mRNA_F-serratus_M_contig6635.17641.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6635.17641.1
Unique NamemRNA_F-serratus_M_contig6635.17641.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 5.140e-33
Identity = 94/221 (42.53%), Postives = 123/221 (55.66%), Query Frame = 1 
Query:  211 LFLGNFQSTVVLDMGVMKMGEAREATLRIVAPEGGRRTATTFTVDPKHPSPPGLEIG-IDGGVSLAPGQCHEARVTWRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFGNLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSFSSAPKPSQPPKIPQPPSASSSAL------NRRRKMLEYAASRRLS 852
            L LGNFQ  VVLDMG++ +GE + ATLRI  PEG R+  TT   DP+HP   GLE+   DG +SL  G+  E  V WRP R GKFRG LA +V+GRFPA+ SVVGE   +GGGG++   D       +    P G+ + RS       +  +  G GP      T    KEN  S SS   P     +   P + ++AL      N+R++ML+Y+ SRRLS
Sbjct:   26 LVLGNFQGAVVLDMGLVTVGEGKGATLRIEVPEGARKAVTTIGFDPRHPLSGGLEVADFDGELSLGRGEYREVHVAWRPERVGKFRGNLAFKVDGRFPAQVSVVGETVDVGGGGKRRKGDAREGRKRVRGGLPVGARAGRS-----LSQEAASRGAGPH-----TSMYGKENRLSLSSTALPPAASVLGPSPDSFAAALCPRTANNKRQQMLKYSKSRRLS 236
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLN9_ECTSI5.140e-3342.53Similar to asp (Abnormal spindle)-like, microcepha... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6635contigF-serratus_M_contig6635:21197..27253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score141.7
Seed ortholog evalue4.8e-31
Seed eggNOG ortholog2880.D8LLN9
Preferred nameASPM
KEGG koko:K16743,ko:K16774
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons6
Model size937
Cds size801
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932040.9715436-CDS-F-serratus_M_contig6635:21196..212471622932040.9715436-CDS-F-serratus_M_contig6635:21196..21247Fucus serratus maleCDSF-serratus_M_contig6635 21197..21247 -
1690964116.4934874-CDS-F-serratus_M_contig6635:21196..212471690964116.4934874-CDS-F-serratus_M_contig6635:21196..21247Fucus serratus maleCDSF-serratus_M_contig6635 21197..21247 -
1622932040.9964561-CDS-F-serratus_M_contig6635:21663..218431622932040.9964561-CDS-F-serratus_M_contig6635:21663..21843Fucus serratus maleCDSF-serratus_M_contig6635 21664..21843 -
1690964116.5072887-CDS-F-serratus_M_contig6635:21663..218431690964116.5072887-CDS-F-serratus_M_contig6635:21663..21843Fucus serratus maleCDSF-serratus_M_contig6635 21664..21843 -
