR-F-serratus_M_contig67:314772..3149631690964123.75807-UTR-F-serratus_M_contig67:314772..314963Fucus serratus maleUTRF-serratus_M_contig67 314773..314963 +
1622932055.7170024-UTR-F-serratus_M_contig67:316715..3171421622932055.7170024-UTR-F-serratus_M_contig67:316715..317142Fucus serratus maleUTRF-serratus_M_contig67 316716..317142 +
1690964123.8268187-UTR-F-serratus_M_contig67:316715..3171421690964123.8268187-UTR-F-serratus_M_contig67:316715..317142Fucus serratus maleUTRF-serratus_M_contig67 316716..317142 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932055.5890253-CDS-F-serratus_M_contig67:314963..3151581622932055.5890253-CDS-F-serratus_M_contig67:314963..315158Fucus serratus maleCDSF-serratus_M_contig67 314964..315158 +
1690964123.7712116-CDS-F-serratus_M_contig67:314963..3151581690964123.7712116-CDS-F-serratus_M_contig67:314963..315158Fucus serratus maleCDSF-serratus_M_contig67 314964..315158 +
1622932055.6040492-CDS-F-serratus_M_contig67:315514..3156341622932055.6040492-CDS-F-serratus_M_contig67:315514..315634Fucus serratus maleCDSF-serratus_M_contig67 315515..315634 +
1690964123.7818546-CDS-F-serratus_M_contig67:315514..3156341690964123.7818546-CDS-F-serratus_M_contig67:315514..315634Fucus serratus maleCDSF-serratus_M_contig67 315515..315634 +
1622932055.6248121-CDS-F-serratus_M_contig67:315824..3160341622932055.6248121-CDS-F-serratus_M_contig67:315824..316034Fucus serratus maleCDSF-serratus_M_contig67 315825..316034 +
1690964123.7961183-CDS-F-serratus_M_contig67:315824..3160341690964123.7961183-CDS-F-serratus_M_contig67:315824..316034Fucus serratus maleCDSF-serratus_M_contig67 315825..316034 +
1622932055.6493456-CDS-F-serratus_M_contig67:316294..3164071622932055.6493456-CDS-F-serratus_M_contig67:316294..316407Fucus serratus maleCDSF-serratus_M_contig67 316295..316407 +
1690964123.8061414-CDS-F-serratus_M_contig67:316294..3164071690964123.8061414-CDS-F-serratus_M_contig67:316294..316407Fucus serratus maleCDSF-serratus_M_contig67 316295..316407 +
1622932055.6921868-CDS-F-serratus_M_contig67:316660..3167151622932055.6921868-CDS-F-serratus_M_contig67:316660..316715Fucus serratus maleCDSF-serratus_M_contig67 316661..316715 +
1690964123.815813-CDS-F-serratus_M_contig67:316660..3167151690964123.815813-CDS-F-serratus_M_contig67:316660..316715Fucus serratus maleCDSF-serratus_M_contig67 316661..316715 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17717.1prot_F-serratus_M_contig67.17717.1Fucus serratus malepolypeptideF-serratus_M_contig67 314964..316715 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig67.17717.1

