mRNA_F-serratus_M_contig664.17650.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 346 bits (888), Expect = 5.890e-108 Identity = 160/303 (52.81%), Postives = 225/303 (74.26%), Query Frame = 1
Query: 505 NVCPCGVDVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLP-GGIRMSSSNMPLECREFGGRKVWARMEKDMMQGHRQLAATQTFEDWVLSFTH-MVAPEFCAAFVTKGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALL 1407
+VCP G VC DPH+QGLRGQ ++W+GVDG WY+L+KDD D+ INVR TAPLP++FPDRQ +T +AVLS+GHS+V+EV+ PY+V T GC E VSPCLA+GGL + +D + ++ L + V + G + +SSSN+P+EC++FGG ++WARM +DM++G R+L ++ E+W+L + H M AP +CA ++ + DL+ +QSD A+ +I TPT VRL+ G+N + G+ + GR LP+L+FWQMGVG++GL +++ LSGLLGET+R V D G VMEG A G IEDYRVS+A D+ F LL
Sbjct: 103 SVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLL 405
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 318 bits (815), Expect = 1.380e-98 Identity = 145/296 (48.99%), Postives = 216/296 (72.97%), Query Frame = 1
Query: 526 DVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGG-IRMSSSNMPLECREFGGRKVWARMEKDMMQGHRQLAATQTFEDWVLSFT-HMVAPEFCAAFVTKGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALL 1407
D+ DPH++GLRGQ + W+GVDG WY+LVKDD DL INVR TAPLP++FPDRQ +T +A++S+G+S+V+EV+ PY++ T GC E VSPCLA+GGL + +DG+ ++ L + + + G + MS+SN+P+ECR+FGG ++WARM +D+++ RQL ++ E+W+L + +M A +CA ++ + DL+ +Q++ A+ +I TPT VRL+ G+N + G+ + GR LP+L+FWQM VG++GL +++ LSGLLGET+R V G VMEG+ A G +EDYRVS A + FALL
Sbjct: 11 DMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALL 306
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 328 bits (840), Expect = 2.090e-97 Identity = 162/303 (53.47%), Postives = 216/303 (71.29%), Query Frame = 1
Query: 508 VCPCGVDVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVD-TPGCSE-DVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWARMEKDMMQGHRQLAATQTFEDWVLSFTHMVAPEFCAAFVTKGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALLH 1410
+CP G +C DPH++GL GQ ++W GVDG WY+ VKD + DL++NVR TAPLP+DFPDRQ +TG++V+S+GHSLV+EV PYS D GC + +PCLA+GGLSV +DGE L P LPGGI +S+ N+P++C +FGG K+WAR + ++ R+L A Q+FEDWVLSFT M A ++C ++++ L+ VQS A+ +IVTP VVRL+VGI ++ + D GR LP+LD WQM VG+ GLSLE+E L+G+LGET+R V D +G+ VM G A G EDYRVS MDFALLH
Sbjct: 394 ICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLRA-QSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLH 694
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE) HSP 1 Score: 292 bits (748), Expect = 3.290e-88 Identity = 148/290 (51.03%), Postives = 202/290 (69.66%), Query Frame = 1
Query: 556 LRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVDTPGCSED--VSPCLADGGLSVALDGELIEF---LTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWAR-MEKDMMQGHRQLAATQTFEDWVLSFTHMVAPEFCAAFVTKGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALL 1407
L GQ ++W G+DG WY+LV+D + DL +NVR TAP P +FPDRQ +TG++V++ GHSLV+EV +PY DT G D +PCLA+GGLSV +DGE L D +LPGGI++S++N+P++C +FGG K+ AR +M+G R L + +TFE+WVLSF HM A ++C ++ DLS VQS QA+ +I+TP VVR +VGI ++ G + GR +P+LD W+M VG+ GLSLE+ETL+G+LGET+R V+D G VM+G A G EDYRVS A DFALL
Sbjct: 61 LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLS-ETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALL 349
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE) HSP 1 Score: 283 bits (724), Expect = 1.920e-85 Identity = 137/291 (47.08%), Postives = 197/291 (67.70%), Query Frame = 1
Query: 538 DPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWARMEKDMMQGHRQLAATQTFEDWVLSFT-HMVAPEFCAAFVTKGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALL 1407
DPH++GL GQ V W+G DG WY+L+KDD DL INVR TAPLP++FPDRQ +T +A++S+G+S+V+EVK PY+ DT GC EDVSPC A+GGL + +DG ++ L +R S MP GG+++WARM +D+++G RQL ++ E+W+L + +M A +CA ++ + DL+ +Q++ A+ +I TPT VRL+ G+N + G+ + GR LP+L+FWQ+ VG++GL ++ LSGL GET+ V D G VMEG A G +EDYRVS A + FALL
Sbjct: 20 DPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDEL------------LRFSRQ-MP------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALL 291
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 230 bits (587), Expect = 2.070e-65 Identity = 126/302 (41.72%), Postives = 178/302 (58.94%), Query Frame = 1
Query: 529 VCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLS-QGHSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGG-IRMSSSNMPLECREFGGRKVWARMEKDM--MQGHRQLAATQTFEDWVLSFTHMVAPEFCAAFVTK---GDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAG-KTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALLH 1410
V D H+ GL GQ ++W G D WY L+ + E Q+N R TAP+P++FP RQ ++G+++ S +G SLVVEVK P + +T GCS +PCLA+G L + +DG+ L P ++ LPGG + +SS+N+P ECR FGG ++WA M G R L F DWVL M AP +CA F + LS VQS++A+LR+ T VR+ VG+N + + +D +PELDFWQ + E L E L G+LG+T+R V+D +G + G AL G +E RVS +DF +H
