mRNA_F-serratus_M_contig6694.17701.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.240e-23 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 1 SRADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEV---VKQLEALKTK 369
+R + ERE Y+ E + F++L YW R D + + GKV +PA P++ +ARLY G++ TSCQAERNFSAL ++ +R LP KVE+M+ +RLNRHL+ E+ V + +A KTK
Sbjct: 504 TRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTK 630
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.300e-23 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 1 SRADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEV---VKQLEALKTK 369
+R + ERE Y+ E + F++L YW R D + + GKV +PA P++ +ARLY G++ TSCQAERNFSAL ++ +R LP KVE+M+ +RLNRHL+ E+ V + +A KTK
Sbjct: 699 TRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTK 825
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 4.530e-23 Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 1
Query: 1 SRADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGI-DPSGKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEVVKQLEALKTKFDVHAAVSVAAQ 405
+R + ERE Y+ E DF++L +W R D + +G V +PA P++ +ARL+ G++ +SCQAERNFSAL ++ +R L KVE+M+L+RLNRHL+ E+ + + K A SVA Q
Sbjct: 122 NRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQ 257
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 2.560e-22 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 13 VAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLN 309
+ ERE Y+ E + DF+LL +W R D + + GKV +PA P++ +ARL+ G++ TSCQAERNFSAL ++ D R L H+VE+M+L+RLN
Sbjct: 121 LIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 100 bits (250), Expect = 3.780e-22 Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 13 VAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLI 321
+ ERE Y+ E + DF+LL +W R D + + GKV +PA P++ +ARL+ G++ TSCQAERNFSAL ++ D+ L H+VE+M+L+RLN+HL+
Sbjct: 504 LIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLL 607
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 7.330e-22 Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 1
Query: 1 SRADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGI-DPSGKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEVVKQLEALKTKFDVHAAVSVAAQ 405
+R + ERE Y+ E DF++L +W R D + +G V +PA P++ +ARL+ G++ +SCQAERNFSAL ++ +R L KVE+M+L+RLNRHL+ E+ + + K A SVA Q
Sbjct: 687 NRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQ 822
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.590e-21 Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 13 VAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIP---GFAEVVKQLEALKTKFDVHAAVSVAAQ 405
+ ERE Y+ E + F+L+ +W R D + + G+V +PA P++ +ARL+ G++ TSCQAERNFSAL ++ ++R LPH+VE+M+L+RLNR ++ F V + + TK +AA S AAQ
Sbjct: 400 LIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATK---NAAKSAAAQ 531
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.960e-21 Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 13 VAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPS-GKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLI 321
+ ERE Y+ E + F+L+ +W R + + P+ GKV APA P++ +ARL+ G++ TSCQAERNFSAL ++ +R L KVE+M+L+RLNRHL+
Sbjct: 386 LIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 6.370e-20 Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 4 RADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPSGKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEVVKQLEALK 363
R + ERE Y+ E DF LLE+W RS V P PH+ L+ARL+ G+++TSCQAERNFSAL ++ +R+ LP KVE+++ LRLNR IP + +EA K
Sbjct: 363 RGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANK 481
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 7.690e-20 Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 4 RADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPSGKVVAPARWPHIGLLARLYAGVDTTSCQAERNFSALKQVVSDMRAGTLPHKVEKMLLLRLNRHLIPGFAEVVKQLEALK 363
R + ERE Y+ E DF LLE+W RS V P PH+ L+ARL+ G+++TSCQAERNFSAL ++ +R+ LP KVE+++ LRLNR IP + +EA K
Sbjct: 691 RGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANK 809 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6694.17701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6694.17701.1 >prot_F-serratus_M_contig6694.17701.1 ID=prot_F-serratus_M_contig6694.17701.1|Name=mRNA_F-serratus_M_contig6694.17701.1|organism=Fucus serratus male|type=polypeptide|length=135bp SRADVAEREFNAYMKEAAPSNNSDFDLLEYWATRSVDGIDPSGKVVAPARback to top mRNA from alignment at F-serratus_M_contig6694:8232..8636+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6694.17701.1 ID=mRNA_F-serratus_M_contig6694.17701.1|Name=mRNA_F-serratus_M_contig6694.17701.1|organism=Fucus serratus male|type=mRNA|length=405bp|location=Sequence derived from alignment at F-serratus_M_contig6694:8232..8636+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6694:8232..8636+ >mRNA_F-serratus_M_contig6694.17701.1 ID=mRNA_F-serratus_M_contig6694.17701.1|Name=mRNA_F-serratus_M_contig6694.17701.1|organism=Fucus serratus male|type=CDS|length=810bp|location=Sequence derived from alignment at F-serratus_M_contig6694:8232..8636+ (Fucus serratus male)back to top |