mRNA_F-serratus_M_contig660.17579.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: A0A835Z5J0_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J0_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.630e-46 Identity = 147/513 (28.65%), Postives = 194/513 (37.82%), Query Frame = 1
Query: 49 RQRTTLCIFYEKGWCKSGDDCRFTHGTSDKRKLLGDGVEGALGK--PATIREPCXXXXXXXXXXXXXXXXXXSSYSADEAHRRETL--------ADNRPSKRPAPAALASQRCQPVGVVTVAEQPPPIRRGMLMVTKQDLLPLDGGDTDTEDSDLEDEP---------WEIPGSNEGSAYFFGAPGRFDAESGGXXXXXXGVSSATSGKGHGSWRDIVQGSSETCEDPTVANDGKPLLVVDATVRALVSSAAADAGVDVEVKPPRDEARAARAAAAFLALNSALSSPRAGKRKVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERISDRFGILVGCRHSYCLKCIREWRG-----KSQKRNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSF 1515
R LC FY++G C + +CRF HG SD+R L+G GA G PA+I+ C SSY ADEA RR + A R S P L R + V Q ++K +L G ++ ++ + E WE P + AYF+GA G F P + V+ V R+VC FF G CR+G CRN+H AL+ E+ +S A+CG+C + + RFG+L GC H++CL+CIR WR ++ R CP C PSHF+VPS LV P RK LV RYKE+L+ IPC+HF G +CPFG SCFYAHL DGS P R+R A G++E +V LSSF
Sbjct: 7 RTSDMLCKFYDRGKCVNDINCRFRHGPSDRRPLVGAAAAGAAGAAPPASIKVSCRYHAQGRCSNGSACPYSHSSYEADEAVRRRQVQQXXXXLQARARQSAMPQQRPLFGSRSEDQSVAEATAQ----------ISKLTVL----GKSEAKEQETHQEKDSGRNGEVEWEFPSDED--AYFYGAAGTFA--------------------------------------PQXXXXXXXXXXXXXXXWSAVAVTNVPDNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVCQFFLSGTCRYGVACRNAHSAAXXXXXXXXT-------------------------------------ALEAEERERSARAECGICYDPVQGRFGVLTGCDHAFCLECIRNWRAVGVREQAAVRACPLCRAPSHFIVPSARLVAHPARKAALVERYKETLARIPCRHFASG--DCPFGGSCFYAHLAADGSRAAPPQLRMRAGADGETEVHGDVQLSSF 426
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: D7G211_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G211_ECTSI) HSP 1 Score: 160 bits (404), Expect = 3.380e-38 Identity = 158/505 (31.29%), Postives = 208/505 (41.19%), Query Frame = 1
Query: 28 MASYALGRQRTTLCIFYEKGWCKSGDDCRFTHGTSDKRKLLGDGVEGALGKPATIR--------EPCXXXXXXXXXXXXXXXXXXSSYSADEAHRRETLADNRPSKRPAPAALASQRCQPVGVVTVAEQPPPIRRGMLMVTKQDLLPLDGGDTDTEDSDLEDEPWEIPGSNEGSAYFFGAPG--RFDAESGGXXXXXXGVSSAT-SGKGHG----------SWRDIVQ--------GSSETCEDPTVANDGKPLLVVDATVRALVSSAAADAGVDVEVKPPRDEAR----------AARAAAAFLALNSALSSPRAGK------------RKVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGH----------QEEEVAVVEEEAEGAEEERDLGKDAVA-KDAALDEAEKAQSQVADCGVCLERI------SDR-FGILVGCRHSYCLKCIREWRGKSQKRNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKES 1335
MA+ + GRQ TLC FYEKG C+ G CRFTHGTSD R+L DG G P R EPC S+ +D++ + +RP +S + P G ++ RG + T + P PG SA G R E G SS+ SG G SW DIV G + + + G D ++ A + K R+ AR +A A A L+ + P G ++ C FFARG CR+G+ CR SH+ VE T G ++E+ V E + + E G+D VA ++AALDEAEK QS+ A+CG+CLE++ DR FGILV CRH YCL CIREWR KS CPECG+ S V+PS TLVTDP RK+ L ++S
