mRNA_F-serratus_M_contig669.17699.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: D7G2J8_ECTSI (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J8_ECTSI) HSP 1 Score: 373 bits (957), Expect = 2.530e-122 Identity = 181/231 (78.35%), Postives = 210/231 (90.91%), Query Frame = 1
Query: 1 GRSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVEV 693
GR +GGLASK+D+ L+EIP+KEAVRYKKGNLKWTRSDVK+HS+A ACGLLELGCKAGDT+AMWLPE SEKHVAQ+AAARIGM+VAEVDP L SA AV KILEESGAAVVLVE+++VP+L EAVPELRHY TDSGLPFR +KLPSLRLCIHTGL+RE+ALLHFRSALLY+PPVSPL ++NG++KES+PLHT F EGTGG P+K KTLSHA+V+ SWPT+ +IL K+YVEV
Sbjct: 53 GRFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKAGDTMAMWLPECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLVEESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALLYTPPVSPLAQVNGQIKESAPLHTIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S3XZ81_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ81_HETAK) HSP 1 Score: 178 bits (452), Expect = 1.030e-47 Identity = 93/236 (39.41%), Postives = 142/236 (60.17%), Query Frame = 1
Query: 1 GRSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPA-----LREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVS-PLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVE 690
GRS+ +AS+++ A++E KEAVRY N+KWTR DV+ +DA A GLLE C GD+IA+WLPE SEKHV Q+AAA+ G++ A+ D + + EA+G L +SGA V++ + L +A+PEL Y ++G PF S P+L+L IHTG D + +F+ + P L I +K+ +PL+ + + +GG K + ++H + + W V SIL+K+Y+E
Sbjct: 44 GRSLASIASQINSAVAENEYKEAVRYTHKNIKWTRKDVQFQTDALANGLLEAACNPGDSIAVWLPECSEKHVTQLAAAKAGLVFADFDLSIDTPEALGDALADSGAKVLIFNSELDAVNCGRVLFDAIPELSGYYNNTGAPFHSSSFPNLKLMIHTGYDSLAGFHNFKHLPVPHPATGGKLGVILPHLKDDTPLYVKYTKDSGGKATKGEVMTHGTALSSKEWSVVKSILDKQYIE 279
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2XZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH5_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.970e-42 Identity = 87/231 (37.66%), Postives = 140/231 (60.61%), Query Frame = 1
Query: 19 LASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPE-SSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDA-----IVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKKYVEV 693
+A++L + P+KEAVRY+ N K TR D+ +S A + GLLEL DT+ +WLP+ S+EKHVA +AAA++G+ VA+V + EA+ ++L ++GA +++++ + AL +AVPEL H+ G+PF LP LR+ HTG D +F+ L+++P S + KI +K+ +PL+T + +G G K +TL++ V+ H +W +IL +YVEV
Sbjct: 32 IAAQLKDVTDANPMKEAVRYQDKNFKCTREDIDAYSYALSNGLLELCVAPNDTMVLWLPDDSAEKHVAMLAAAKMGVTVADVSQDVQKPEAIRQVLSDTGARMIMIDTEHPDYNYLHALVKAVPELLHFNDKHGVPFHSHTLPKLRMFFHTGYDVIKGFCNFKHVLMFNPGESQVPKILPFLKDDTPLYTPYTKGPDGMAVKGETLTNGQVLSHSAWKVHSAILGGQYVEV 262
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2CY20_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY20_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.690e-33 Identity = 81/234 (34.62%), Postives = 134/234 (57.26%), Query Frame = 1
Query: 16 GLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLP-ESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAI-----VPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPP---VSPLDKINGEVKESSPLHTNFKEGT-GGAPQKSKTLSHADVMRHESWPTVMSILNKKYV 687
