mRNA_F-serratus_M_contig662.17617.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig662.17617.1
Unique NamemRNA_F-serratus_M_contig662.17617.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: D7G402_ECTSI (Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G402_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.850e-92
Identity = 148/178 (83.15%), Postives = 167/178 (93.82%), Query Frame = 2 
Query:    2 ELLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIKRMGN 535
            ELLPQVKA+LILDEDGGRV+CKYHD+KEFPNLGAEAMFEHKLFRKTK+V+A +EADVVL+D+VVAVFR GLDVH+YVVGS +ENELILTAVLDALHETL ILLRGQIDRR+LL+NLALVLL++DEL+DAGKILEIDPSAIANRVLMRGADAR P +S++   QAIA+ REE IKRMGN
Sbjct:    4 ELLPQVKAVLILDEDGGRVSCKYHDRKEFPNLGAEAMFEHKLFRKTKSVHAPTEADVVLLDDVVAVFRSGLDVHLYVVGSTDENELILTAVLDALHETLLILLRGQIDRRTLLDNLALVLLSIDELVDAGKILEIDPSAIANRVLMRGADARGPQSSDVNFPQAIASVREEFIKRMGN 181
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A836C7T9_9STRA (Coatomer subunit zeta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T9_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.630e-72
Identity = 120/177 (67.80%), Postives = 149/177 (84.18%), Query Frame = 2 
Query:    5 LLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIKRMGN 535
            LLP VK +LILD+DGGRV+ KY+DK  F     +  FE KL++KTKN+NARSEADVVL+++ VAVFR G+D+H+YVVGSA+ENELILT VLDAL+++L  LLRGQ+D+R+LL+NLALVLLA+DEL D GKILE+DPSAI NRVLM+GA    P  +ELT+QQAIATA+EE I+RMGN
Sbjct:    5 LLPLVKCVLILDDDGGRVSTKYYDKDSFGTHSVQTDFEDKLWKKTKNINARSEADVVLLEDCVAVFRSGVDIHVYVVGSADENELILTLVLDALYDSLNALLRGQLDKRTLLDNLALVLLAVDELCDGGKILEVDPSAITNRVLMKGATGGPPPMTELTIQQAIATAKEEFIRRMGN 181
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A7S2DB18_9STRA (Coatomer subunit zeta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DB18_9STRA)

HSP 1 Score: 204 bits (520), Expect = 9.490e-60
Identity = 104/177 (58.76%), Postives = 135/177 (76.27%), Query Frame = 2 
Query:    5 LLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIKRMGN 535
            ++P VKAILILD DG R+  KY+DK+EFPN   +  FE KL+RKTK  NAR+EA++++ ++ VAV+R   D    VVGS EENELILT VLD LHE L +LLRGQ DRRSLL++L LV+L +DE++D G ILE++P +IA+R LMRG D  Q   +ELT+ QA+A+ARE+LIK MGN
Sbjct:   19 IVPLVKAILILDGDGNRLAAKYYDKQEFPNDAEQTAFEQKLYRKTKQTNARTEAEIIMFEKNVAVYRSSNDTRFLVVGSNEENELILTGVLDGLHEALNVLLRGQTDRRSLLDSLELVILCIDEVVDGGMILEMEPQSIASRALMRGVDGGQVPITELTIGQALASAREQLIKSMGN 195
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A7S2V887_9STRA (Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V887_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.020e-54
Identity = 102/186 (54.84%), Postives = 143/186 (76.88%), Query Frame = 2 
Query:    5 LLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMR----GADARQPLAS-----ELTVQQAIATAREELIKRMGN 535
            LLP VK I++LD++G RV+ KY++K EF ++ ++  FE KL +K K  +AR++AD++++D+ + VFRGG DV+  V+GS++ENELILTAVLDAL+++L +LLR Q+DRR+LLENLALVLLA+DE+ID G +LE D +AIANRVLM+    GA +    AS     ELT+  A+ TA++ELIKRM N