1622932041.016341-CDS-F-serratus_M_contig6635:22485..227761622932041.016341-CDS-F-serratus_M_contig6635:22485..22776Fucus serratus maleCDSF-serratus_M_contig6635 22486..22776 -
1690964116.5188644-CDS-F-serratus_M_contig6635:22485..227761690964116.5188644-CDS-F-serratus_M_contig6635:22485..22776Fucus serratus maleCDSF-serratus_M_contig6635 22486..22776 -
1622932041.034521-CDS-F-serratus_M_contig6635:23171..233211622932041.034521-CDS-F-serratus_M_contig6635:23171..23321Fucus serratus maleCDSF-serratus_M_contig6635 23172..23321 -
1690964116.528431-CDS-F-serratus_M_contig6635:23171..233211690964116.528431-CDS-F-serratus_M_contig6635:23171..23321Fucus serratus maleCDSF-serratus_M_contig6635 23172..23321 -
1622932041.0539806-CDS-F-serratus_M_contig6635:26416..265451622932041.0539806-CDS-F-serratus_M_contig6635:26416..26545Fucus serratus maleCDSF-serratus_M_contig6635 26417..26545 -
1690964116.53753-CDS-F-serratus_M_contig6635:26416..265451690964116.53753-CDS-F-serratus_M_contig6635:26416..26545Fucus serratus maleCDSF-serratus_M_contig6635 26417..26545 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932041.0790684-UTR-F-serratus_M_contig6635:26545..265971622932041.0790684-UTR-F-serratus_M_contig6635:26545..26597Fucus serratus maleUTRF-serratus_M_contig6635 26546..26597 -
1690964116.5467906-UTR-F-serratus_M_contig6635:26545..265971690964116.5467906-UTR-F-serratus_M_contig6635:26545..26597Fucus serratus maleUTRF-serratus_M_contig6635 26546..26597 -
1622932041.0968575-UTR-F-serratus_M_contig6635:27170..272531622932041.0968575-UTR-F-serratus_M_contig6635:27170..27253Fucus serratus maleUTRF-serratus_M_contig6635 27171..27253 -
1690964116.5562253-UTR-F-serratus_M_contig6635:27170..272531690964116.5562253-UTR-F-serratus_M_contig6635:27170..27253Fucus serratus maleUTRF-serratus_M_contig6635 27171..27253 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6635.17641.1prot_F-serratus_M_contig6635.17641.1Fucus serratus malepolypeptideF-serratus_M_contig6635 21197..26545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6635.17641.1

>prot_F-serratus_M_contig6635.17641.1 ID=prot_F-serratus_M_contig6635.17641.1|Name=mRNA_F-serratus_M_contig6635.17641.1|organism=Fucus serratus male|type=polypeptide|length=267bp
