mRNA_F-serratus_M_contig669.17699.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig669.17699.1
Unique NamemRNA_F-serratus_M_contig669.17699.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: D7G2J8_ECTSI (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J8_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 2.530e-122
Identity = 181/231 (78.35%), Postives = 210/231 (90.91%), Query Frame = 1
Query:    1 GRSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVEV 693
            GR +GGLASK+D+ L+EIP+KEAVRYKKGNLKWTRSDVK+HS+A ACGLLELGCKAGDT+AMWLPE SEKHVAQ+AAARIGM+VAEVDP L SA AV KILEESGAAVVLVE+++VP+L EAVPELRHY TDSGLPFR +KLPSLRLCIHTGL+RE+ALLHFRSALLY+PPVSPL ++NG++KES+PLHT F EGTGG P+K KTLSHA+V+   SWPT+ +IL K+YVEV
Sbjct:   53 GRFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKAGDTMAMWLPECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLVEESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALLYTPPVSPLAQVNGQIKESAPLHTIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S3XZ81_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ81_HETAK)

HSP 1 Score: 178 bits (452), Expect = 1.030e-47
Identity = 93/236 (39.41%), Postives = 142/236 (60.17%), Query Frame = 1
Query:    1 GRSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPA-----LREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVS-PLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVE 690
            GRS+  +AS+++ A++E   KEAVRY   N+KWTR DV+  +DA A GLLE  C  GD+IA+WLPE SEKHV Q+AAA+ G++ A+ D  + + EA+G  L +SGA V++    +        L +A+PEL  Y  ++G PF  S  P+L+L IHTG D  +   +F+   +  P     L  I   +K+ +PL+  + + +GG   K + ++H   +  + W  V SIL+K+Y+E
Sbjct:   44 GRSLASIASQINSAVAENEYKEAVRYTHKNIKWTRKDVQFQTDALANGLLEAACNPGDSIAVWLPECSEKHVTQLAAAKAGLVFADFDLSIDTPEALGDALADSGAKVLIFNSELDAVNCGRVLFDAIPELSGYYNNTGAPFHSSSFPNLKLMIHTGYDSLAGFHNFKHLPVPHPATGGKLGVILPHLKDDTPLYVKYTKDSGGKATKGEVMTHGTALSSKEWSVVKSILDKQYIE 279          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2XZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH5_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.970e-42
Identity = 87/231 (37.66%), Postives = 140/231 (60.61%), Query Frame = 1
Query:   19 LASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPE-SSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDA-----IVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVEV 693
            +A++L +     P+KEAVRY+  N K TR D+  +S A + GLLEL     DT+ +WLP+ S+EKHVA +AAA++G+ VA+V   +   EA+ ++L ++GA +++++        + AL +AVPEL H+    G+PF    LP LR+  HTG D      +F+  L+++P  S + KI   +K+ +PL+T + +G  G   K +TL++  V+ H +W    +IL  +YVEV
Sbjct:   32 IAAQLKDVTDANPMKEAVRYQDKNFKCTREDIDAYSYALSNGLLELCVAPNDTMVLWLPDDSAEKHVAMLAAAKMGVTVADVSQDVQKPEAIRQVLSDTGARMIMIDTEHPDYNYLHALVKAVPELLHFNDKHGVPFHSHTLPKLRMFFHTGYDVIKGFCNFKHVLMFNPGESQVPKILPFLKDDTPLYTPYTKGPDGMAVKGETLTNGQVLSHSAWKVHSAILGGQYVEV 262          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2CY20_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY20_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.690e-33
