mRNA_F-serratus_M_contig669.17697.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A6H5JMR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR4_9PHAE) HSP 1 Score: 161 bits (408), Expect = 9.880e-42 Identity = 78/110 (70.91%), Postives = 93/110 (84.55%), Query Frame = 3
Query: 57 EDEWDKEDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELK-PQKPLPAITTF 383
E E ++ED GS MFSYAVLTT AAPR+ WLHERMP+ILRG++DA W+ +G Q+AS FL++HTPY+G DLVWHPVSK+MN+MRYD EDCSAA+ELK P KPLPAITTF
Sbjct: 209 EREVEEEDRGGSLMFSYAVLTTKAAPRLEWLHERMPVILRGSQDAAAWMSCKG-QEASKFLKNHTPYSGEDLVWHPVSKQMNTMRYDAEDCSAAIELKEPAKPLPAITTF 317
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A7S3XYY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYY6_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 7.370e-21 Identity = 47/110 (42.73%), Postives = 75/110 (68.18%), Query Frame = 3
Query: 81 DRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWL-----RVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKK 395
++ + ++ VLTT+A+PR+ WLH RMP++L G +A RWL +VEG + A+A L + PYN DLVWHPV++++N + Y+ DC+ +ELK +P IT+FF+++
Sbjct: 1 EKSGPIKTFTVLTTAASPRLAWLHRRMPLLL-GTGEARRWLATGGDKVEG-ESAAALLATLQPYNEDDLVWHPVTQRLNKIGYNESDCAEPIELKE---IPKITSFFQQR 105
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A835Z2X9_9STRA (DUF159-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.790e-18 Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 3
Query: 75 EDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVE 344
E+D ++++ +LTT ++PR+ WLH+RMP ++ AE A RWL G ASA L S P + +D+VWHPVSK+MNS++Y GEDC VE
Sbjct: 172 EEDDPDHLYTFTILTTDSSPRLAWLHDRMPAVI-SAEAARRWLHA-GVDAASA-LSSIAPNDSADIVWHPVSKRMNSVKYQGEDCMEPVE 258
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A5J4XGC5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XGC5_9CHLO) HSP 1 Score: 90.5 bits (223), Expect = 1.890e-16 Identity = 52/130 (40.00%), Postives = 68/130 (52.31%), Query Frame = 3
Query: 96 MFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKKPKSPPRSPSSSSGAADVKTETRWTENGKAV 485
+++Y ++TT + R+ WLH+RMP+IL E WL + F TPYNG DLVWHPVS M+SM Y D S VELK I +FFK ++S A T+T TE+GKA
Sbjct: 152 LYTYTIMTTDSFRRIQWLHDRMPVILTSDEQVAAWLDTKPLSD-KVFNSICTPYNGEDLVWHPVSPSMSSMSYQSPDASQNVELKKGN----IASFFK----------TASKRDAKPATQTADTESGKAA 266
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A2P6PTZ5_ROSCH (Putative SOS response associated peptidase (SRAP) n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PTZ5_ROSCH) HSP 1 Score: 86.7 bits (213), Expect = 1.350e-15 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 3
Query: 60 DEWDKEDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKK 395
D W E+ G ++++ ++TTS++ + WLH+RMP+IL E + WL S L+ PY GSDLVW+PV+ M + ++G +CS ++LK + +IT FF K
Sbjct: 163 DSW--ENSEGEKLYTFTIITTSSSSALAWLHDRMPVILGDKESIDTWLNDSSSSNFDKLLK---PYEGSDLVWYPVTPAMGKVSFNGPECSNEIQLKTEG-TNSITKFFSTK 268
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A2V0PQH9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQH9_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 1.930e-14 Identity = 46/112 (41.07%), Postives = 62/112 (55.36%), Query Frame = 3
Query: 60 DEWDKEDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKK 395
DEW D G + S+ +LTT +AP+++WLH+RMP +LRG D E WL E + L+ PYNG DL WHPV+ M+ Y G D V ++ +I FFK K
Sbjct: 227 DEWT--DPEGQKVRSFTMLTTDSAPKLSWLHDRMPALLRGDADVEAWLGPEPN------LKVIRPYNGDDLAWHPVTPAMSKPSYQGPDACRDV----RQSKGSIHAFFKPK 326