MQSIIIPVPDMNPVSCPTDAESATTLFLGNFQSTVVLDMGVMKMGEAREA
TLRIVAPEGGRRTATTFTVDPKHPSPPGLEIGIDGGVSLAPGQCHEARVT
WRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFG
NLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSF
SSAPKPSQPPKIPQPPSASSSALNRRRKMLEYAASRRLSSVKHPPKDEEK
VKAPHDNVKSWAEKQAA
back to top

mRNA from alignment at F-serratus_M_contig6635:21197..27253-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6635.17641.1 ID=mRNA_F-serratus_M_contig6635.17641.1|Name=mRNA_F-serratus_M_contig6635.17641.1|organism=Fucus serratus male|type=mRNA|length=6057bp|location=Sequence derived from alignment at F-serratus_M_contig6635:21197..27253- (Fucus serratus male)
AGAACGTGTTGGTCCTCAAACAGTTGCAGATCCTGGCCAACGTTCTGTGT
TGAATCGAGAGCGCCGGAGACCTTGATCAGCAGGTGAAGCACCTCTCATT
TTTTTCTCGGTGTCACATTCTATGCGACATTTGCATCGCTGTCTGTTTCT
AGTGCAAGCCTTTACCTAGAACTAGCTACCGGAGCGTAAAACGACTGTAC
AAATTGTAGGCAGTTTCTTTCCTTAGACGAACATAACACAGACCATATCA
CCGAAAGCTGTCGATAACGCGTACCGCTCTTCTTTTTCCAGTCGTACCAC
CACCGCCTTTCTCTCCAACTCTATGAGAAAAAGTGAGCGGGAAGTGACAA
CGCCTTCTCTTTCGCGCCATGTGTTGCTGACAACAACCTTGATCACGCGC
GTCATCGTGAAGAAATATCGCGATACATATCCAAGCTATGAAATACAGTC
TATGTACCCCGGTTCTTTGTGCTGCACCTCCGTCGCCGGAAAGTGGTTAT
AGATTATAGATATGCAGTGCACACAAACAAACAAAACGTTCCCCGAGATC
GCTGATGAAATATCCTTGAAAAAGCATCGCCATCTTCTCCTCCCGACCCC
TCTTCCTCCCCGATGTGTACATCGACGTCGACACTGCTGCGCGTCATTAA
CGACAGATCGTTCCGAAGAAGCGGACATGCGATGCGTTGGAGGTAGAGAC
CATCCACGATGCAATCAATAATAATACCGGTTCCTGACATGAATCCCGTA
TCGTGTCCAACGGATGCCGAATCGGCTACGACACTTTTTCTGGGAAACTT
TCAGAGTACGGTCGTCCTTGACATGGGTGTTATGAAGGTACGTTCAACAA
TATACCCTGTTTCAATACTAACCCAAACCTTATGTTTTTACCACTACCAC
TAAGTGTTCTATAAAAATCTGAACGCATGTAGGCCTTCTGAGCATCCCAT
ACCGGGGGGGAAATGTTATCGCGATGAAATATCGTATCATAGGCGAGAAC
CGAGGAGAGATGGGAAGATCCTCAGTGACCACAGGCAGGAAGACGAGAGC
AAGAGTGACCATACAAGAGGTTCAAGCAAAAGGAAGTATGTACAAGCAAG
CCGGTCGCCCCGGTAGCTCAGTAGGTACCTCGCAGCCTTCTGACACGTTG
GGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAACTTTAA
AAAACAAAATAAAAATGCCCAACGGGTGGAAAACGATTAATTCGTTAGTA
CATAAAGTTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCCTT
CTCGCGATAAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAA
TCCTGTGTGACCTTACTCCTGTGTGACCCCGGCTGGTACGTCCAACGAAC
TTGATGTCCAGAATGGATGGGAAGAAAACACACACACACACACACACAAG
