mRNA_F-serratus_M_contig6604.17592.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: D8LDW7_ECTSI (Endo-1,3-beta-glucanase, family GH17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW7_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 5.110e-163 Identity = 226/324 (69.75%), Postives = 265/324 (81.79%), Query Frame = 1
Query: 31 MVGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANNDEMLTVENWENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFAREHASRDFVLFGPDPGYLDGGK---KYNNMFSAQYDAVVSALSKLG--VIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAAAASVNGTPLRPGHMDVYLFELYDESLKHGADHEKHFGLFDVKGAQK 987
MVGVNIGD +P+PW PEKIE AL+QAR+SGYF+CDAVKFWHCDA RVLPTA QDHIRKVMVHANN EML+V +W W+ +L P+V +R V KEIFLAVGNE+LAPWHVE FG RL PC++EV+ AL++T L+DRVKLVTPLEMSILG SYPPS GQ++EA+++VV +VVR LVRIGSPFCINVYPFFAREHASRDFVLFGPD GY DG +Y NMF+AQ+DAVV+ +SKL ++GAD +++VVTE GWP+A + M D SARRFTAGA AS GTPLRPG +DVYLFELYDE + GA HEKHFGLFD+ G K
Sbjct: 1 MVGVNIGDTLTPTPWAPEKIEQALAQARSSGYFSCDAVKFWHCDASRVLPTAQQDHIRKVMVHANNHEMLSVSDWRAWVETHLSPVVGGLRGQRVHKEIFLAVGNEALAPWHVEMFGRRLVPCMKEVYTALLQTGLSDRVKLVTPLEMSILGASYPPSAGQVAEAHLEVVSEVVRFLVRIGSPFCINVYPFFAREHASRDFVLFGPDEGYTDGEGGCLRYTNMFNAQFDAVVTGISKLKDCIVGADQLEMVVTEVGWPTAGSGMADKESARRFTAGATLASTKGTPLRPGRLDVYLFELYDECQQDGAAHEKHFGLFDIGGCPK 324
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A5K1GLM5_9MAGN (Uncharacterized protein (Fragment) n=4 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GLM5_9MAGN) HSP 1 Score: 152 bits (385), Expect = 7.850e-39 Identity = 116/332 (34.94%), Postives = 169/332 (50.90%), Query Frame = 1
Query: 25 QKMVGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANNDEMLTVEN----WENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAY--VDVVRDVVRLLVRIGSPFCINVYPFFAREHASRD----FVLFGPDPGYLDGGKK--YNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPS---ARRFTAGAAA--ASVNGTPLRPGH-MDVYLFELYDESLKHGADHEKHFGLF 966
Q +GVN G++ P PP + L Q+ + G V+ + D E V+ I + + +N ++ ++ + W+ N+ P + ++VGNE L+ + + L P ++ +HAAL+E LAD++K+ T M++L S PPS G Y VDV++ +V L + GSP IN YP+FA R F LF + G D K Y NMF AQ DAV SAL+ LG +D+VV ETGWP GPS A+ + G A S++GTPLRPG +D Y+F L+DE LK GA E++FGL+
Sbjct: 2 QSYIGVNYGEVADNLP-PPATVAKLL-QSTSIG-----KVRMYGADPE-VIKALAHTGIG-IFIGTSNGDIFSMSGDPSAAKQWVAANILPYY------PASDIVLVSVGNEVLS-YGDGNMVSHLVPAMQNLHAALLEVSLADKIKVTTVHSMAVLQQSDPPSTGAFRPTYAGVDVMKQLVAFLQQTGSPLAINPYPYFAYGSDPRPETLAFCLFQQNQGRFDPNTKITYYNMFDAQVDAVHSALASLGFKD---VDIVVAETGWPYQGGATEVGPSVENAKAYNGGLVAHLRSMSGTPLRPGKPVDTYIFALFDEDLKGGATSERYFGLY 314
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: B8LRW3_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LRW3_PICSI) HSP 1 Score: 152 bits (384), Expect = 5.420e-38 Identity = 113/340 (33.24%), Postives = 163/340 (47.94%), Query Frame = 1
Query: 13 ASVSQKMVGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANND--EMLTVENWENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFARE----HASRDFVLFGPDPGYLDGGK--KYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAAAASVN---------GTPLRPGH-MDVYLFELYDESLKHGADHEKHFGLFDVKG 978