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A5J9UQI9_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UQI9_9POAL) HSP 1 Score: 84.0 bits (206), Expect = 2.870e-14 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 3
Query: 87 GSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHT-PYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKP-QKPLPAITTFFKKK 395
G +M+++ +LTT A+ + WLH+RMP+IL + WL AS LE T PY GSDLVW+PV+ M +DG +C V + P +KP I+ FF KK
Sbjct: 177 GETMYTFTILTTRASTSLKWLHDRMPVILGNKDSVSAWLN-----DASVKLEEMTTPYEGSDLVWYPVTSAMGKTSFDGPECIKEVRMGPSEKP---ISKFFTKK 273
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: UPI0009BD54F3 (uncharacterized protein LOC18440126 isoform X1 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BD54F3) HSP 1 Score: 82.4 bits (202), Expect = 8.500e-14 Identity = 45/138 (32.61%), Postives = 70/138 (50.72%), Query Frame = 3
Query: 60 DEWDKEDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKKPKSPPRSPSSSSGAADVKTETRWTEN 473
D W E+ G ++++ +LTT + + WLH+RMP+IL E + WL + S + + L+ PY GSDLVW+PV+ M + + G +C ++LK + F + K P S S AA+ T EN
Sbjct: 161 DTW--ENSEGEGLYTFTILTTRCSSALDWLHDRMPVILGNKEAIDAWLNITPSPKVDSLLQ---PYEGSDLVWYPVTPAMGKIFFAGPECIKEIQLKSENKNTISKLFMQSHNKKQPISEPSIRKAAEDSTHGHTFEN 293
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: W1PPG9_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PPG9_AMBTC) HSP 1 Score: 82.4 bits (202), Expect = 9.570e-14 Identity = 45/138 (32.61%), Postives = 70/138 (50.72%), Query Frame = 3
Query: 60 DEWDKEDDRGSSMFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESHTPYNGSDLVWHPVSKKMNSMRYDGEDCSAAVELKPQKPLPAITTFFKKKPKSPPRSPSSSSGAADVKTETRWTEN 473
D W E+ G ++++ +LTT + + WLH+RMP+IL E + WL + S + + L+ PY GSDLVW+PV+ M + + G +C ++LK + F + K P S S AA+ T EN
Sbjct: 182 DTW--ENSEGEGLYTFTILTTRCSSALDWLHDRMPVILGNKEAIDAWLNITPSPKVDSLLQ---PYEGSDLVWYPVTPAMGKIFFAGPECIKEIQLKSENKNTISKLFMQSHNKKQPISEPSIRKAAEDSTHGHTFEN 314
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Match: A0A4D9D4F3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4F3_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.360e-13 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 3
Query: 96 MFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLR--VEGSQQASAFLESHTPYNGS-----------DLVWHPVSKKMNSMRYDGEDCSAAVEL 347
FS+ +LTT AAP WLH+RMP+IL+ E+ E WL+ EG+ + + L G +L+ PVSK+MNSM Y+GEDC+ + L
Sbjct: 72 FFSFTILTTEAAPSFAWLHDRMPLILQSEEEEEAWLKGGAEGAPRIAEILPKLWGQKGEGKGKQGGREAPELICEPVSKRMNSMAYEGEDCAVPIVL 168 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig669.17697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig669.17697.1 >prot_F-serratus_M_contig669.17697.1 ID=prot_F-serratus_M_contig669.17697.1|Name=mRNA_F-serratus_M_contig669.17697.1|organism=Fucus serratus male|type=polypeptide|length=298bp MFSYAVLTTSAAPRVTWLHERMPIILRGAEDAERWLRVEGSQQASAFLESback to top mRNA from alignment at F-serratus_M_contig669:352443..354916- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig669.17697.1 ID=mRNA_F-serratus_M_contig669.17697.1|Name=mRNA_F-serratus_M_contig669.17697.1|organism=Fucus serratus male|type=mRNA|length=2474bp|location=Sequence derived from alignment at F-serratus_M_contig669:352443..354916- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig669:352443..354916- >mRNA_F-serratus_M_contig669.17697.1 ID=mRNA_F-serratus_M_contig669.17697.1|Name=mRNA_F-serratus_M_contig669.17697.1|organism=Fucus serratus male|type=CDS|length=1788bp|location=Sequence derived from alignment at F-serratus_M_contig669:352443..354916- (Fucus serratus male)back to top |