Sbjct:    5 LLPTVKGIVVLDDEGCRVSAKYYNKTEFLSISSQIEFEAKLSKKIKGTSARNDADIIILDKNIVVFRGGADVNFCVIGSSDENELILTAVLDALYDSLSLLLRSQLDRRTLLENLALVLLAVDEVIDGGLLLETDATAIANRVLMKDAAGGAQSATGAASSVPFTELTITSALQTAKDELIKRMAN 190
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A6T5Q8Y8_HETAK (Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8Y8_HETAK)

HSP 1 Score: 176 bits (446), Expect = 7.120e-49
Identity = 97/192 (50.52%), Postives = 127/192 (66.15%), Query Frame = 2 
Query:    8 LPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLA------------------SELTVQQAIATAREELIKRM 529
            +P VK ILIL EDG RV+ KY DK  +P+  A+  FE KL RK K   A++EADV+++D  + VFR G+D++  + GSA+ENELIL  VLD  ++ L  LLRGQ+DRR++L+N+ALVLLA DEL+DAG ILE D   IA RVLMRGA+ + P                    +ELT+  A+ TA+ ELIKRM
Sbjct:    5 MPMVKGILILGEDGSRVSAKYFDKTTYPDHAAQTDFEQKLSRKIKGTTAKNEADVIILDNTIIVFRAGIDLNFCIFGSAQENELILANVLDGFYDALNQLLRGQLDRRTVLDNMALVLLAQDELVDAGLILETDARDIAARVLMRGAEGQGPPGXXXXXXXXXXXXXXPTSFAELTLSSALQTAKSELIKRM 196
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: F0YL15_AURAN (Coatomer subunit zeta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL15_AURAN)

HSP 1 Score: 174 bits (442), Expect = 2.830e-48
Identity = 94/175 (53.71%), Postives = 128/175 (73.14%), Query Frame = 2 
Query:    5 LLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAE-AMFEHKLFRKTKNVN-ARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIK 523
            L+P V A+L+LD +G R+  KY+    F   G E + FE KLF+KTKN N ARS+ADV+++D  +A+FR G D   YV+GSAEENE+IL  VLD L E L  LLRGQ++ R+LLENL  V+LA+DEL+D G ILE DP +I +RVLMRG +  QP+ +++++ QAIATA+++L K
Sbjct:   10 LVPSVLAVLLLDSEGNRIIAKYYQG--FLGTGLEKSKFEAKLFKKTKNTNTARSDADVIMLDNTIAIFRCGADTRFYVLGSAEENEIILNLVLDGLFEALNTLLRGQLESRALLENLETVMLAVDELVDGGMILETDPQSITSRVLMRGVEGTQPI-TDMSMSQAIATAKDQLFK 181
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A7S3JT64_9STRA (Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT64_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.250e-46
Identity = 89/177 (50.28%), Postives = 125/177 (70.62%), Query Frame = 2 
Query:    5 LLPQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIKRMGN 535
            L P V ++LILD +G R+  KY+      +L  +  FE KLF+KTKN   RS+AD++++D  + ++R   D  +YVVGS +ENE+IL  VLDAL+  L  LLRGQ+D RS+L+NL L +L++DEL+D G ILEIDP  I NRVLMR  DA  P+ ++++V QA+ATA+++L K MGN
Sbjct:   17 LTPVVLSVLILDGEGRRIIAKYNKGFCQNSLEIQQKFEQKLFKKTKNSPVRSDADIIMLDNTICIYRAAGDAKVYVVGSMDENEIILNMVLDALYTALSTLLRGQMDARSILDNLELTMLSVDELVDGGIILEIDPQNIVNRVLMRPDDAIHPI-TDMSVSQALATAKDQLFKSMGN 192
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: A0A8K1FCZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCZ5_PYTOL)

HSP 1 Score: 169 bits (427), Expect = 2.380e-46
Identity = 90/171 (52.63%), Postives = 122/171 (71.35%), Query Frame = 2 
Query:   11 PQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIK 523
            P VKAI +LD DG RV  KY+DK  +P    +   E K+  KTKN+NAR EAD+VL++ +V+VFR G DV ++VV SA ENE+IL  VLDA  E +  LL+G++DR  +L+N+ LVLL +DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+  +