Identity = 81/234 (34.62%), Postives = 134/234 (57.26%), Query Frame = 1
Query:   16 GLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLP-ESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAI-----VPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPP---VSPLDKINGEVKESSPLHTNFKEGT-GGAPQKSKTLSHADVMRHESWPTVMSILNKKYV 687
            G+  KL   +   P+ E V++ K NLKW+ +DVK +SDAF+ GL++ G KAGD++A+WLP +++E    + AAARIG+++ E+D  ++ A+A+  IL E+    ++ +           L+E +PEL+HY    G  FR   +PS++  +H  +D    + +F+  ++Y P    + P   +      S+PL  N+   T  GA    + LS  DVM  ++WPTV +IL+KK+ 
Sbjct:   39 GIQEKLATLVDAHPMMETVQFNKQNLKWSMADVKRYSDAFSSGLVDNGWKAGDSLAVWLPADTAESLTVKFAAARIGLLLVEIDMSVSEADAIRSILVENNCKGLIYDLEAGDRHNTDILKEIMPELKHYDDKFGDQFRSRVVPSMKFIMHVNMDLIPGVGNFKYQMVYDPRPALIPPAPDL------SAPLTVNYTSDTLSGA----RVLSQEDVMTEQAWPTVGAILDKKFT 262          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2WCA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCA9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.170e-25
Identity = 68/227 (29.96%), Postives = 121/227 (53.30%), Query Frame = 1
Query:   19 LASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLP-ESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALRE-----AVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKK 681
            ++  L +   ++PLKEA+ +K  N+KW+  D+K HSDA A GLLELG ++GD +A+W+  +  E+ V + A++R G+ + E+D G++  E++ KIL E+ A  ++ +  +     +     A+PEL  +    G  FR   +PS+ L  HTG+D    +++ +  L Y  P S  +     +K+          G+GG    + +L   + ++   W  V  IL ++
Sbjct:   31 ISQNLAQRCEDLPLKEAIAFKVNNVKWSYQDLKEHSDALAAGLLELGWRSGDVLAVWVESDCQEQIVTRFASSRAGLGLVEIDAGVSDPESLRKILNETNAKGLVFDPVMGDRYNQDIVEAALPELASFDDRFGGRFRSRAVPSIGLVAHTGMDLVPGVVNLKHLLAYDAPESRFNSTTSGMKQV------VSYGSGGG---ATSLKEDEALQSAPWNLVSGILRQE 248          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A225WUY5_9STRA (AMP-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUY5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.180e-19
Identity = 61/217 (28.11%), Postives = 116/217 (53.46%), Query Frame = 1
Query:    4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
            R++  + + L+EA+  +P KEA+R  K +++W+  ++K   D  A G L+L  ++GD +A+WLP S+E  + Q+AAAR G+ +A ++P ++ A+ +  ILE+S A+ ++ E       +  V     PEL  ++    + FR      L   I T  +    +++    ++ SP    L  +   + + +PL   + +  G  P+KS  L+H D+++
Sbjct:   17 RTVSTVGAILNEAVDRLPHKEALRSVKQDVRWSFKELKAAVDELANGFLDLQFQSGDVVAVWLPNSAENVLTQLAAARAGLTLAVIEPEVSEAKELAFILEDSRASGLVFEPKQAGRNQTQVVQGLFPELATFRERKEV-FRPKHFRHLHSVITTSWEPVEGMINLNGMMVNSPEPYALQAVTKMLSDKTPLAVTYSKVQGQNPKKSAVLTHGDLLK 232          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: G5A2G9_PHYSP (AMP-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A2G9_PHYSP)

HSP 1 Score: 98.2 bits (243), Expect = 7.990e-19