++ S G+N G + P P ++ L QA + VK + + E VL I ++ N + M W+N N+R + K I +AVGNE + A L P ++ +H+ALV +++ TP +++LG SYPPS G +++ ++ L +IGSPF IN+YP+FA + S D+VLF P+ G +D +YNNM AQ DAV SALS LG ++V V+ETGWPS MGD A A + N GTPLRP + YLF L++E +K G E++FGLF G
Sbjct: 32 SNTSASTTGINYGQVADNLPSP--EVVVGLLQANN-----INKVKLFSAN-ETVLKAFANTGIELIVGIGNENVGNMTDPTKATEWVNENIRTYL------PATKIIGIAVGNEVYTGTDTQLM-ANLVPAMKNIHSALVSIGADMNIQITTPHSLAVLGNSYPPSAGSFVSDLNSLMKPLLDFLSQIGSPFFINIYPYFAYKSNPSQVSLDYVLFQPNAGVIDPNNNIRYNNMLYAQVDAVYSALSALGYAN---LEVTVSETGWPS----MGDASEAGATLQNAQTYNGNLLQLLAQNQGTPLRPKLVLQAYLFALFNEDMKTGPTSERNFGLFKPDG 349
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: Q0J034_ORYSJ (Os09g0533200 protein n=10 Tax=Oryza TaxID=4527 RepID=Q0J034_ORYSJ) HSP 1 Score: 148 bits (374), Expect = 4.570e-37 Identity = 89/227 (39.21%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 328 FLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFAREH----ASRDFVLFGPD-PGYLDGGKKYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAA--AASVNGTPLRPG-HMDVYLFELYDESLKHGADHEKHFGLFDVKGAQ 984
+LAVGNE L ++ + + L P + +HAALV L D+VK+ + S+L SYPPS G A +DV+R ++R L G+PF +N YPF + + + LFG P DG Y NMF A DA+ +AL + G A+ + VTETGWP+A +A + A A GTP RPG ++V+LF+LYDE K GA+ E+HFG+F G++
Sbjct: 122 YLAVGNEVL--YNNQFYAPHLVPAMHNLHAALVSLGLGDKVKVSSAHASSVLASSYPPSAGAFDAASLDVLRPMLRFLADTGAPFMVNTYPFISYVNDPVNVQLGYALFGAGAPAVSDGALVYTNMFDATVDALAAALDREGF---GAVPIAVTETGWPTAGHPAATPQNAAAYNAKIVERVARGAGTPRRPGVPVEVFLFDLYDEDGKPGAEFERHFGIFRADGSK 343
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: UPI0009E24B0E (glucan endo-1,3-beta-glucosidase-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E24B0E) HSP 1 Score: 144 bits (364), Expect = 9.590e-36 Identity = 87/241 (36.10%), Postives = 135/241 (56.02%), Query Frame = 1
Query: 262 WINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFAR----EHASRDFVLF-GPDPGYLDGGKKYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAAAASVNGTPLRPG-HMDVYLFELYDESLKHGADHEKHFGLF 966
W+N N++P + F+ ++AVGNE + H + + P ++ + ALV L DR+K+ T + ++LG SYPPS G S + +++ +V L +P +NVYP+F+ + S D+ LF P P +DG +Y N+F A DA+ SAL +G G D +++VV+ETGWPS ++ +A+ + + GTP RPG H+D YLF L+DE+LK E H+GLF
Sbjct: 100 WVNDNIQPFSPDVN----FR--YIAVGNELIPGSHPQD----ILPAMQNLQNALVSVGLQDRIKVSTSVSTNVLGNSYPPSAGTFSSNILPILQPIVAFLSANDAPLLVNVYPYFSYIGNPDSISLDYALFTSPAPVVIDGQLQYQNLFDAIIDALFSALENVG--GGD-VNLVVSETGWPSDGEEVATLQNAQTYLSNLINHVGQGTPKRPGIHIDTYLFALFDENLKQPQGTENHYGLF 327
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A6J1EML1_CUCMO (Glucan endo-1,3-beta-D-glucosidase n=11 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1EML1_CUCMO) HSP 1 Score: 145 bits (365), Expect = 2.920e-35 Identity = 107/330 (32.42%), Postives = 165/330 (50.00%), Query Frame = 1
Query: 34 VGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANNDEMLTVENW---ENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFARE----HASRDFVLFGPDPGYLDGGK--KYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPS---ARRFTAGAAA--ASVNGTPLRPGH-MDVYLFELYDESLKHGADHEKHFGLFDVKG 978
