mRNA_F-serratus_M_contig67.17707.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A835Z8W8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W8_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.240e-48 Identity = 101/183 (55.19%), Postives = 127/183 (69.40%), Query Frame = 1
Query: 166 HAAVIAVASGGIG-GSSAFLAPPTHSSSRIRTPAAARAAVTPLMAIPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEE----PKKLFGMF 699
AA I+VA G+ +S F+A P + ARA+ + L ++PLELEG+LD S+ WEVEL LDG TKKVTVPEGTSVL AA+ VFDDPP SC+NG+CTTCAG I EG +S+ +AV LG D A G+TLTCQTYP GPGLKV LN+YD VY QYG++E ++ +K+FG+F
Sbjct: 2 RAACISVALAGLACQASGFIAAPATRVAGCTQ--CARASSSALRSVPLELEGKLDPSKSWEVELVLDGETKKVTVPEGTSVLEAAEMVFDDPPFSCRNGVCTTCAGFIEEGR--DSHLMAVHGLGRDILATGFTLTCQTYPTGPGLKVALNKYDEVYWEQYGKHEKSELDKRAAGERKVFGLF 180
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK) HSP 1 Score: 175 bits (444), Expect = 1.710e-48 Identity = 86/142 (60.56%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 268 ARAAVTPL-MAIPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEEPKKLF 690
AR+ TP+ M +PLELEG+LD S+ WE+EL LDGVTK VTV E VL AA++VFDDPP SC+NG+CTTC+ I EG +GE+YKLAV LG+ ++G+T++CQT+ GPG+K+ LNQYDTVYEMQYGQYE ++ KK F
Sbjct: 25 ARSMRTPMRMGVPLELEGKLDPSKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKDTKKSF 166
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A835Z7P0_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P0_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.980e-41 Identity = 94/186 (50.54%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 157 MKTHAAVIAVASGGIGGSSAFLAPPTHSSSRIRTPAAARAAVTPLMAIPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEEPK-----KLFGMF 699
M+ AAV A G SAFL PT AR T A+P ELE +LD +R WEVEL L+G TK VT+PEGTSVL AA+ VFDDPP SC+NG+C+TCAG I G S + AV LG D +GY LTCQTYP GPG+KV LN+ D VY QYG++ + +E K+FGMF
Sbjct: 1 MRAAAAVAAAMLAGQA--SAFLMAPTL----------ARNTATVRSAMPQELETELDPARTWEVELTLNGETKVVTIPEGTSVLEAAELVFDDPPNSCRNGVCSTCAGHIDGGAN--SVRYAVSGLGQDLLGEGYALTCQTYPAGPGVKVSLNKMDEVYMQQYGKHSEEEQERKMSGGKTKVFGMF 172
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.340e-40 Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 1
Query: 280 VTPLMAIPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEEPKKLFGMF 699
V L +P+ELEGQL+ + +W+V + +G TK +TVPE ++L A++ +F D PCSC+NGICTTCA ++ G ES LAV L +QR KGYTL CQ+Y GPGLKV L +YD VYE QYG+YE +EE KK G+F
Sbjct: 3 VKSLNVVPVELEGQLNPANKWDVSITFNGETKVITVPEDQNILEASEELFGDVPCSCRNGICTTCAAMVTGGE--ESLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYERNQQEEKKKFLGIF 140
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC) HSP 1 Score: 150 bits (379), Expect = 1.150e-39 Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 298 IPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYE 657
+P++LEG+LD SR W +EL DG + V VPEGTSVL AA+ V++DPPC C+NG+CT+CAG I G GE+Y + D+L + + KGY LTCQTY CGPGLKV LN+ + VY MQYG++E
Sbjct: 6 VPVDLEGRLDPSRSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A4D9D4I2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4I2_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.990e-37 Identity = 78/167 (46.71%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 211 SAFLAP--PTHSSSRIRTPAAARAAVTPLMAIPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEE--PKKLFGMF 699
S FL P P+ + S R P + +P +LEG+LD R W+V + L+G TK V+V EGTS+L AA+ F DPPC C+NG+CTTCA + G G S+ A+++L +Q+ G+ L+CQTYPCGPGL+V LN + VYE QY +YE K EE KK F +F