Identity = 59/217 (27.19%), Postives = 114/217 (52.53%), Query Frame = 1
Query:    4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
            R+   + + LDEA++ +P KEA+R  K +++W+  ++    D  A G L+L  +AGD +A+WLP S+E  + Q+AAAR G+ +A ++P ++ AE +  IL +S AA ++ E       +  +     PEL  ++    + FR  +   L   I T  +    +++    ++ +     +  +   + + +PL   + +  G  P+KS  L+H D+++
Sbjct:   18 RAASTVGAALDEAVARLPHKEALRSVKQDVRWSFKELNAAVDELASGFLDLQFRAGDVVALWLPNSAENVLTQLAAARAGLTLAVIEPEVSQAEELAFILHDSQAAGLVFEPKQAGRNQTEIVQGLFPELATFRERMEV-FRPKQFRHLHSVITTSWEPVEGMINLNGMMVNNAEPYAMKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLK 233          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A484EBX1_BRELC (AMP-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBX1_BRELC)

HSP 1 Score: 98.2 bits (243), Expect = 8.120e-19
Identity = 65/221 (29.41%), Postives = 115/221 (52.04%), Query Frame = 1
Query:    4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDA--------IVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRH 642
            RS   +   LDEA+  +P KEA+R  K +++++  ++    +  A G L+L  ++G+ +A+WLP S E  + Q+AAAR G+ VA ++P ++ AE +  IL++S A+ ++ E          IV  L    PEL  ++    + FR      L   I T  D    +L+    ++ SP    +  ++  + + +PL   + +  G  P+KS+ LSH D++ H
Sbjct:   19 RSASTVGGALDEAVVRMPHKEALRSIKQDVRYSFKELNAAVNELANGFLDLQFESGNVVALWLPNSIENVITQLAAARAGLTVAIIEPEVSQAEELAFILQDSNASGLVFEPKQGGRNQTEIVQGL---FPELATFRQRKEV-FRPKNFRHLHSIITTSWDPVEGMLNLNGMMINSPEPYVMKAVSKLLSKQTPLAVTYSKVDGHMPKKSEVLSHGDLLTH 235          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A662Y0B2_9STRA (AMP-binding domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0B2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.600e-16
Identity = 53/196 (27.04%), Postives = 105/196 (53.57%), Query Frame = 1
Query:    4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNF 576
            R+   + + LDEA++ +P KEA+R  K  ++W+  ++ +  D  A G L+L  ++GD +A+WLP ++E  V Q+AAA+ G+ +A ++P ++  E +  IL++S A+ ++ E  +    + A+     PEL  ++ D    FR  +   L   I TG +    ++H +  ++  P    +  +   + + +PL   +
Sbjct:   25 RAASTVGAALDEAVTRLPHKEALRSIKQEIRWSFKELNDVVDELANGFLDLKFESGDVVAVWLPNNAENVVTQLAAAKAGLTLAVIEPEVSLPEEIAFILQDSKASGLVFEPKMAGRDQTAIVQGLFPELDTFR-DHMEVFRPKQFRHLHSIITTGFEPVEGMIHLKEMMVNCPEPYAMKALTKTLSDKTPLAVTY 219          
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: H3GLQ7_PHYRM (AMP-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLQ7_PHYRM)

HSP 1 Score: 89.7 bits (221), Expect = 5.890e-16
Identity = 54/217 (24.88%), Postives = 113/217 (52.07%), Query Frame = 1
Query:    4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAI-----VPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
            R+   + + LD A++ +P KEA+R  K +++W+  ++    D  A G ++L    GD +A+WLP S+E  + Q+AAA+ G+ +A ++P ++ A+ +  IL++S A+ ++ E  +        ++   PEL  ++ +  + FR      L   I T  +    +++    ++ S     +  +   + + +PL   + +  G  P+KS  L+H D+++