Sbjct: 1 MAAPSSGRQSRTLCTFYEKGSCRYGASCRFTHGTSDSRELRADGAAGETQTPRQARPTASTSSKEPCRFFAKGKCVRGASCRFLHSATGSDDSSPAAAGDGDETGRRP---RSSSGKATPNGGCAEGDED----RGRTVTTAKRPA----------------RPCPSPGRKPSSAPAAAVAGDSRVRPEGVCVKRGYAGCSSSKRSGGSSGGDEVARRLQRSWTDIVTKDVPMDAGGGTASPASTAITESGSSSEENDNDAEEPIAPARRKLAANAADKRDRNTARXXXXXXXXXTSAPAPGAAAPLDQRRTQPAGGSDSGESDGKGKQAKQACVFFARGRCRYGDRCRFSHDA-----VEETPAAGGGARXXXXXXXXAGRKEKRGVASEPS--SHESEGFGEDEVAAREAALDEAEKIQSRSAECGICLEKVRKLGKVKDRVFGILVSCRHVYCLGCIREWRDKSDNHACPECGLTSSLVIPSKTLVTDPDRKKRLALELRQS 475
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: H3H388_PHYRM (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H388_PHYRM) HSP 1 Score: 153 bits (387), Expect = 1.130e-36 Identity = 86/226 (38.05%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 868 KVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWS--AAGDSEAMREVHLSSFF 1518
K+C FF +G CR+G+ C +H L PE VE +E+ G EE+ + SQ +CG+C E I +RFG+L GC HS+CL C+R WRG Q R CP C V + F++PS +VT P RK+ L+ Y+++LS IPC+HF+ G CPFG+SCFYAH DG+L A+ ++R + A G + +R+V L +F
Sbjct: 208 KICTFFLQGLCRYGDTCFYAHSL--PERVESEEEMLAMG---EEIRL--------------------------------SQDLECGICYENIIGKGERFGLLSGCSHSFCLTCLRNWRGADQPKQTVRQCPVCRVETKFIIPSSRMVTKPERKKFLIDVYRKNLSAIPCRHFDEGRGTCPFGTSCFYAHRYPDGTL---ASRQVRTAVDADGQYDVLRQVRLEHYF 393
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: A0A3R7GYF0_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GYF0_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.830e-36 Identity = 85/230 (36.96%), Postives = 121/230 (52.61%), Query Frame = 1
Query: 853 RAGKRKVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRG-----KSQKRNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSFF 1518
RA K+C FF +G CR+G+ C +H L E VE +E+ G EE+ + SQ +CG+C E + +RFG+L GC HS+CL C+R WRG K R CP C V ++F++PS +VT P RK++L+ Y+++LS IPC+HF+ G CPFG+SCFYAH DG+L R A G + +R+V L ++F
Sbjct: 226 RAAPPKICTFFLQGLCRYGDTCFYAHSL--RENVENEEEMISMG---EEIRL--------------------------------SQDLECGICYENVVAKGERFGLLSGCNHSFCLTCLRNWRGIADQPKQTVRQCPVCRVETNFIIPSGRMVTKPERKKVLIDEYRKNLSGIPCRHFDEGRGTCPFGTSCFYAHRHPDGTLTSRQV-RTAVDADGQYDVLRQVRLENYF 417
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: A0A7S2WI76_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WI76_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.030e-36 Identity = 87/245 (35.51%), Postives = 121/245 (49.39%), Query Frame = 1
Query: 835 SALSSPRAGKRKVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI----SDRFGILVGCRHSYCLKCIREWRGKSQK---------RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSFFDPRL 1530
S + A VC FF G CRFG+ CRN+H + E E T E ++ E++ E E ER+ D +CG+CLE I + RFGIL GC H +CLKCI++WR K R CP C PS+FV+P +V DP RK++L+ Y++ + TI C+HF+ G CPFG+SCFY H+ +G++ P RI G + L ++FD L