Sbjct:    7 PLVKAIFVLDTDGNRVCAKYYDK-TYPTSKEQLALEKKVHLKTKNINARLEADIVLLENIVSVFRSGSDVTMHVVSSASENEIILLNVLDATFEAVSGLLKGRVDRHVMLDNIELVLLTLDEVVDGGMILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQFSR 175
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BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: D0MQV3_PHYIT (Coatomer subunit zeta n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MQV3_PHYIT)

HSP 1 Score: 168 bits (425), Expect = 4.660e-46
Identity = 91/171 (53.22%), Postives = 121/171 (70.76%), Query Frame = 2 
Query:   11 PQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIK 523
            P VKAI ILD DG RV  KY+DK  +P    +   E KL+ KTKN NAR EAD+VL++ +V+VFR G D  ++VVGSA ENELIL  VLD+  + +  LL+G++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+A ELT+ QA A+ARE+  +
Sbjct:    7 PSVKAIFILDSDGNRVCAKYYDK-SYPTQKEQLALEKKLYAKTKNSNARLEADIVLIENIVSVFRCGSDTTMHVVGSASENELILLTVLDSAFDAVSNLLKGRMDRHVMLDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPMA-ELTISQAFASAREQFSR 175
[Close]
BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Match: K3WGV8_GLOUD (Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGV8_GLOUD)

HSP 1 Score: 167 bits (424), Expect = 6.520e-46
Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 2 
Query:   11 PQVKAILILDEDGGRVTCKYHDKKEFPNLGAEAMFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENELILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEIDPSAIANRVLMRGADARQPLASELTVQQAIATAREELIK 523
            P VKAI ILD DG RV  KY+DK  +P    +   E KL+ KTKN N R EA+++L+D +V+V+R G DV ++V+GSA ENE+IL +VLDA  E    LL+G++DR  +L+N+ LVLL  DE++D G ILE+D  +I+NRVLMRG D   P+ SELT+ QA A+ARE+  +
Sbjct:    7 PTVKAIFILDSDGNRVCAKYYDK-SYPTAKDQLALEKKLYLKTKNSNPRLEAEIILIDNIVSVYRSGSDVTMHVIGSASENEVILLSVLDATFEAASSLLKGRMDRHVILDNIELVLLTFDEVVDGGIILEVDTPSISNRVLMRGIDNEVPI-SELTISQAFASAREQFSR 175
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig662.17617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G402_ECTSI1.850e-9283.15Coatomer subunit zeta n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836C7T9_9STRA1.630e-7267.80Coatomer subunit zeta n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2DB18_9STRA9.490e-6058.76Coatomer subunit zeta n=1 Tax=Dictyocha speculum T... [more]
A0A7S2V887_9STRA2.020e-5454.84Coatomer subunit zeta n=1 Tax=Fibrocapsa japonica ... [more]
A0A6T5Q8Y8_HETAK7.120e-4950.52Coatomer subunit zeta n=1 Tax=Heterosigma akashiwo... [more]
F0YL15_AURAN2.830e-4853.71Coatomer subunit zeta n=1 Tax=Aureococcus anophage... [more]
A0A7S3JT64_9STRA2.250e-4650.28Coatomer subunit zeta n=1 Tax=Aureoumbra lagunensi... [more]
A0A8K1FCZ5_PYTOL2.380e-4652.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MQV3_PHYIT4.660e-4653.22Coatomer subunit zeta n=18 Tax=Peronosporaceae Tax... [more]
K3WGV8_GLOUD6.520e-4652.05Coatomer subunit zeta n=2 Tax=Pythiaceae TaxID=478... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig662contigF-serratus_M_contig662:298322..301590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.6
Seed ortholog evalue3.7e-54