Sbjct:   18 RAASTVGAALDAAVARLPHKEALRSVKQDVRWSFKELSAAVDELANGFVDLQFARGDVVAVWLPNSAENVLTQLAAAKAGLTLAVIEPEVSQADELAFILQDSKASGLVFEPKMQGRNQTEIVQGLFPELASFRENLEV-FRPRNFRHLHNIITTSWEPVEGMVNLNGMMVNSTEPYAMKALTKTLDDKTPLAVTYSKVAGQNPKKSAVLTHGDLLK 233          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J8_ECTSI2.530e-12278.35AMP-binding domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3XZ81_HETAK1.030e-4739.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZH5_9STRA1.970e-4237.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CY20_9STRA3.690e-3334.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WCA9_9STRA2.170e-2529.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A225WUY5_9STRA3.180e-1928.11AMP-binding domain-containing protein n=1 Tax=Phyt... [more]
G5A2G9_PHYSP7.990e-1927.19AMP-binding domain-containing protein n=3 Tax=Phyt... [more]
A0A484EBX1_BRELC8.120e-1929.41AMP-binding domain-containing protein n=1 Tax=Brem... [more]
A0A662Y0B2_9STRA1.600e-1627.04AMP-binding domain-containing protein n=1 Tax=Noth... [more]
H3GLQ7_PHYRM5.890e-1624.88AMP-binding domain-containing protein n=1 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig669contigF-serratus_M_contig669:375221..379781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.4
Seed ortholog evalue1.2e-99
Seed eggNOG ortholog2880.D7G2J8
KEGG rclassRC00002,RC00004,RC00014,RC00017
KEGG koko:K00666,ko:K01897,ko:K14156
KEGG TC4.C.1.1
KEGG ReactionR01021,R01280,R01468
KEGG Pathwayko00061,ko00071,ko00564,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,ko05231,map00061,map00071,map00564,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920,map05231
KEGG ModuleM00086,M00090,M00092
Hectar predicted targeting categoryother localisation
EggNOG free text desc.o-succinylbenzoate-CoA ligase activity
EggNOG OGsCOG0318@1,KOG1177@2759
Ec32 ortholog descriptionAMP-dependent synthetase/ligase
Ec32 orthologEc-11_002500.1
EC2.7.1.32,2.7.1.82,6.2.1.3
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Exons4
Model size1911
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig669.17699.1prot_F-serratus_M_contig669.17699.1Fucus serratus malepolypeptideF-serratus_M_contig669 375230..378566 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932050.188759-UTR-F-serratus_M_contig669:375220..3752291622932050.188759-UTR-F-serratus_M_contig669:375220..375229Fucus serratus maleUTRF-serratus_M_contig669 375221..375229 +
1690964120.674303-UTR-F-serratus_M_contig669:375220..3752291690964120.674303-UTR-F-serratus_M_contig669:375220..375229Fucus serratus maleUTRF-serratus_M_contig669 375221..375229 +
1622932050.2700365-UTR-F-serratus_M_contig669:378566..3797811622932050.2700365-UTR-F-serratus_M_contig669:378566..379781Fucus serratus maleUTRF-serratus_M_contig669 378567..379781 +