Sbjct: 7 VSGDSHMVGLLGQEIDWYGEDSGWYCLLVNSE--FQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGE-LGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQMH 305
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 176 bits (446), Expect = 2.470e-44 Identity = 109/310 (35.16%), Postives = 165/310 (53.23%), Query Frame = 1
Query: 532 CFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQG-----HSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWARMEKDMMQGHRQL---AATQTFEDWVLSFTHMVAPEFCAAFVT------KGDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGK--TDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVSEAEDMDFALLHN 1413
C DPH+ G GQ ++ G DG WYA+V D DL++N+R T+P+P + P+ +ITG+ + ++ HSLV+ V +P+S+D+ C S CLADG L+V LDG++ G + L G+ +S+ N+P CR FG K W R + + + R+L Q DW+L C +V + L + S+ +IVTP +RLS G ++ A + TDRF D+P+ WQM + + + L + +G+LGET + +DA GN +MEG A+ G+ EDY V D F N
Sbjct: 138 CGDPHMTGFLGQKFDFVGQDGEWYAVVSD-MPDLEVNMRVTSPVPAE-PEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDS-ACPVQGSTCLADGALTVELDGDVALLSPG---EAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRF--DIPDHLTWQMNLAFDNVDLAVDA-TGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVFVAARN 438
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI) HSP 1 Score: 176 bits (445), Expect = 2.500e-43 Identity = 98/255 (38.43%), Postives = 152/255 (59.61%), Query Frame = 1
Query: 517 CGVDVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQG-HSLVVEVKEPYSVDTPGCSEDV-----SPCLADGGLSVALDGELIEFLTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWARM--EKDMMQGHRQLAATQTFEDWVLSFTHMVAPEFCAAFVTK--GD---LSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVE 1242
C + DPHL GLRGQH +W G DG WYA + D LQ+N+R T+ LP FP+RQ +TG+A++++G H++ ++ +P + P C V +PCL +GGL + +DG E L G + G I +++ N+PLEC+ FG +W + E+ + G R L + +T DW+++ + M+AP +C ++ + GD L+ ++S A+LRI TP +R++VGIN R +T + GR +P FWQM V VE
Sbjct: 238 CTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLST-PDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDL-APTCHGTVDAVGSAPCLVNGGLRITVDGR--EQLQG-AGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTERE-QTLQDGRVVPTASFWQMDVRVE 486
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.320e-39 Identity = 105/302 (34.77%), Postives = 161/302 (53.31%), Query Frame = 1
Query: 514 PCGVDVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQG-----HSLVVEVKEPYSVDTPGCSEDVSPCLADGGLSVALDGELIEFLTGPTNDVSLPGGIRMSSSNMPLECREFGGRKVWARMEKDMMQ--GHRQLAATQTFEDWVLSFTHMVAPEFCAAFVTK-------GDLSKVQSDQALLRIVTPTAVVRLSVGINNRRAGKTDRFGRDLPELDFWQMGVGVEGLSLEHETLSGLLGETSRVVVDAEGNEVMEGAGALPGNIEDYRVS 1377
P C DPH+ G GQ ++TG DG WY L+ D + +N+R TAP+P+ PD +ITG+++++Q HS+V+ VK+P+S+++ C V+PCLA+G LSV+LDG+ E L+ P V + +++S N+P CR FG K W R + + Q G R + Q DW+L C +V + G L +S+ A +IV P A VRLS G R + ++G LP+ WQM + ++ S+ G+LGET DA+G VM G ++ G E+ ++
Sbjct: 49 PTDPTACGDPHMTGFHGQKFDFTGDDGEWYCLISD-LPSMNLNMRVTAPVPS-RPDITYITGISLITQDGNGLDHSVVITVKDPHSLES-SCPAGVTPCLANGALSVSLDGK--EALSAP-GVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG----RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVGA-QGVLGETLVPTRDADGEYVMHGMESIRGTQEECELA 337
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI) HSP 1 Score: 145 bits (365), Expect = 9.230e-37 Identity = 62/107 (57.94%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 520 GVDVCFDPHLQGLRGQHVEWTGVDGSWYALVKDDEDDLQINVRTTAPLPNDFPDRQFITGMAVLSQGHSLVVEVKEPYSVD-TPGCSEDVS-PCLADGGLSVALDGE 834
G D+C DPH++GLRGQH++W GVDG WYA +KDD+ DL +NVR TAPLP +FP+RQ +TG++V++ HSL++EV PY D GC + +S PCLA+GGLSV ++GE
Sbjct: 4 GTDICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTDINGGCLDGMSTPCLANGGLSVTVNGE 110 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig664.17650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig664.17650.1 >prot_F-serratus_M_contig664.17650.1 ID=prot_F-serratus_M_contig664.17650.1|Name=mRNA_F-serratus_M_contig664.17650.1|organism=Fucus serratus male|type=polypeptide|length=441bp MHGAISLYLFAVGAVAAFSQAGAVSSKGLRLENVEHGILGSGLAADEGQRback to top mRNA from alignment at F-serratus_M_contig664:370158..376810+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig664.17650.1 ID=mRNA_F-serratus_M_contig664.17650.1|Name=mRNA_F-serratus_M_contig664.17650.1|organism=Fucus serratus male|type=mRNA|length=6653bp|location=Sequence derived from alignment at F-serratus_M_contig664:370158..376810+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig664:370158..376810+ >mRNA_F-serratus_M_contig664.17650.1 ID=mRNA_F-serratus_M_contig664.17650.1|Name=mRNA_F-serratus_M_contig664.17650.1|organism=Fucus serratus male|type=CDS|length=2646bp|location=Sequence derived from alignment at F-serratus_M_contig664:370158..376810+ (Fucus serratus male)back to top |