Seed eggNOG ortholog2880.D7G402
Preferred nameCOPZ1
KEGG koko:K20472
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005801,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008104,GO:0008150,GO:0009790,GO:0009792,GO:0009987,GO:0009994,GO:0010883,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030120,GO:0030126,GO:0030133,GO:0030135,GO:0030137,GO:0030154,GO:0030659,GO:0030660,GO:0030662,GO:0030663,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0046907,GO:0048193,GO:0048468,GO:0048475,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:1901998,GO:1905952
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG5541@1,KOG3343@2759
Ec32 ortholog descriptionCoatomer protein complex, zeta sub-unit
Ec32 orthologEc-19_000620.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons5
Model size1521
Cds size429
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932034.2435858-UTR-F-serratus_M_contig662:298321..2984301622932034.2435858-UTR-F-serratus_M_contig662:298321..298430Fucus serratus maleUTRF-serratus_M_contig662 298322..298430 +
1690964112.8268776-UTR-F-serratus_M_contig662:298321..2984301690964112.8268776-UTR-F-serratus_M_contig662:298321..298430Fucus serratus maleUTRF-serratus_M_contig662 298322..298430 +
1622932034.3429344-UTR-F-serratus_M_contig662:300607..3015901622932034.3429344-UTR-F-serratus_M_contig662:300607..301590Fucus serratus maleUTRF-serratus_M_contig662 300608..301590 +
1690964112.922723-UTR-F-serratus_M_contig662:300607..3015901690964112.922723-UTR-F-serratus_M_contig662:300607..301590Fucus serratus maleUTRF-serratus_M_contig662 300608..301590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932034.2586613-CDS-F-serratus_M_contig662:298430..2984661622932034.2586613-CDS-F-serratus_M_contig662:298430..298466Fucus serratus maleCDSF-serratus_M_contig662 298431..298466 +
1690964112.8481312-CDS-F-serratus_M_contig662:298430..2984661690964112.8481312-CDS-F-serratus_M_contig662:298430..298466Fucus serratus maleCDSF-serratus_M_contig662 298431..298466 +
1622932034.2757642-CDS-F-serratus_M_contig662:298903..2989901622932034.2757642-CDS-F-serratus_M_contig662:298903..298990Fucus serratus maleCDSF-serratus_M_contig662 298904..298990 +
1690964112.8688095-CDS-F-serratus_M_contig662:298903..2989901690964112.8688095-CDS-F-serratus_M_contig662:298903..298990Fucus serratus maleCDSF-serratus_M_contig662 298904..298990 +
1622932034.2950912-CDS-F-serratus_M_contig662:299514..2996011622932034.2950912-CDS-F-serratus_M_contig662:299514..299601Fucus serratus maleCDSF-serratus_M_contig662 299515..299601 +
1690964112.8863068-CDS-F-serratus_M_contig662:299514..2996011690964112.8863068-CDS-F-serratus_M_contig662:299514..299601Fucus serratus maleCDSF-serratus_M_contig662 299515..299601 +
1622932034.3111181-CDS-F-serratus_M_contig662:300089..3002601622932034.3111181-CDS-F-serratus_M_contig662:300089..300260Fucus serratus maleCDSF-serratus_M_contig662 300090..300260 +