G+ KL + P+ E V++ K NLKW+ +DVK +SDAF+ GL++ G KAGD++A+WLP +++E + AAARIG+++ E+D ++ A+A+ IL E+ ++ + L+E +PEL+HY G FR +PS++ +H +D + +F+ ++Y P + P + S+PL N+ T GA + LS DVM ++WPTV +IL+KK+
Sbjct: 39 GIQEKLATLVDAHPMMETVQFNKQNLKWSMADVKRYSDAFSSGLVDNGWKAGDSLAVWLPADTAESLTVKFAAARIGLLLVEIDMSVSEADAIRSILVENNCKGLIYDLEAGDRHNTDILKEIMPELKHYDDKFGDQFRSRVVPSMKFIMHVNMDLIPGVGNFKYQMVYDPRPALIPPAPDL------SAPLTVNYTSDTLSGA----RVLSQEDVMTEQAWPTVGAILDKKFT 262
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A7S2WCA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCA9_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.170e-25 Identity = 68/227 (29.96%), Postives = 121/227 (53.30%), Query Frame = 1
Query: 19 LASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLP-ESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALRE-----AVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRHESWPTVMSILNKK 681
++ L + ++PLKEA+ +K N+KW+ D+K HSDA A GLLELG ++GD +A+W+ + E+ V + A++R G+ + E+D G++ E++ KIL E+ A ++ + + + A+PEL + G FR +PS+ L HTG+D +++ + L Y P S + +K+ G+GG + +L + ++ W V IL ++
Sbjct: 31 ISQNLAQRCEDLPLKEAIAFKVNNVKWSYQDLKEHSDALAAGLLELGWRSGDVLAVWVESDCQEQIVTRFASSRAGLGLVEIDAGVSDPESLRKILNETNAKGLVFDPVMGDRYNQDIVEAALPELASFDDRFGGRFRSRAVPSIGLVAHTGMDLVPGVVNLKHLLAYDAPESRFNSTTSGMKQV------VSYGSGGG---ATSLKEDEALQSAPWNLVSGILRQE 248
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A225WUY5_9STRA (AMP-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUY5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.180e-19 Identity = 61/217 (28.11%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
R++ + + L+EA+ +P KEA+R K +++W+ ++K D A G L+L ++GD +A+WLP S+E + Q+AAAR G+ +A ++P ++ A+ + ILE+S A+ ++ E + V PEL ++ + FR L I T + +++ ++ SP L + + + +PL + + G P+KS L+H D+++
Sbjct: 17 RTVSTVGAILNEAVDRLPHKEALRSVKQDVRWSFKELKAAVDELANGFLDLQFQSGDVVAVWLPNSAENVLTQLAAARAGLTLAVIEPEVSEAKELAFILEDSRASGLVFEPKQAGRNQTQVVQGLFPELATFRERKEV-FRPKHFRHLHSVITTSWEPVEGMINLNGMMVNSPEPYALQAVTKMLSDKTPLAVTYSKVQGQNPKKSAVLTHGDLLK 232
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: G5A2G9_PHYSP (AMP-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A2G9_PHYSP) HSP 1 Score: 98.2 bits (243), Expect = 7.990e-19 Identity = 59/217 (27.19%), Postives = 114/217 (52.53%), Query Frame = 1
Query: 4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
R+ + + LDEA++ +P KEA+R K +++W+ ++ D A G L+L +AGD +A+WLP S+E + Q+AAAR G+ +A ++P ++ AE + IL +S AA ++ E + + PEL ++ + FR + L I T + +++ ++ + + + + + +PL + + G P+KS L+H D+++
Sbjct: 18 RAASTVGAALDEAVARLPHKEALRSVKQDVRWSFKELNAAVDELASGFLDLQFRAGDVVALWLPNSAENVLTQLAAARAGLTLAVIEPEVSQAEELAFILHDSQAAGLVFEPKQAGRNQTEIVQGLFPELATFRERMEV-FRPKQFRHLHSVITTSWEPVEGMINLNGMMVNNAEPYAMKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLK 233
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A484EBX1_BRELC (AMP-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBX1_BRELC) HSP 1 Score: 98.2 bits (243), Expect = 8.120e-19 Identity = 65/221 (29.41%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDA--------IVPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMRH 642