>prot_F-serratus_M_contig67.17717.1 ID=prot_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=polypeptide|length=231bp
MATSPRVLETTAPFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQ
MLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNK
LEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPL
PGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIE
EPFQYMASTFHRTYDEMVEGAESDDGCPLK*
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mRNA from alignment at F-serratus_M_contig67:314773..317142+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig67.17717.1 ID=mRNA_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=mRNA|length=2370bp|location=Sequence derived from alignment at F-serratus_M_contig67:314773..317142+ (Fucus serratus male)
GCGGGGTAACACCACGACGCGGTCACCATAAGTTTTAACTGGTGGAGAGC CCTCCATCACCATACTTTCAAGCGTTCGCATTACGACAAAACCTGAGCGA GCTGAGATCTTTCCCCGTTGTGCGGAAATCGCTTGTCATCGGCAGCTAGT GGCTGTGACCCGAGCTGAAGCCTCCCGGTTTCTGCATCAAGATGGCCACC TCACCGAGAGTTTTGGAAACCACAGCGCCTTTCCAGTCGGGGATCCGGAG CATGGAAACTTCTCACAAGACGATCTTAATGCTTCGGGCGAAGATCGTCA TCGTCGGAGATGCTTGCGTGGGTAAAACGGCAGTGTTACAGATGCTGAAG AGCGGCGGGCACGACTACCCCAAAAATTACATAATGGTGGGTCTTGGTGG AGCAAGGAGTGGGATACGCTACGCCACATCAGTGGCGATTCAGCCATGTA ACGTCTGTGTTGCGTGATTTAGTGGCATCATACACATAAGCTGAAAGCTA TGGAAGTTGAAAGGTGAACGCCATGAGAAGAAAACATCCGGAATATTTGT ACTGTAAACCTTGTGGAATCTTCATAAGAAACCAGCTCTTACGCGGGCTA CCGTTTTCATCTGCGGGGCCAGTTTTTGGCTACTATCAAGCCAAGTGCGT TGCAGCTAGACAGTGCGCCCCCAAGCATTTCTCAAAAGTATTTTCGTTTC TTGCATGAACCCACCGTTGGGACGATGACATCGTCGGTTCAGACTATCGG GGTGGACTTCAGCGTGAAACAGATGAAAATCCCCGATACGGACTGCATCG TTGAGCTCTTTCTCTTTGATTGTCCTGGCCAGGGAGTCTTCAACAAACTT GAGCAGGCGAGAGTCACCAAATAGATTTTCTTCTTGATAGATCGCAAGGC ACCAAACGTTGTGATCGTCGGCAAGCTGCATTCATCAATGGACTTTTTTT AACATACCGGGAATGGATTCTTCTTACAGCATGAGCATACATCTTTAAAA CGGAGCATTCCCTGTATGGCGATAATCGTACGTTTGCAACACCCGATTGG AGCAGGGAGCAGCGTACTACAACAACGCGGCCTTTGTCTGCGTGGTCTTC GACGTGAGCAGCAGGGATTCGTTCGAGAGCTGCGGTCGTTGGTTGCAGGC GGTACGTGCTGCGTTGCCATCGGGGCCGGTGCCCCTGCCAGGGGTCGTAA TAGCAAACAAGGTAGACTTCCGGGAAGGAGGCGTCGATTCACGGGCAGTG GTGACCACCCAGGTACGATCGCTTAGGTGGACGTTCCACCTTAGCAGTTT TAATAGCTTACCGTACGGATTAGGTTGTGGCAAAGAGCAGTCGATTTTAT TATGGATTACTTGTACTACGAAGACGCCTAAACCAACCCAGTTTTAGGTT CGAAGAAAAATGACAGCTTGAAGGTCCCAACAGACTGGTATCGACAGCAT ACCAGTAGCGCTTCAACACGTTTGCCTCATGGTAAATAGCTAAGTTCTCT GTTTTGTGTGACTACGCAAAAGGAAGGGTATCACTTTGCTGAGCAGAACA AGCTTGAGTACTTCGAGACGTCGGCAGCGGTAGGGAAAGGCATTGAAGAA CCATTTCAGTACATGGCATCTACCTTTCATCGAACGTGAGTGACGGTGAA