Sbjct: 200 STMEGQDASSGPVCKFFLAGNCRFGDTCRNTHTVQTQEQQEHT----------EVISRCEQDVEMTEFERECSVD------------------LECGICLENIMQTSTKRFGILTGCDHVFCLKCIKDWRSSDTKSSENGQVLVRRCPLCREPSYFVIPCDRMVRDPERKKMLIEGYQQGMGTIHCKHFDRGNGTCPFGTSCFYKHVYSNGTVQDPGEVRIYRDGYGGTRTESVNRLGAYFDKAL 416
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: F0VZR4_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZR4_9STRA) HSP 1 Score: 152 bits (385), Expect = 4.990e-36 Identity = 82/228 (35.96%), Postives = 121/228 (53.07%), Query Frame = 1
Query: 871 VCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK-----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSFFDPRL 1530
+C+F+ +G C++G C SH L P+ E D+G+ V +E KA +++ +C +C E++ +RFG+L GC H++CL CIR WRG S + R CP C V + +++PS LVTDP RK+ L +K++L++IPC+HF+ G ECPFG+SCFY H DGSLD R A G + +R+V L F +L
Sbjct: 255 ICSFYIQGVCKYGNKCIFSHSLQVPD------------------------------ESDIGRQLV------EEEVKASAEI-ECNICYEQVLAKHERFGLLSGCDHAFCLSCIRNWRGHSDQSKQNIRKCPVCRVETAYIIPSSRLVTDPERKQALQETFKQNLASIPCRHFDQGRGECPFGTSCFYKHQYSDGSLDARQV-RTAVDADGHYDVLRQVRLDHFLGSQL 444
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: G5AF51_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AF51_PHYSP) HSP 1 Score: 152 bits (383), Expect = 5.350e-36 Identity = 85/227 (37.44%), Postives = 123/227 (54.19%), Query Frame = 1
Query: 868 KVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK-----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWS--AAGDSEAMREVHLSSFF 1518
K+C FF +G CR+G+ C SH L PE VE +E+ G EE+ + S +CG+C E I +RFG+L GC HS+CL C+R WRG + + R CP C V ++F++PS +VT P RK++L+ Y+++LS IPC+HF+ G CPFG+SCFYAH DG+L A+ +R + A G + +R+V L +F
Sbjct: 224 KICTFFLQGLCRYGDTCFYSHSL--PEKVESEEEMLAMG---EEIRL--------------------------------SADLECGICYENILGKGERFGLLSGCNHSFCLTCLRNWRGSADQPKQTVRQCPMCRVETNFIIPSSRMVTKPERKKVLIDVYRKNLSAIPCRHFDEGRGICPFGTSCFYAHRYPDGTL---ASREVRTAVDADGQYDVLRQVRLEHYF 410
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: K3WR91_GLOUD (RING-type E3 ubiquitin transferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WR91_GLOUD) HSP 1 Score: 150 bits (380), Expect = 2.050e-35 Identity = 80/225 (35.56%), Postives = 114/225 (50.67%), Query Frame = 1
Query: 868 KVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK-----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSFF 1518
K C FF +G CR+G C H L+ E VE +++ G E +S +C +C + I +RFG+L GC H++CL C+R WRG + + R CP C V +HF++PS +VT P RK++L+ Y+++LS IPC+HF G CPFG+SCFYAH DG+LD R A G + +R+V L +FF
Sbjct: 249 KTCTFFLQGLCRYGNSCFYMHALN--EDVETEQDMVEMGR-----------------------------------ELQESMDLECNICYDNILQKEERFGLLSGCNHAFCLTCVRNWRGNADQPKQTVRQCPVCRVETHFIIPSSRMVTSPERKKVLIEAYRKNLSGIPCRHFNEGQGTCPFGTSCFYAHRYSDGTLDSRQV-RTAVDADGHYDVLRQVRLENFF 435