1690964120.7385287-UTR-F-serratus_M_contig669:378566..3797811690964120.7385287-UTR-F-serratus_M_contig669:378566..379781Fucus serratus maleUTRF-serratus_M_contig669 378567..379781 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932050.206045-CDS-F-serratus_M_contig669:375229..3753851622932050.206045-CDS-F-serratus_M_contig669:375229..375385Fucus serratus maleCDSF-serratus_M_contig669 375230..375385 +
1690964120.6893604-CDS-F-serratus_M_contig669:375229..3753851690964120.6893604-CDS-F-serratus_M_contig669:375229..375385Fucus serratus maleCDSF-serratus_M_contig669 375230..375385 +
1622932050.225301-CDS-F-serratus_M_contig669:376024..3761801622932050.225301-CDS-F-serratus_M_contig669:376024..376180Fucus serratus maleCDSF-serratus_M_contig669 376025..376180 +
1690964120.702848-CDS-F-serratus_M_contig669:376024..3761801690964120.702848-CDS-F-serratus_M_contig669:376024..376180Fucus serratus maleCDSF-serratus_M_contig669 376025..376180 +
1622932050.2418168-CDS-F-serratus_M_contig669:377856..3780781622932050.2418168-CDS-F-serratus_M_contig669:377856..378078Fucus serratus maleCDSF-serratus_M_contig669 377857..378078 +
1690964120.7162032-CDS-F-serratus_M_contig669:377856..3780781690964120.7162032-CDS-F-serratus_M_contig669:377856..378078Fucus serratus maleCDSF-serratus_M_contig669 377857..378078 +
1622932050.255726-CDS-F-serratus_M_contig669:378413..3785661622932050.255726-CDS-F-serratus_M_contig669:378413..378566Fucus serratus maleCDSF-serratus_M_contig669 378414..378566 +
1690964120.7278295-CDS-F-serratus_M_contig669:378413..3785661690964120.7278295-CDS-F-serratus_M_contig669:378413..378566Fucus serratus maleCDSF-serratus_M_contig669 378414..378566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig669.17699.1

>prot_F-serratus_M_contig669.17699.1 ID=prot_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELG
CKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEE
SGAAVVLVEDAIVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGL
DRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKS
KTLSHADVMRHESWPTVMSILNKKYVEV*
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mRNA from alignment at F-serratus_M_contig669:375221..379781+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig669.17699.1 ID=mRNA_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=mRNA|length=4561bp|location=Sequence derived from alignment at F-serratus_M_contig669:375221..379781+ (Fucus serratus male)
GGTCGATCGATGGGAGGACTGGCGTCGAAGCTGGACGAGGCGCTGTCGGA GATCCCCCTGAAGGAGGCGGTACGCTACAAAAAAGGGAACCTAAAGTGGA CCCGCTCCGACGTGAAGAATCACTCCGACGCATTCGCCTGCGGCCTCCTC GAGCTGGGCTGCAAGGTAAAGACAGGAACGTTCTTCCAATATCCCCCCCC CCTCCCGTCCTAGAGAAAACTAAAATATATGTATATATGTATATATACGT GGAGCTCTACATGTTTTATTTTTTGGTGAAATGGCGTTTTCCACTGCGTT TTTAGCCTGTACTGTACTGTATTGTAATCGCTGTACAGTGCGTGCGGTGC GTGAGATGCATGGTTAGATCGGAAAGTGAAAAGGTAAGCCCCGTGGTTTG TGTTGTTTTGACATTTATTAATAGTTGGATGTTATGAAGACATACTTTTT CGTACGCTTTTTGACCGACTCTTGACTTTTGTACTCTATTTGTACGATAG TGGACCCTATCTTGTAAAAAAAAAAAAGTTTTAATTATTTAGTTTTTTTG TCCCAATATATATTAACAAAAAAAAAAGCAGGGTAGAGCGCAAGCTGGGA