mRNA_F-serratus_M_contig663.17633.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 4.350e-17 Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 3
Query: 297 MNPSKMLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
MN +++ QWL LSEYV NVD ++L AGLW GDLVLRDLQVR DVSRKL LP+VL+QG V+ +R++
Sbjct: 1 MNLFRVIPQWLAGKLSEYVHNVDFDSLGAGLWSGDLVLRDLQVRTDVSRKLHLPVVLKQGSVDLVRIQ 68
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A835Z9T2_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.410e-12 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 3
Query: 297 MNPSKMLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
MN SK LA L L EYV NVD ++LQ GLW GDL L++L++R D RK LP+VL G V +RL+
Sbjct: 1 MNLSKKLANVLARTLGEYVQNVDEDSLQVGLWAGDLQLKNLELRPDALRKAELPVVLRSGSVGTVRLK 68
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: S9W3H8_SCHCR (Vacuolar protein sorting-associated protein 13b n=1 Tax=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) TaxID=653667 RepID=S9W3H8_SCHCR) HSP 1 Score: 62.0 bits (149), Expect = 2.620e-7 Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 3
Query: 312 MLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
+LA +L L EY++N D L+ G+W GD+ L +LQ++ D +KL LPI ++ G +E L+L+
Sbjct: 5 LLANFLNRLLGEYIENFDATQLKVGVWNGDVTLHNLQLKRDALKKLELPISVQYGLIESLKLK 67
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: S9PZN0_SCHOY (Vacuolar protein sorting-associated protein 13b n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9PZN0_SCHOY) HSP 1 Score: 61.6 bits (148), Expect = 3.530e-7 Identity = 26/63 (41.27%), Postives = 43/63 (68.25%), Query Frame = 3
Query: 312 MLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
+LA +L L EY++N D L+ G+W GD+ L++LQ++ D +KL LPI ++ G +E L+L+
Sbjct: 5 LLANFLNRLLGEYIENFDATQLKVGVWNGDVTLQNLQLKRDALKKLELPISVQYGLLESLKLK 67
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A397YUB0_BRACM (Chorein N-terminal domain-containing protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397YUB0_BRACM) HSP 1 Score: 54.3 bits (129), Expect = 2.430e-6 Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 3
Query: 336 YLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
YL EYV + T AL+ +W+GD+VL+DL+++A+ L+LP+ ++ G V + L+
Sbjct: 13 YLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTITLK 67
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A2T9YPT1_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YPT1_9FUNG) HSP 1 Score: 57.4 bits (137), Expect = 9.250e-6 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 3
Query: 312 MLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRL 497
++A L L YVDN++TN L+ G+WRGD+ L++LQ+R D L LPI + +G ++ L L
Sbjct: 5 VVANLLNKLLGGYVDNLETNQLRIGIWRGDVALKNLQLRKDALDGLHLPIDISKGEIKNLTL 66
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A371ELH0_MUCPR (Putative vacuolar protein sorting-associated protein 13F (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371ELH0_MUCPR) HSP 1 Score: 53.1 bits (126), Expect = 1.470e-5 Identity = 21/55 (38.18%), Postives = 38/55 (69.09%), Query Frame = 3
Query: 336 YLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
YL EYV + T AL+ +W+GD++L+DL+++A+ L+LP+ ++ G V + L+
Sbjct: 13 YLGEYVHGLSTEALRISVWKGDVILKDLKLKAEALNALKLPVTVKAGFVGTITLK 67
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A565AMZ3_9BRAS (C2 domain-containing protein (Fragment) n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AMZ3_9BRAS) HSP 1 Score: 56.6 bits (135), Expect = 1.640e-5 Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 3
Query: 279 LLSIFKMNPSKMLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
L S F++ + + L YL EYV + T AL+ +W+GD+VL+DL+++A+ L+LP+ ++ G V + L+
Sbjct: 62 LRSCFRLFNVESVLHLLKRYLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTITLK 135
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A7I8IPD5_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IPD5_SPIIN) HSP 1 Score: 52.4 bits (124), Expect = 1.790e-5 Identity = 21/58 (36.21%), Postives = 37/58 (63.79%), Query Frame = 3
Query: 327 LGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
L YL EYV + T L+ +W+GD+VL+DL ++A+ L+LP+++ G + + L+
Sbjct: 10 LRKYLGEYVHGLSTELLRISVWKGDVVLKDLNLKAEALNSLKLPVIVRAGFIGSITLK 67
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Match: A0A0K9PF13_ZOSMR (Chorein N-terminal domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PF13_ZOSMR) HSP 1 Score: 52.0 bits (123), Expect = 1.960e-5 Identity = 21/58 (36.21%), Postives = 38/58 (65.52%), Query Frame = 3
Query: 327 LGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKLRLPIVLEQGCVEFLRLE 500
L YL +YV + AL+ +W+GD+VL+DL+++A+ L+LP+++ G V + L+
Sbjct: 10 LRKYLGDYVHGLSNEALRISVWKGDVVLKDLKLKAEALNSLKLPVIVNAGFVGTITLK 67 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig663.17633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig663.17633.1 >prot_F-serratus_M_contig663.17633.1 ID=prot_F-serratus_M_contig663.17633.1|Name=mRNA_F-serratus_M_contig663.17633.1|organism=Fucus serratus male|type=polypeptide|length=81bp MNPSKMLAQWLGDYLSEYVDNVDTNALQAGLWRGDLVLRDLQVRADVSRKback to top mRNA from alignment at F-serratus_M_contig663:203106..208604- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig663.17633.1 ID=mRNA_F-serratus_M_contig663.17633.1|Name=mRNA_F-serratus_M_contig663.17633.1|organism=Fucus serratus male|type=mRNA|length=5499bp|location=Sequence derived from alignment at F-serratus_M_contig663:203106..208604- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig663:203106..208604- >mRNA_F-serratus_M_contig663.17633.1 ID=mRNA_F-serratus_M_contig663.17633.1|Name=mRNA_F-serratus_M_contig663.17633.1|organism=Fucus serratus male|type=CDS|length=486bp|location=Sequence derived from alignment at F-serratus_M_contig663:203106..208604- (Fucus serratus male)back to top |