Sbjct: 16 SGFLVPAVPSITFSDSRAPTRLYVGSNAKIDVPPDLEGRLDPKRHWDVVMSLNGETKTVSVSEGTSLLDAAEEAFGDPPCMCRNGVCTTCAAEVTRGGHG-SWVAAIESLSPEQQESGFILSCQTYPCGPGLEVRLNAQEEVYESQYAKYETKAHEELEKKKGFNIF 181
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.820e-36 Identity = 71/134 (52.99%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 298 IPLELEGQLDVSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVEEEPKKLFGMF 699
+PLELEGQLD ++ W+V++ G TK +TV E T +L AA++ +D PCSC+NGICTTCAG + +S K A+ L +Q G+ LTCQT+PCGPGL+V L YDTVYE QYGQYE K E K F +F
Sbjct: 41 VPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKEWD-VPCSCRNGICTTCAGRVIANP--DSKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTEQKSKFNVF 171
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A6P0WYJ5_9CYAN (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Caldora sp. SIO3E6 TaxID=2607806 RepID=A0A6P0WYJ5_9CYAN) HSP 1 Score: 81.6 bits (200), Expect = 3.880e-15 Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 340 WEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQ 651
+ VE++ G T KV VPEG +L A D P SC G+CTTCA I EGT +S + L D +A+GY L C YP LK+ + D VY+ Q+GQ
Sbjct: 5 YTVEIQHQGTTHKVEVPEGNKILETAHNAGIDSPSSCHAGVCTTCAAKILEGTVDQSEGMG---LSPDLQAEGYVLLCVAYPTS-NLKIETEKEDEVYDRQFGQ 104
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: UPI00168A165A (2Fe-2S iron-sulfur cluster-binding protein n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI00168A165A) HSP 1 Score: 76.6 bits (187), Expect = 2.280e-13 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 328 VSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYE 657
+S+ VE++ G T + VPE +L AA+ D P SC G+CTTCAG I G +S + V + +AKGY L C YP LK++ + D VY +Q+GQY+
Sbjct: 1 MSKTHTVEIQHQGKTYTLQVPEDVKILNAAQAAGIDLPNSCNAGVCTTCAGQILAGEVDQSDGMGVSP---ELKAKGYVLLCVAYPRSD-LKIVSEKEDEVYHLQFGQYQ 106
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Match: A0A2T1DE77_9CYAN (Ferredoxin n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1DE77_9CYAN) HSP 1 Score: 76.3 bits (186), Expect = 3.660e-13 Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 328 VSREWEVELELDGVTKKVTVPEGTSVLYAAKRVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAVDALGDDQRAKGYTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYE 657
+S + VEL+ G T ++VPE ++L AA+ D P SC G+CTTCA I +G+ ++ + V + + KGY L C YP LK+ + DTVY++Q+GQ++
Sbjct: 1 MSNTYTVELQHQGTTHTLSVPETETILSAAQAAGLDLPYSCSAGVCTTCAAQILDGSVDQTDGMGVSP---ELQEKGYVLLCVAYPRSD-LKIETEKEDTVYQLQFGQFQ 106 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig67.17707.1 >prot_F-serratus_M_contig67.17707.1 ID=prot_F-serratus_M_contig67.17707.1|Name=mRNA_F-serratus_M_contig67.17707.1|organism=Fucus serratus male|type=polypeptide|length=182bp MKTHAAVIAVASGGIGGSSAFLAPPTHSSSRIRTPAAARAAVTPLMAIPLback to top mRNA from alignment at F-serratus_M_contig67:55810..66303+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig67.17707.1 ID=mRNA_F-serratus_M_contig67.17707.1|Name=mRNA_F-serratus_M_contig67.17707.1|organism=Fucus serratus male|type=mRNA|length=10494bp|location=Sequence derived from alignment at F-serratus_M_contig67:55810..66303+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig67:55810..66303+ >mRNA_F-serratus_M_contig67.17707.1 ID=mRNA_F-serratus_M_contig67.17707.1|Name=mRNA_F-serratus_M_contig67.17707.1|organism=Fucus serratus male|type=CDS|length=1092bp|location=Sequence derived from alignment at F-serratus_M_contig67:55810..66303+ (Fucus serratus male)back to top |