CTCGTTGCACAGACTACCACTCGATTATTTGGAGACGTGACAGAGATTCA
TTACAAAACTCGTATGTCATCTTCGATCTGCAATTCTGCAATCTGATGTA
AAGGTGTAAGAGCCTAGGGCTCTGTTTTGCAAAATCGGCTGAAGCTGAGA
AAAACAGCGAGCAAAAAACACCACCCCTGTCTGACTGCTGGGCTACCTTT
GGCTACATTTCCTTTCCCCGTGGAGTACGTGTACAATACCACGTGATGTA
AACCCGGAAGCAGATCATTGACATGGTAATATAACTTATACAGTAGTACA
GTACGAGTTTTCATGCGAGGTAGGTAGAGATGCAAATGTACAGCTTGGTG
CTGTCCTGTAGGTAAGTACAGTATTCATATACGGAGTATACTGTGGTATG
TATAGTCATCACATATAGCAGAGCATGCAGTATCCATACTCTTTACTCGT
CTGGTCTGTATAATCTGTCATCAATACGTACAGTAGTACCGTATGTATGT
ATGTATGTATGTATGTATGTATGTATTCATGCAATTATGTATGTTCATCA
CATATAGCAGAGTATGGATCAACCGTGTAAGGTTGCCAACCCTGCTCGTG
GTCAGCTGAACAGGAAAAATCAATATTTTCCTGCTCCCGTGCGTGCCTGA
GAATTTGGTCTCGCGGGACGGGTTCAGCCGTCCCGTCCAGCGTCAGCCTG
CTCATCTCCATACTCAGGCTGAATTTGGTGCTTACTTACGGGATTCCTCC
CGAGTTCTGTACTCAACAAGTAGTTGTATCAAAACCCAGAGATCAAAATC
TTCATTCCCCTAGTTTATACCAGTATGTATCTAAAGCACAAAGCACGACG
GTCGTTGAGATTAGAAATGTAATATTATTATGTACCAGGTAGTACAGTAC
GAAGAAGACCTCTTCAAGGAGTTGAATTCCTCGATCCCGTGTGAAAACAC
CAGGTTCGGCCCGGCAGGTGGAGAAAGAGCGGGCTGTCGCGGGACAGGAC
GGCTGTGTCTGTCTCGCGAGACCAAAGTCTCTGACGCGGACGCGGCTAGG
AAAAAAGAAGTCTCCCCGTTCAGCTAACCAAAAGCAGGATGGTGCTCAAT
ACGCTAAGCATGATGAATGGCAAAAGCGAACCAATCCGCAGCCTTGTCTC
CCAATGTGTACAGTAGACAGTAGAGGAGAGAAGCACCACAGAGTTTCCGA
TAAAATATTAGTAGAAATTCGACAGGGGATACTTGTTTCCATCCCCTGTC
AAGATGAGCACATTACTTGCTGTACATACAGTACCATCACTGAACTTCCC
TGGCTCAATGTCTGCCTTATTGACATTTATCTCAGTGGTTTCACGGTAAG
CTTAGTAGAAGCCAACCCAGGAGGCTCGATAGCCCCCGATGTCAGCCCAA
GGCTACCTACCGCCTTTGAAACAGCGCTCTTATCCGGTTCGGTCAAATTG
TCAAATTGTTGTGGGGTTTTATGTTTTATCTCTCCTGCGACCCATTGTCG
AATTAGTTGTCCACACAGAGTTAGTATCGCCGTCGCACCATCTCTCCTCT
CTCGGCTAAGGTTTAAGATTTATAGTACTTGTTATCCATTCAAATCTCTT
CTCCTGACAAGAAAAAAAGGGTCGCGCACTGGAAATCGAACCCGGGTCTG
AAGCTTGTCTCGAGAGAACCACATTTATGTACGGTACCCGTACTCCGTCA
GCTCTTAGCTCAGTGGCGTAATTATAAACGTGGTATCCCCGAGGGTAGAC
TGTCAGACAGACAGCGCCGCTTCACAGAGCTATTATTGATAATACCCGTA
CTTTCGTACTCTCGTTCTGCGTGATGTGATTGGCCCACTTACGCTGTACT
ATCCGTCTCTACAGCACACTCTGTACTCTGTTCTGGTATGATTCACACGT
TCAAAACGAGTACGAGATGTCAGAAGTGCAAAACAACATTTTTCAACATT
TTAACTCAATCTGGGCATATAGTCTACCTGTGCACACTTTTTTTTCAATC
GAGGACAACAAGTACAGCGTCTCTAGTGACTAGTGACATTAATGCATTTT
TTCAGGTTCATGGTGTGCTTTTTGTTTCGGTTGTGGTGTACCTGCATGTT
ATATACTATATACTATATACTATCTACTATATAGCGATTCATGTAAGCGT
ACAGTTTAACGGTGGGCTTCTCCCCGATATCATCTTGTTGATCCGCTATG