1690964112.8985448-CDS-F-serratus_M_contig662:300089..3002601690964112.8985448-CDS-F-serratus_M_contig662:300089..300260Fucus serratus maleCDSF-serratus_M_contig662 300090..300260 +
1622932034.3266585-CDS-F-serratus_M_contig662:300559..3006071622932034.3266585-CDS-F-serratus_M_contig662:300559..300607Fucus serratus maleCDSF-serratus_M_contig662 300560..300607 +
1690964112.9115255-CDS-F-serratus_M_contig662:300559..3006071690964112.9115255-CDS-F-serratus_M_contig662:300559..300607Fucus serratus maleCDSF-serratus_M_contig662 300560..300607 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig662.17617.1prot_F-serratus_M_contig662.17617.1Fucus serratus malepolypeptideF-serratus_M_contig662 298431..300607 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig662.17617.1

>prot_F-serratus_M_contig662.17617.1 ID=prot_F-serratus_M_contig662.17617.1|Name=mRNA_F-serratus_M_contig662.17617.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MFEHKLFRKTKNVNARSEADVVLMDEVVAVFRGGLDVHIYVVGSAEENEL
ILTAVLDALHETLGILLRGQIDRRSLLENLALVLLAMDELIDAGKILEID
PSAIANRVLMRGADARQPLASELTVQQAIATAREELIKRMGN*
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mRNA from alignment at F-serratus_M_contig662:298322..301590+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig662.17617.1 ID=mRNA_F-serratus_M_contig662.17617.1|Name=mRNA_F-serratus_M_contig662.17617.1|organism=Fucus serratus male|type=mRNA|length=3269bp|location=Sequence derived from alignment at F-serratus_M_contig662:298322..301590+ (Fucus serratus male)
GGAACTTCTCCCCCAAGTGAAGGCCATCCTCATTCTTGATGAAGACGGCG
GGCGAGTGACTTGCAAGTACCACGACAAGAAGGAGTTCCCCAACCTCGGG
GCGGAGGCCATGTTCGAGCACAAACTTTTCAGGAAGACCAAGAATGTGAG
TTTCGGGGATGGCTTGTCTTTCTTTTCCTGCGGTCGTGGTTCGTGCGTAG
CGTCCACCACCCCAGAATCGTTGGCCCGGCCGTTGACATTGTATAGGTGG
GACGGAACAACCGATTCCAGCCCACAACTCTTACGACATGTAGTCGACGG
TCAGAAATAGAAAGGGCCAACGATCATCTCTACAATGGCCCCGTGAGAAC
TTTCTCGTCGCATGTCGCTTTAGGATGAACTCTCCCTGTGTCCCCCCACC
CCGCCCCCATCGCTAATATTTTGTACAGCATACTATAGCACATTTGAGAA
CCTGTGAACCAGTAGATCAGTATGGACGTAACATCCGAACCGCCGCATAC
TCCCCGCCCCTGTTAATAGTACGCTGTACCTTGCGATATTCTCCGCATAC
TGCATACCGCATGCTGTTGCATGCGGCTAAAGGTTAACGCTCGGTCGGAG
GCGGACGTGGTGCTGATGGACGAAGTCGTTGCGGTATTTAGGGGCGGGCT
GGATGTGCACATCTACGTGGTGAGTTTTGTGTCTTGCAACACTTACACAT
GCCATCAGGTACAGTATGCTGCACTACAGTAGTCATTACAGAGTAAGTGG
GCAAACGTGAGGTACCTGGTACAACAGAGTACGTTTGAAGAGTTCGAGTG
GTTTGACAATATCTTTCGTTTTAGGTGGATGAAACAGAAAAGTCCAGGGT
CAAGAAAGAGGTTTTGCTGTCTCCTAAAGTGTAGACCATGTAGTGAGACT
TGGCATCGGTGCAGTCTGACACACCGCGGCAGGCGTTTTTATCAAATTAT
GAGTGCGAAGCGACATTATTGAGAGAGCTACTGTACTCTATTTATTTCCA
GGAGGTAATGATGCGACCTTGCTGGTGAAGGCTTTTTTAGACTTCTGGGC
TGTCGAATCGTGTGAGTGCGTGGCGCCTTATCCACTTCTGTTTTGGTGCA
TATTTTTTGTGCATATTTTCTTTGCCTACTTTATTTGAATGTTTTTTTTA
CATACTTTCTTCGCATACTTCATTTGCAACCTTTATTGATCAGGTTGGTT
CGGCCGAAGAGAACGAGCTCATCCTTACCGCCGTGCTCGATGCCTTGCAC
GAGACTTTGGGCATCCTTCTACGGGGTCAGGTGACTATTTTGATTACAGC
ACAGTACCCCACACCGCAACGGAGTACCGTGAAAGCATTCCATAACGCAG
TAGTTTTGCGGTATTTGATGGCGTCGCTTACGCTGACATCATTTCGTCGG
CGCACCCCAATTTTTCTACAAAGGGCGTACCGTTTACCGTAACCTTGGCT
AATCTTGTTTATTTGTCAAGTGTCGTGCAACCCTTTTCTCTAAGGTTTGT