CACGGTTTGTTAGATCATCCTTTCAAGCCGATGGGTAAGGGTGGACCGCC TGCGGACGAGGACTCCTACTCCTCCCGATTCGCAATTCTTAGAAAGCGTG CAGAGTCTATTCCTCAGGACGAAGACGTTGTGCGACGGTAGCTCTGTAAC CCTTTTGAGTGTTAAGTTCGAATTCCGCCATTCTTCCCTTGTCTCCCCGC CTCGTTGTCGGGATCTCGCCCTGTGACGGAAAATGTAGCTACGACGAGAT GGTCGAGGGGGCCGAAAGTGATGACGGGTGCCCGTTGAAGTGAGAGCTCA ACGATGCACGGCTCGAAGGAATATGCCAAGCGCTCATGATGGGAGTTTGA AACACGACAACGCTTGACATTCGTAAAAGTAGCACTTGTGCTGTGATGGT GTTGCTGCAGGCAAGTGCCGGCATGGGGCTTAAATCGTACGTACAATAAA AACTCCACCCGGTGAAATAGTGCGGCGACGTCTGCTTTGGTCGTACCTTG AAGTTGCGCCTTCGTGCGCTTTGGAATTTGTTTTGGGCAGGAATTGGTAA ATTTCACGTTTTACTGCGCAAAAGAAGAAATGGTCGCCTCCGGTACTACT GCGGTCGACTAAGGTATTGCGAAAACTACATTTTTTTGTACCCAAGCGTG GACTTTCTTCTTGAAAACTATCTTTATAACCTCTTCATTAAAATTATGTT CGAATGGGAAGAGGAAATTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig67:314773..317142+

>mRNA_F-serratus_M_contig67.17717.1 ID=mRNA_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=CDS|length=1386bp|location=Sequence derived from alignment at F-serratus_M_contig67:314773..317142+ (Fucus serratus male)
ATGGCCACCTCACCGAGAGTTTTGGAAACCACAGCGCCTTTCCAGTCGGG
GATCCGGAGCATGGAAACTTCTCACAAGACGATCTTAATGCTTCGGGCGA
AGATCGTCATCGTCGGAGATGCTTGCGTGGGTAAAACGGCAGTGTTACAG
ATGCTGAAGAGCGGCGGGCACGACTACCCCAAAAATTACATAATGATGGC
CACCTCACCGAGAGTTTTGGAAACCACAGCGCCTTTCCAGTCGGGGATCC
GGAGCATGGAAACTTCTCACAAGACGATCTTAATGCTTCGGGCGAAGATC
GTCATCGTCGGAGATGCTTGCGTGGGTAAAACGGCAGTGTTACAGATGCT
GAAGAGCGGCGGGCACGACTACCCCAAAAATTACATAATGACTATCGGGG
TGGACTTCAGCGTGAAACAGATGAAAATCCCCGATACGGACTGCATCGTT
GAGCTCTTTCTCTTTGATTGTCCTGGCCAGGGAGTCTTCAACAAACTTGA
GCAGGCGAGAACTATCGGGGTGGACTTCAGCGTGAAACAGATGAAAATCC
CCGATACGGACTGCATCGTTGAGCTCTTTCTCTTTGATTGTCCTGGCCAG
GGAGTCTTCAACAAACTTGAGCAGGCGAGACAGGGAGCAGCGTACTACAA
CAACGCGGCCTTTGTCTGCGTGGTCTTCGACGTGAGCAGCAGGGATTCGT
TCGAGAGCTGCGGTCGTTGGTTGCAGGCGGTACGTGCTGCGTTGCCATCG
GGGCCGGTGCCCCTGCCAGGGGTCGTAATAGCAAACAAGGTAGACTTCCG
GGAAGGAGGCGTCGATTCACGGGCAGTGGTGACCACCCAGCAGGGAGCAG
CGTACTACAACAACGCGGCCTTTGTCTGCGTGGTCTTCGACGTGAGCAGC
AGGGATTCGTTCGAGAGCTGCGGTCGTTGGTTGCAGGCGGTACGTGCTGC
GTTGCCATCGGGGCCGGTGCCCCTGCCAGGGGTCGTAATAGCAAACAAGG
TAGACTTCCGGGAAGGAGGCGTCGATTCACGGGCAGTGGTGACCACCCAG
GAAGGGTATCACTTTGCTGAGCAGAACAAGCTTGAGTACTTCGAGACGTC
GGCAGCGGTAGGGAAAGGCATTGAAGAACCATTTCAGTACATGGCATCTA
CCTTTCATCGAACGAAGGGTATCACTTTGCTGAGCAGAACAAGCTTGAGT
ACTTCGAGACGTCGGCAGCGGTAGGGAAAGGCATTGAAGAACCATTTCAG
TACATGGCATCTACCTTTCATCGAACCTACGACGAGATGGTCGAGGGGGC
CGAAAGTGATGACGGGTGCCCGTTGAAGTGACTACGACGAGATGGTCGAG
GGGGCCGAAAGTGATGACGGGTGCCCGTTGAAGTGA
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