RS + LDEA+ +P KEA+R K +++++ ++ + A G L+L ++G+ +A+WLP S E + Q+AAAR G+ VA ++P ++ AE + IL++S A+ ++ E IV L PEL ++ + FR L I T D +L+ ++ SP + ++ + + +PL + + G P+KS+ LSH D++ H
Sbjct: 19 RSASTVGGALDEAVVRMPHKEALRSIKQDVRYSFKELNAAVNELANGFLDLQFESGNVVALWLPNSIENVITQLAAARAGLTVAIIEPEVSQAEELAFILQDSNASGLVFEPKQGGRNQTEIVQGL---FPELATFRQRKEV-FRPKNFRHLHSIITTSWDPVEGMLNLNGMMINSPEPYVMKAVSKLLSKQTPLAVTYSKVDGHMPKKSEVLSHGDLLTH 235
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: A0A662Y0B2_9STRA (AMP-binding domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0B2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.600e-16 Identity = 53/196 (27.04%), Postives = 105/196 (53.57%), Query Frame = 1
Query: 4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAIVPALREAV-----PELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNF 576
R+ + + LDEA++ +P KEA+R K ++W+ ++ + D A G L+L ++GD +A+WLP ++E V Q+AAA+ G+ +A ++P ++ E + IL++S A+ ++ E + + A+ PEL ++ D FR + L I TG + ++H + ++ P + + + + +PL +
Sbjct: 25 RAASTVGAALDEAVTRLPHKEALRSIKQEIRWSFKELNDVVDELANGFLDLKFESGDVVAVWLPNNAENVVTQLAAAKAGLTLAVIEPEVSLPEEIAFILQDSKASGLVFEPKMAGRDQTAIVQGLFPELDTFR-DHMEVFRPKQFRHLHSIITTGFEPVEGMIHLKEMMVNCPEPYAMKALTKTLSDKTPLAVTY 219
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Match: H3GLQ7_PHYRM (AMP-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLQ7_PHYRM) HSP 1 Score: 89.7 bits (221), Expect = 5.890e-16 Identity = 54/217 (24.88%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 4 RSMGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGCKAGDTIAMWLPESSEKHVAQMAAARIGMIVAEVDPGLTSAEAVGKILEESGAAVVLVEDAI-----VPALREAVPELRHYKTDSGLPFRCSKLPSLRLCIHTGLDRESALLHFRSALLYSPPVSPLDKINGEVKESSPLHTNFKEGTGGAPQKSKTLSHADVMR 639
R+ + + LD A++ +P KEA+R K +++W+ ++ D A G ++L GD +A+WLP S+E + Q+AAA+ G+ +A ++P ++ A+ + IL++S A+ ++ E + ++ PEL ++ + + FR L I T + +++ ++ S + + + + +PL + + G P+KS L+H D+++
Sbjct: 18 RAASTVGAALDAAVARLPHKEALRSVKQDVRWSFKELSAAVDELANGFVDLQFARGDVVAVWLPNSAENVLTQLAAAKAGLTLAVIEPEVSQADELAFILQDSKASGLVFEPKMQGRNQTEIVQGLFPELASFRENLEV-FRPRNFRHLHNIITTSWEPVEGMVNLNGMMVNSTEPYAMKALTKTLDDKTPLAVTYSKVAGQNPKKSAVLTHGDLLK 233 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig669.17699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig669.17699.1 >prot_F-serratus_M_contig669.17699.1 ID=prot_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=polypeptide|length=229bp MGGLASKLDEALSEIPLKEAVRYKKGNLKWTRSDVKNHSDAFACGLLELGback to top mRNA from alignment at F-serratus_M_contig669:375221..379781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig669.17699.1 ID=mRNA_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=mRNA|length=4561bp|location=Sequence derived from alignment at F-serratus_M_contig669:375221..379781+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig669:375221..379781+ >mRNA_F-serratus_M_contig669.17699.1 ID=mRNA_F-serratus_M_contig669.17699.1|Name=mRNA_F-serratus_M_contig669.17699.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig669:375221..379781+ (Fucus serratus male)back to top |