VGVN G + + P P E+ + ++ G A K DA + A + + +V N+ + ++N + W+ N++ + + ++F VGNE L ++ L P ++ VH ALV L +V + T ++IL SYPPS G VD + ++ V+IGSPF IN YP+FA + S DFVLF P+ G LD G +Y+NM AQ DAV SAL +G + V ++ETGWPS D G + A+++ GTPLRP +++Y+F L++E++K G E+++GLF G
Sbjct: 32 VGVNYGQIANNLPTP----ENVIPLVKSIG-----ATKVKLYDASPKVLRAFANTSVEFIVGLGNEYLAKMKNTACAQEWVKNNVQAYLPGTKITSIF------VGNEVLT-FNDTSLNDNLLPAMQSVHTALVNLGLDKQVAVTTAHSLAILETSYPPSAGIFRSDLVDCLVPILDFQVKIGSPFLINAYPYFAYKANPKQVSLDFVLFQPNQGVLDPGSNLRYDNMLFAQIDAVYSALD---AVGYKKLPVHISETGWPSKGDDDEAGATPENAKKYNGNLLKYICQKKGTPLRPSSDLNIYVFALFNENMKPGPTSERNYGLFKPDG 342
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A6P5F4P1_ANACO (glucan endo-1,3-beta-glucosidase 10 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F4P1_ANACO) HSP 1 Score: 147 bits (371), Expect = 4.180e-35 Identity = 120/334 (35.93%), Postives = 160/334 (47.90%), Query Frame = 1
Query: 34 VGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANNDEMLTVENWE-----NWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQI-SEAYVDVVRDVVRLLVRIGSPFCINVYPFFAREH----ASRDFVLFGPDPGYLDGGK--KYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAAAASVN----------GTPLRP-GHMDVYLFELYDESLKHGADHEKHFGLF 966
+GVN G + + P PP+ +E SQ T VK + D VL IR V+ N E+L W+ RN+ + V AVGNE A A L P + VHAAL L VK+ +P+ ++ L SYPPS G S+ V+R ++ LL R GS +N YPFFA S D+ LF P+ G LD G KY ++F AQ DAV +A+ G +G + + VVV+ETGWPS GDG AAA + N GTP RP G +DV+LF L++E LK G E+++GLF
Sbjct: 36 IGVNYGRVANNLPPPPKVVELLKSQGITQ-------VKLYDADPG-VLRAFAGSGIRVVVALPN--ELLAAAASRPGYALGWVQRNVAAYYPATQIAAV------AVGNEVFAS--PRNLTALLVPAMTNVHAALARLGLDAAVKVSSPIALTALRASYPPSAGAFRSDLAEPVMRPMLDLLGRTGSYLMVNAYPFFAYSANAALISLDYALFRPNAGVLDPGSGLKYYSLFDAQVDAVYAAM---GAVGGEEVRVVVSETGWPS----KGDGKETGAGAGNAAAYNGNLVRRVLSGNAGTPRRPQGDVDVFLFGLFNEDLKPGPTSERNYGLF 344
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A2K1XG86_POPTR (Glucan endo-1,3-beta-D-glucosidase n=8 Tax=Populus TaxID=3689 RepID=A0A2K1XG86_POPTR) HSP 1 Score: 143 bits (361), Expect = 6.670e-35 Identity = 108/327 (33.03%), Postives = 158/327 (48.32%), Query Frame = 1
Query: 34 VGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPTACQDHIRKVMVHANNDEMLTVENW---ENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAY-VDVVRDVVRLLVRIGSPFCINVYPFFAREHASRDFVLFGPDPGYLDGGKK--YNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAAAASVN---------GTPLRPGH-MDVYLFELYDESLKHGADHEKHFGLF 966
+GVN G L + P PP ++ H L ++ + V+ + E +L I V V ND++ + N + W+ N++P VR + VGNE ++ + + A L P ++ +HAALV+ L R+K+ TP + IL S PPS G+ + Y V++ V+ L SPF IN YPFF + D+ LF G D K Y NM AQ DAV SA+ LG +++V++ETGWPS +GD AA + N GTPL P + Y+F L++E LK G E++FGLF
Sbjct: 33 IGVNYGTLANNLP-PPAQVAHFLLESTI-----INRVRLFDASTE-ILRAFAHTGIA-VTVTVTNDQIPHLTNIGFAQEWLKSNVQPHVRTTNIVRIL------VGNEVISTAN-KLLIASLVPAMQALHAALVDASLDSRIKISTPHSLGILSSSSPPSGGKFRQGYDTHVLKPVLSFLRATNSPFMINPYPFFGSSPETLDYALFRTSSGVFDENTKLSYTNMLDAQLDAVFSAMKLLGFSD---IEIVISETGWPS----LGDSSQVGVDAESAAQYNRNLMQHVTSGAGTPLMPNRTFETYIFALFNEDLKPGPTCERNFGLF 337