ACCATTGGGAAATATAACATTGACCGATCAAATCCCATGAAGAGTCTTTG
TCCTTGTACTCAATGTTCCCACCTAAATGTTTTGACCATTTTTCCCCCTG
GCTGGGCGGATGCTCAGAAGGGTTAGATGCGTTCAGATTTTTATATGAAC
TAGAAATAGTTATAGTCCTCTCAGGGGTGTAAGGAGACGATTGGTCTACA
CCATTATAATAGACCAATGAAAAACCGATATTGTCGAGACGATCACGACC
CGCGCCCCTTTGTTTGACCCGTCGGGAAGCAGATGGGCGAGGCCCGGGAA
GCGACGTTGCGAATCGTGGCTCCGGAAGGAGGCAGGCGGACAGCAACGAC
GTTTACCGTTGACCCCAAACACCCCTCGCCTCCGGGTCTAGAAATCGGCA
TCGACGGTGGCGTCTCGCTAGCGCCGGGACAGGTATGACACTGGAATATT
ACTGCCGCGCGACATGTGGCCAAAATAGAGGGCTGACTCGCCTGGCACAT
CATCTTGTTTCGATCAAGGGGATTTCTCTGATCGTTATCATACAGAATCA
TGGTTCTTTCAAGCATACTTAGTATCCACACTCAGAGGTTTTCGTAATAA
GTATCATTGATCCCCTCTTGGGAGGATCAATGCGAGTGGCATAGAATGAC
TAGGATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATACGC
ACACACACACACGCACACGCACACGCACACACTTTTTGACCTCCCGTTCG
ACTATATCGACTATCGTGCGCTTACTCCGCGTGGGGCGATAACACAAACA
CACAAACACTGGTCGCGGCAACAACAGTGTCACGAGGCGCGTGTGACGTG
GCGGCCAAACCGCCCCGGGAAATTTCGCGGAACCCTTGCCCTCCGTGTCA
ACGGTCGCTTTCCTGCGCGAGCGTCGGTCGTGGGAGAGGCCTTCCCACTT
GGCGGCGGCGGAGAAAAAGCGAATCGGGACGATGGTCGTGCTTTCGGGAA
CCTGGCCAAGAAGCGACCAGGCGGCAGCAGCAGCAGCAGGAGTGGAGGCG
GTATAGTCCCCGGAAGGCGTGTGTCTTTGGGTGGGAAGGGGCCGCGAGGC
TTGGCGCACTCCACACCGGTGAGTGGAGCTCTGTTGTGTGTTCTTCGTAA
TGCTCTCCAGGCCTTCTCTCGGGTGGGCTTTGATGGTGGCAAGAGAAAAG
AGCGCAAGTTATTTCATTGATAGTGCAAAATATGGTGTCCTCAAGCGTAG
AGTGCGAGCACACAGCGGCGCTGCAGGTTGTTCGTGCTTCTCACGCAGGT
TCCCGTTGTAGTGCCATTTAAAGTGCGGCACTTGACGGGCGCTACAGAGC
AGATGACGGCGGTAAAGCTTTGTAGAGGGTAGGGGTTGTTTTGTGGGTCA
GCCACAAGCTCAACGCCTTTCCGCAGCGTGTAGCATGAAGTTGTTGGTTT
TTACCTCTTGGAGACCTCTATCAATACTCTATTAATATGTTAATAGATTC
GGGACGCCAGCGGGCGTTATGGGGATACGTCCCCGCCTCGCGACGAACCT
TGCATCGTGGACGGCTAGGTCAAGATTGCCTTTTAACTAAAACCTTGATC
CACGTCCAAACGCCCGACGCGTAGCGAACCTCGCATCGTGGACGGCGAGG
TCAAAGTTGTTTAACTAAACCTCGATCCACGTCCGAACGCCCGACGCGTA
CCGTTTCTCCCATATCCTTTCTCGTGTTGTCTGTCTCCTTATCCACGTGG
TGTGTGGTAGGCAAGTGACAAGGAAAACTGTCCAAGCTTCAGCTCGGCGC
CAAAACCTTCGCAGCCCCCAAAAATTCCGCAGCCGCCCTCCGCGTCGTCG
AGCGCACTGAACAGGCGGCGAAAAATGCTAGAGTACGCAGCCTCCAGGAG
GCTATCCTCGGTCAAGCATCCCCCCAAGGACGAGGAAAAGGTTAAAGCCC
TCATCCGCCTCTAGCCATGCTTTCTTTTTTTCTTTCTTTCTTTCTTCCTT
TCTTTCTTTCTTTCTTTTGTTTTATTTTTTCGTTGCTTTATTTTGTGAAA
AACGCGTAGCGTGCTTTTCGAAGGCTTATCGCGGATCGCGGTGTCCGGTG
CGCGCACGCTTTGGAATTGGTCTTTCCCCCCTCCCCCCCCCCCCATGCGC
CCCCGTCCGCAGAATGAAGAATTTCATTGTTGCCTCGTTGCCTCGAGTCG