CAACCCCTTTCTCCCCAGGCTGTCTAGTAATAGTAATAGATATTTGTACT TGTTGTGTGTTGCGACTCTAGAGCTATCTTGTTTTGTACGGAGTATGTGT TTTTTGTTCACCAGCGGTGTCTTTCTTTGTATCTTTGTTTCTTTTCCGTG GAACCCTGTCCCCTCTCCAAAACAAAAAATAAAACAAAATATTAAACATA TCAGGCAGGGGACACGATAGCCATGTGGCTCCCGGAGAGCTCTGAGAAGC ACGTTGCGCAGATGGCCGCGGCGAGGATAGGAATGATCGTTGCCGAGGTG GACCCCGGTCTCACCTCTGCGGAAGCCGTCGGTAAAATTCTTGAGGAGTC TGGCGCGGCGGTGAGAATGAAGAAATGTCTGGGGTGGGGTGAACGTTGTG GAAGGATTGGGTGACGCTGCTCCTGCACAGTGCACTACGCGTGTTTTAAG TGTAGTCATTGGTATAGTACAGTCACTATAGTGAAGTTTGGTATTATTTA TGTATGTATGGCATCACATACCTGGTATAGCAGAGTATGAATCAACCGGG TAAGGTTGCCAATCCTGCTCGTGATCAGCTGAACAGGGAAAATGAATATT TCCCTGTCCCCGTGCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAG CCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATAGTGAGGCTGAATCTG GCGCTTACTTACGAGATTTTTCCCGATGTCAGCCTGCTCATCTACATACT CAGGCTGAATCTCGTGCTTACTTGTGGGATTCCTCCCGACTTCTTATAGT ATTATTGGTGATGGGCGTTTTGTATGGACCTGACTACACATGGTGTGCAA ATCAAATATTAAAGGATGACTTCCCGAAGTCAGACGGCGACGAACTGTGC GAATCAAGCGTTGATACTGCAGGTAACTTTCCCAAGTCAAAGGGCGACAC ATAGATACCACGAGCTGTGGGCGGGATGGCAAAGTGTCAATCCCAAAAGG CTTGGAAGATTTAGTACTATTTTAGTTAACTTAGTGGCAAGAACAAAACG ATAGATGTGTGAATCAACTATTTGTGTAATATTAAAATCAATACATGGAC GCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCC TGAGTATGGAGATGAGCAGGCTGACGCGGGACGAGACCGCCGAAACCGTC TCGCGAGACCGAATTTTCAGGCACAAACGCGGACAGGGGAATATTCATTT TCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTCATC TATACTCTGGCTATATGTGTGACCATACATACATAATAGCTGTATGTATC AGTTGCACGAGATGATGTGGCTGTGTCAAAAATATGCTTGGGGGGGGGGG GCTATGACTATTAAAATACGGGTTATCCCCCGCTTATCGCGCATGTTTCT TCCGACTATATCCGACACTCCCGCGAAGTTGAGTCGTGCATTCCGAAAAG ATAAAATCATCAGACGTTTATGATACATATCGCGGGAGGAAAGGGGCTTG GCGGCACAGTTCCTCGGTAGAGATGGTGATCCCCAACTGAACGAAATAGC CCCGGGGTTTCAATTGTGCGTTTCGTGGAAGTGATGGATCCAACAGCACG AGAGCTCTGCGTTGGGGTTTTGTCGGTAGGTTTTGCTCTCGAATAGAGAC AGTGTACGAGTGCAGGTGTTGCAGCGTGCGTCGTTTGTCGTTAAGACCAC GAACACCACCGCCGGTTGCATGAAGTTCGCTGAGTTTGTCAGAACTTTGG ACGAACCCATGGCATCCCAATCAGTCAAAATGTATGAGATGATGGCATGT CCCTTGGAGACTAATAAAAGGGAAGTGTTTGGTACCTACAAGTATCACCC ACCCTTCATCGCTCTTGACGTAAATATATCGAAATATGAACGAGATCCCC CCCCCCCCGTTTTTTTTAACAAAAATACGCCGTTTGGTGTATGGTTGTAT TGTTGCATGGTTGCTTTGCTGTGCAACGGCGAGAAGGTGGTGCTGGTCGA GGATGCGATCGTGCCCGCCCTCCGCGAGGCGGTCCCGGAGCTGCGTCACT ACAAGACCGACTCCGGCCTCCCCTTCCGGTGCTCCAAGCTACCATCCCTC AGGCTGTGCATTCACACCGGACTGGACCGAGAGTCTGCTCTCCTTCACTT CCGCAGTGCTCTTCTGTACTCTCCCCCGGTATCTCCGCTCGACAAGATCA ACGGAGAGGTGCGAAGTGGGGCTGGTAGCAACAGACAGCTTAGTTATTCC TGTGCAGCTCGGGTCGAGCGGGTCGTGCGAGATATTCTCGGCCCGCCGTT CTGAGTTTGGTCTTGGGAACACAAAGACGAGCTTGTGCTATGATGTTGGT GACATAACCTGTCTCATGCAACGGCTTAACGGATACTATACTGTACCAGG TACATCGTTATCTTCCCGACGCTCATCCCGCTGAGCTGCCTGTCGCCGTA CACCTCTCTCACCCGAGACCGAGTGTTGCTGCTTTTATATTTGTTTTCTG TTGTGCACCGCAAAATTCTGACACTGCATATATTGTACTGTAGGTGAAGG AGAGCTCTCCACTGCACACGAACTTCAAGGAGGGAACGGGCGGTGCTCCT CAGAAGAGCAAGACCCTCTCCCATGCCGACGTGATGCGACACGAGTCTTG GCCCACGGTGATGTCGATCCTAAACAAGAAGTATGTCGAGGTCTGAGGGC