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A8J5VKG8_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VKG8_ZIZPA) HSP 1 Score: 142 bits (358), Expect = 8.890e-35 Identity = 86/227 (37.89%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 328 FLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFAR----EHASRDFVLFGPD-PGYLDGGKKYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAA--AASVNGTPLRPG-HMDVYLFELYDESLKHGADHEKHFGLFDVKGAQ 984
+LAVGNE L ++ + + L P ++ +H+ALV L ++K+ + S+L SYPPS G A + V+R +++ L G+PF +N YPF + + + LF P DG Y N+F A DA+V+AL K G AM V VTETGWP+A +A + A AA GTP RP ++V+LF+LYDE K GA+ E+HFG+F +G++
Sbjct: 123 YLAVGNEVL--YNNQFYAPHLVPAMKNLHSALVTLGLDGKIKVSSAHASSVLASSYPPSAGAFDAASITVLRPMLQFLADTGAPFMVNTYPFISYVNDPANVQLGYALFAAGAPAVTDGALVYTNLFDATLDALVAALEKEGF---GAMPVAVTETGWPTAGHPAATPQNAAAYNAKIVERAARGAGTPRRPSLPVEVFLFDLYDEDGKPGAEFERHFGIFRAEGSK 344
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Match: A0A2K3M1U4_TRIPR (Glucan endo-1,3-beta-D-glucosidase n=2 Tax=Trifolium TaxID=3898 RepID=A0A2K3M1U4_TRIPR) HSP 1 Score: 142 bits (357), Expect = 9.950e-35 Identity = 84/250 (33.60%), Postives = 137/250 (54.80%), Query Frame = 1
Query: 256 ENWINRNLRPIVRRIRRCTVFKEIFLAVGNESLAPWHVERFGARLAPCLREVHAALVETRLADRVKLVTPLEMSILGCSYPPSEGQISEAYVDVVRDVVRLLVRIGSPFCINVYPFFA----REHASRDFVLFGPDPGYLDGGKKYNNMFSAQYDAVVSALSKLGVIGADAMDVVVTETGWPSACADMGDGPSARRFTAGAA--AASVNGTPLRPGHMDVYLFELYDESLKHGADHEKHFGLFDVKGAQK 987
+NW+ + + P + + K ++ VGNE + P E + P L + A+ L D++K+ ++M+++G SYPPS+G S+ ++ ++ LV G+P NVYP+FA ++ D+ LF G D G Y N+F AQ D+V +AL K +G + ++V+E+GWPSA D +A+ + + S NGTP RPG ++ YLF ++DE+ K+GA E+HFGLF+ + K
Sbjct: 101 KNWVTKYVTPYAQDV------KIKYITVGNE-IHPSDNE--AQSILPALNNIQNAISSANLQDQIKVSIAIDMTLIGKSYPPSDGVFSDQAKSYIQPIIDFLVSNGAPLLANVYPYFAYIGDKQSIPLDYALF-KQQGNNDVG--YQNLFDAQLDSVYAALEK---VGGSNVKIIVSESGWPSAGEDSATTDNAKTYLSNLINHVKSGNGTPKRPGTIETYLFAMFDENQKNGAATEQHFGLFNPDKSSK 335 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6604.17592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6604.17592.1 >prot_F-serratus_M_contig6604.17592.1 ID=prot_F-serratus_M_contig6604.17592.1|Name=mRNA_F-serratus_M_contig6604.17592.1|organism=Fucus serratus male|type=polypeptide|length=321bp MVGVNIGDLFSPSPWPPEKIEHALSQARTSGYFTCDAVKFWHCDAERVLPback to top mRNA from alignment at F-serratus_M_contig6604:10554..13385+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6604.17592.1 ID=mRNA_F-serratus_M_contig6604.17592.1|Name=mRNA_F-serratus_M_contig6604.17592.1|organism=Fucus serratus male|type=mRNA|length=2832bp|location=Sequence derived from alignment at F-serratus_M_contig6604:10554..13385+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6604:10554..13385+ >mRNA_F-serratus_M_contig6604.17592.1 ID=mRNA_F-serratus_M_contig6604.17592.1|Name=mRNA_F-serratus_M_contig6604.17592.1|organism=Fucus serratus male|type=CDS|length=1926bp|location=Sequence derived from alignment at F-serratus_M_contig6604:10554..13385+ (Fucus serratus male)back to top |