CTAGGTAAAAGTTTTTGACGTTGCCTTCTTTCTTGATTGGTTCTGTGCGT
AGCTCTTTCCACGTGCGAGCATAAGCACAGACACAATTCAGTGTCTGGTA
GCTCTGGTCCTTACCTACTCGCTCGCTCGCATGCGTGTCGCCGTATTTCC
CCACAGGTAAAGGCCCCGCACGACAATGTCAAGAGCTGGGCCGAAAAGCA
GGCGGCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig6635:21197..27253-

>mRNA_F-serratus_M_contig6635.17641.1 ID=mRNA_F-serratus_M_contig6635.17641.1|Name=mRNA_F-serratus_M_contig6635.17641.1|organism=Fucus serratus male|type=CDS|length=1602bp|location=Sequence derived from alignment at F-serratus_M_contig6635:21197..27253- (Fucus serratus male)
ATGCAATCAATAATAATACCGGTTCCTGACATGAATCCCGTATCGTGTCC
AACGGATGCCGAATCGGCTACGACACTTTTTCTGGGAAACTTTCAGAGTA
CGGTCGTCCTTGACATGGGTGTTATGAAGATGCAATCAATAATAATACCG
GTTCCTGACATGAATCCCGTATCGTGTCCAACGGATGCCGAATCGGCTAC
GACACTTTTTCTGGGAAACTTTCAGAGTACGGTCGTCCTTGACATGGGTG
TTATGAAGATGGGCGAGGCCCGGGAAGCGACGTTGCGAATCGTGGCTCCG
GAAGGAGGCAGGCGGACAGCAACGACGTTTACCGTTGACCCCAAACACCC
CTCGCCTCCGGGTCTAGAAATCGGCATCGACGGTGGCGTCTCGCTAGCGC
CGGGACAGATGGGCGAGGCCCGGGAAGCGACGTTGCGAATCGTGGCTCCG
GAAGGAGGCAGGCGGACAGCAACGACGTTTACCGTTGACCCCAAACACCC
CTCGCCTCCGGGTCTAGAAATCGGCATCGACGGTGGCGTCTCGCTAGCGC
CGGGACAGTGTCACGAGGCGCGTGTGACGTGGCGGCCAAACCGCCCCGGG
AAATTTCGCGGAACCCTTGCCCTCCGTGTCAACGGTCGCTTTCCTGCGCG
AGCGTCGGTCGTGGGAGAGGCCTTCCCACTTGGCGGCGGCGGAGAAAAAG
CGAATCGGGACGATGGTCGTGCTTTCGGGAACCTGGCCAAGAAGCGACCA
GGCGGCAGCAGCAGCAGCAGGAGTGGAGGCGGTATAGTCCCCGGAAGGCG
TGTGTCTTTGGGTGGGAAGGGGCCGCGAGGCTTGGCGCACTCCACACCGT
GTCACGAGGCGCGTGTGACGTGGCGGCCAAACCGCCCCGGGAAATTTCGC
GGAACCCTTGCCCTCCGTGTCAACGGTCGCTTTCCTGCGCGAGCGTCGGT
CGTGGGAGAGGCCTTCCCACTTGGCGGCGGCGGAGAAAAAGCGAATCGGG
ACGATGGTCGTGCTTTCGGGAACCTGGCCAAGAAGCGACCAGGCGGCAGC
AGCAGCAGCAGGAGTGGAGGCGGTATAGTCCCCGGAAGGCGTGTGTCTTT
GGGTGGGAAGGGGCCGCGAGGCTTGGCGCACTCCACACCGGCAAGTGACA
AGGAAAACTGTCCAAGCTTCAGCTCGGCGCCAAAACCTTCGCAGCCCCCA
AAAATTCCGCAGCCGCCCTCCGCGTCGTCGAGCGCACTGAACAGGCGGCG
AAAAATGCTAGAGTACGCAGCCTCCAGGAGGCTATCCTCGGTCAAGCATC
CCCCCAAGGACGAGGAAAAGGCAAGTGACAAGGAAAACTGTCCAAGCTTC
AGCTCGGCGCCAAAACCTTCGCAGCCCCCAAAAATTCCGCAGCCGCCCTC
CGCGTCGTCGAGCGCACTGAACAGGCGGCGAAAAATGCTAGAGTACGCAG
CCTCCAGGAGGCTATCCTCGGTCAAGCATCCCCCCAAGGACGAGGAAAAG
GTAAAGGCCCCGCACGACAATGTCAAGAGCTGGGCCGAAAAGCAGGCGGC
GGTAAAGGCCCCGCACGACAATGTCAAGAGCTGGGCCGAAAAGCAGGCGG
CG
back to top