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: A0A024G2Q9_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2Q9_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.950e-35 Identity = 81/229 (35.37%), Postives = 117/229 (51.09%), Query Frame = 1
Query: 868 KVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK-----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWSAAGDSEAMREVHLSSFFDPRL 1530
++C+F+ +G C++G C SH L+ P+ + HQ L E E S A+C +C E+I +RFG+L GC H +CL CIR WR S + R CP C V + +++PS +VT+P RK+ L +K++LS+IPC+HF+ G ECPFG+SCFY H DGSLD+ R A G + +R+V L F +L
Sbjct: 191 EICSFYVQGVCKYGNRCVFSHSLEVPDESDAE-------HQ------------------------------LMEEELKASAEAECNICYEQILAKHERFGLLSGCDHVFCLSCIRNWRDHSDQPKQNIRQCPVCRVETAYIIPSSRMVTNPERKQALQDNFKQNLSSIPCRHFDQGRGECPFGTSCFYKHQYPDGSLDVRQV-RTAVDADGHYDVLRQVRLDHFLSSQL 381
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Match: A0A329S6E1_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S6E1_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.160e-35 Identity = 85/226 (37.61%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 868 KVCAFFARGCCRFGEHCRNSHELDQPETVEVTKEVDGQGHQEEEVAVVEEEAEGAEEERDLGKDAVAKDAALDEAEKAQSQVADCGVCLERI---SDRFGILVGCRHSYCLKCIREWRGKSQK-----RNCPECGVPSHFVVPSHTLVTDPVRKELLVSRYKESLSTIPCQHFEFGVSECPFGSSCFYAHLKKDGSLDLPATPRIRWS--AAGDSEAMREVHLSSF 1515
K+C FF +G CR+G+ C SH L PE VE +E+ G EE+ + SQ +CG+C E I +RFG+L GC HS+CL C+R WR + R CP C V + F++PS +VT P RK++L+ Y+++LS IPC+HF+ G CPFG+SCFYAH DG+L A+ ++R + A G + +R+V L +F
Sbjct: 232 KICTFFLQGLCRYGDTCFYSHSL--PERVESEEEMLAMG---EEIRL--------------------------------SQDLECGICYEVILQKGERFGLLSGCNHSFCLTCLRNWRSSENQPRQTVRQCPVCRVETKFIIPSGRMVTRPERKKILIDVYRKNLSGIPCRHFDEGRGTCPFGTSCFYAHRYPDGTL---ASRQVRTAVDADGQYDVLRQVRLENF 417 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig660.17579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig660.17579.1 >prot_F-serratus_M_contig660.17579.1 ID=prot_F-serratus_M_contig660.17579.1|Name=mRNA_F-serratus_M_contig660.17579.1|organism=Fucus serratus male|type=polypeptide|length=502bp MASYALGRQRTTLCIFYEKGWCKSGDDCRFTHGTSDKRKLLGDGVEGALGback to top mRNA from alignment at F-serratus_M_contig660:73978..80432- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig660.17579.1 ID=mRNA_F-serratus_M_contig660.17579.1|Name=mRNA_F-serratus_M_contig660.17579.1|organism=Fucus serratus male|type=mRNA|length=6455bp|location=Sequence derived from alignment at F-serratus_M_contig660:73978..80432- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig660:73978..80432- >mRNA_F-serratus_M_contig660.17579.1 ID=mRNA_F-serratus_M_contig660.17579.1|Name=mRNA_F-serratus_M_contig660.17579.1|organism=Fucus serratus male|type=CDS|length=3012bp|location=Sequence derived from alignment at F-serratus_M_contig660:73978..80432- (Fucus serratus male)back to top |