CATCGTCCTAACCCTCCTCTCAAGAGTATTTTCTGCGTCGAGGCCGTGAG AGACGAAGGGAAGGCAAGGGAGTGGAAGGGGGTCCAAGGGACTCGAGTGA GAGAGAGATGTTGTTGTAGCGGCGTTCTAGTGTCTTGGGCGTATTGTCTC AGCGCCGCCATGTCGCACGAGCAGGCGAGTGATTGATATCCACGCAATCC CCGCACCATCTGAGAAAAAAGGGCAGAGGTGTGTGAAGTCCCAGAATTGG CGGCTTCCCGTGTGGGATGTCAAGGGCTGTGGCGGTTCTGTGGCTGCAAG CGTCTCAAGGGACGTTGAGCGTGGCGATGATCTCTCATGCGGCATGTTGT GAATCTTGTACGAGGTGCAGTTGTAAGGGTGGGAGATGTCGAAACTCACT CGCGGGCGCTGTCAGGTATTATTATTATTAATAGTAGTTAGCGACCAGGA TGCGGTGCGGCGTGAGAAGCCCAAAATGACGCCGATCCAATTGCTCGAGA GCCCAAAATGATGTCGTACTTGTCTCGCTTACATGATTCTTGTTGCTGCG GGGTGCACACTCGTCGTTAAAAAACGGTCTCCTCGAGTACACGACGAGTG CATTCTTTCATATCATACGGCGATAACTTTTCACTCGACTGGGGAAAAAA ATAGCAGTACTTGTAACTGTAGTAAAACAATACTATTATATTCGACGGAG GACGTTCAGAGTACAAAGCGCAGCAGCACCGAGTACGAACAAGACGTATT ATTTTTGATGAAGTATGGAAGGAGAAGCACAGCATTTGTTTAAATTAAAT ACTGACTGTTTTCTCCGGGAGGTCTCTACTCTAAACCTGGTACGAATTGC TGGTTTCGGGAGAGTACGAGTGCGGCTCGAGTACGGCTAGTGTAGAGCTA TCATAGTCTGACACGACTTCGTCACACACTCTCCATTTCGTGAAACCCCT TTCCGTCATAACCGTTCTATAAACACGCCTTCCTTACACTACTCTCGGTC GAATCGAAATCATTTCGGGGGAATTCAATTGAGTTCCCCAATCACAATCG CGTTGGATCTACGAAAAGTAACATTTTTGTGGGGGGGGGAGCTCACCGCT ACGTTGCACAATCGCATTTACCGTCATACCGTGTGGGGACAGCGCAGGAC GGGCAAAACCTGGTGCCTGGAACTTTTCAGACAGTAGTATTACATTGTCA TGACTTGCGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig669:375221..379781+

>mRNA_F-serratus_M_contig669.17699.1 ID=mRNA_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig669:375221..379781+ (Fucus serratus male)
ATGGGAGGACTGGCGTCGAAGCTGGACGAGGCGCTGTCGGAGATCCCCCT
GAAGGAGGCGGTACGCTACAAAAAAGGGAACCTAAAGTGGACCCGCTCCG
ACGTGAAGAATCACTCCGACGCATTCGCCTGCGGCCTCCTCGAGCTGGGC
TGCAAGATGGGAGGACTGGCGTCGAAGCTGGACGAGGCGCTGTCGGAGAT
CCCCCTGAAGGAGGCGGTACGCTACAAAAAAGGGAACCTAAAGTGGACCC
GCTCCGACGTGAAGAATCACTCCGACGCATTCGCCTGCGGCCTCCTCGAG
CTGGGCTGCAAGGCAGGGGACACGATAGCCATGTGGCTCCCGGAGAGCTC
TGAGAAGCACGTTGCGCAGATGGCCGCGGCGAGGATAGGAATGATCGTTG
CCGAGGTGGACCCCGGTCTCACCTCTGCGGAAGCCGTCGGTAAAATTCTT
GAGGAGTCTGGCGCGGCGGCAGGGGACACGATAGCCATGTGGCTCCCGGA
GAGCTCTGAGAAGCACGTTGCGCAGATGGCCGCGGCGAGGATAGGAATGA
TCGTTGCCGAGGTGGACCCCGGTCTCACCTCTGCGGAAGCCGTCGGTAAA
ATTCTTGAGGAGTCTGGCGCGGCGGTGGTGCTGGTCGAGGATGCGATCGT
GCCCGCCCTCCGCGAGGCGGTCCCGGAGCTGCGTCACTACAAGACCGACT
CCGGCCTCCCCTTCCGGTGCTCCAAGCTACCATCCCTCAGGCTGTGCATT
CACACCGGACTGGACCGAGAGTCTGCTCTCCTTCACTTCCGCAGTGCTCT
TCTGTACTCTCCCCCGGTATCTCCGCTCGACAAGATCAACGGAGAGGTGG
TGCTGGTCGAGGATGCGATCGTGCCCGCCCTCCGCGAGGCGGTCCCGGAG
CTGCGTCACTACAAGACCGACTCCGGCCTCCCCTTCCGGTGCTCCAAGCT
ACCATCCCTCAGGCTGTGCATTCACACCGGACTGGACCGAGAGTCTGCTC
TCCTTCACTTCCGCAGTGCTCTTCTGTACTCTCCCCCGGTATCTCCGCTC
GACAAGATCAACGGAGAGGTGAAGGAGAGCTCTCCACTGCACACGAACTT
CAAGGAGGGAACGGGCGGTGCTCCTCAGAAGAGCAAGACCCTCTCCCATG
CCGACGTGATGCGACACGAGTCTTGGCCCACGGTGATGTCGATCCTAAAC
AAGAAGTATGTCGAGGTCTGAGTGAAGGAGAGCTCTCCACTGCACACGAA
CTTCAAGGAGGGAACGGGCGGTGCTCCTCAGAAGAGCAAGACCCTCTCCC
ATGCCGACGTGATGCGACACGAGTCTTGGCCCACGGTGATGTCGATCCTA
AACAAGAAGTATGTCGAGGTCTGA
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