CTTTTTGATACCGATCTTGGGGACCCAGTTGCTGTTTTCTTTCGCAAAAT
ACGGCATATGACATCCTGAGCCCGTTCCTCCCCATCCTGGTACGATATCT
TTAGAGGAAACAATGCCTACTTCGCACTCGCAAATGGTACTATATACTAT
ATATAACCCTTGCCCTGCACACACACACACGCAAACGGCACACGCCCAAT
CCAATCCATGCTCCCCACTCGGCGTTGTCATCTCCGTTTTTTTTGTCGCT
CCCGTTTGGCGATCTCAGATCGATCGACGATCTCTGCTGGAAAACCTAGC
GTTGGTGCTGCTCGCCATGGACGAGCTCATAGATGCCGGTAAAATCCTGG
AGATCGATCCTTCAGCGATTGCCAACCGCGTCCTGATGAGGGGTGCAGAC
GCGCGGCAACCCTTGGCCTCGGAGCTGACCGTTCAGCAGGTATAATACTG
AGTTTGGCGTGATTGCACGAGTTCGTTTCCTATTTGGTTGCTTCACTTCT
AAGGACTTACTAAAATCTATTGCTTGCGCCGCTCTCACCGCTGTTGGTAA
GGCTGAGGCTGAAGGATGAAAAAAGCGCATGCGGTGGTCGATAGCGGAGC
GCTCGCGGAGATAATTTCTTGTAGTCGCGCTTTGGCCTGCCGTTTCGGGG
GCTCTCGTGCGACCACCATCTGTCGCGTCGTTCCCCGACGCTGTCGCCTT
TTCTTCGGCCACCCGTCGATCGATGCGGTGTCGTGCAGGCCATCGCAACG
GCGCGCGAGGAGCTCATCAAGCGAATGGGAAACTAGCTCTAAGGCAGAGA
AGAGGGTCCAGGCGCTGGAAGTCGGAAACGCTTGCGACGATCGTAGGTCC
CGCATGCAGGCGACGGAAGAGACAGCGAGACAAACGATCGGAGTCGATGA
GTCTCTTCTCGTCCTATAGGAATATGGACCTGGGTTCTCTCTTGACAATT
TCGTTGGGCGGTTATGATTAGCTCTGTACCGAGATTACACCTCAGTGGGT
CAAGATTTACAGTACACTCCGGAGGAGAGGATGGAATGCAATAGCACTGA
CATGTTTCTTGCCGCAGGGACAAGATGCTACTCGTGCCAAACCTCAGTCG
AGAACCAAATTGGACACGCCCCGTGGCGTTAGATATTGTGGTACTACAGA
CAGTATTTCATGCGACGCTGTTGAGAACCATACAAAAATAAATGGAAATG
CGGTTTGCGTGTGACAAGCTTACGACTCATCGGGATACGTAAGGCTACTA
TTGAGGTGCACTGAATGCAAGGTTTGTCAGCTTGTTCTCCCCCTTAAAGG
TGTACCCTGTAACATGTTTACCAAAAACGGGTAATGCAAGGTCTCTGAGC
GGGATGGGTCTCACACGGGAGAGGCGGTGCTGTACCGGGCGTTGGTTGAG
CAGGCTCGACATTATTATTATAGTAGTGTTGCCGTAGCCCACATCTTGGG
TCTACCAGAAAAACACGAGATCACAACATTGGTTCCCAGCGAACTGACCA
AAAGGTGGGAAGTCAAACGGACAAACACTGATCTCCCTAACACGTATCGT
AGATCAACTACTGAAACTGTCATGCATCCTATTAGTCAGAACATTCTACC
AGTCTATCCGCATTTCAGAATCGACTTCTTACAACGGGAGTACTATTTTC
CGCCCACAGAGGTACGTTTTTGTCCAGCTACATATTATCAACAATGCCTC
GAGATGGTGGACATGACACGCCTTCGAGACGGATCGCATTAAGTTATAAC
CCTTACGAAGAGGGAGTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig662:298322..301590+

>mRNA_F-serratus_M_contig662.17617.1 ID=mRNA_F-serratus_M_contig662.17617.1|Name=mRNA_F-serratus_M_contig662.17617.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig662:298322..301590+ (Fucus serratus male)
ATGTTCGAGCACAAACTTTTCAGGAAGACCAAGAATATGTTCGAGCACAA
ACTTTTCAGGAAGACCAAGAATGTTAACGCTCGGTCGGAGGCGGACGTGG
TGCTGATGGACGAAGTCGTTGCGGTATTTAGGGGCGGGCTGGATGTGCAC
ATCTACGTGGTTAACGCTCGGTCGGAGGCGGACGTGGTGCTGATGGACGA
AGTCGTTGCGGTATTTAGGGGCGGGCTGGATGTGCACATCTACGTGGTTG
GTTCGGCCGAAGAGAACGAGCTCATCCTTACCGCCGTGCTCGATGCCTTG
CACGAGACTTTGGGCATCCTTCTACGGGGTCAGGTTGGTTCGGCCGAAGA
GAACGAGCTCATCCTTACCGCCGTGCTCGATGCCTTGCACGAGACTTTGG
GCATCCTTCTACGGGGTCAGATCGATCGACGATCTCTGCTGGAAAACCTA
GCGTTGGTGCTGCTCGCCATGGACGAGCTCATAGATGCCGGTAAAATCCT
GGAGATCGATCCTTCAGCGATTGCCAACCGCGTCCTGATGAGGGGTGCAG
ACGCGCGGCAACCCTTGGCCTCGGAGCTGACCGTTCAGCAGATCGATCGA
CGATCTCTGCTGGAAAACCTAGCGTTGGTGCTGCTCGCCATGGACGAGCT
CATAGATGCCGGTAAAATCCTGGAGATCGATCCTTCAGCGATTGCCAACC
GCGTCCTGATGAGGGGTGCAGACGCGCGGCAACCCTTGGCCTCGGAGCTG
ACCGTTCAGCAGGCCATCGCAACGGCGCGCGAGGAGCTCATCAAGCGAAT
GGGAAACTAGGCCATCGCAACGGCGCGCGAGGAGCTCATCAAGCGAATGG
GAAACTAG
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