mRNA_F-serratus_M_contig66.17565.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: D8LHT5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT5_ECTSI) HSP 1 Score: 598 bits (1543), Expect = 3.790e-202 Identity = 389/633 (61.45%), Postives = 458/633 (72.35%), Query Frame = 1
Query: 271 NARRETWAKVARARGAHFARPDRKPSPAATARGGS-----------KGRDRGGAVTGRIENDG---PKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRSTLRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEPLGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVLESFSLGMCPLLTSGAIQELFQYSGSSADVASS----NSAAATVPE-----PSWRTKGGVAGKGXXXXXXXXXXXAAGAVDANATLNEGDDGEENAFDEGESDPAGRGPSPPSIIASSASGGGARVGGIGHAMLKSRLTRVSLRGMSKVDDSAVMAIAAACSDGLRDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHLVDASPKMRSMRLWGCTQVGERFLKGHSRKELVISRY 2100
N+RRE +A+VARARGAHFARPD+ P+P TAR GR RG A +G PKE WPGP++EARRLMD RE AA RESIR NG A+ DSDDE PP +K++WKP G+GS +GKSR + +LFRLCLDLLA+NFDH+ESLGDVS EVRNHLA V+CR+LKLTTEALQRLSEPGVTE+ILPDCSRIEPDQMR+S+LQCR TLRVLRLGTCGRC+GD T+EAL AGG+PRLE+A+L+GTY+LTDAGVL+LL+C PRLTG E+ +NSRI+ K+LE MVD ERP+G ALT+LSL DCI LGP+ LEPL MACLE LSLSGV KLTD +L+Q L A G +LRHLDISDC +TD +LKA+GE C VLES +LG+CPLLTSGAIQE+FQYSGSSA+ ++ N +A T + P+ +GG G XXXXXXXXXX +A D G+ GGGAR G H MLKSRLTRVSLRG+++VDD AV A+AAACS LR LDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GHLVD+ +RS+ LWGC QV +RFL+GH+++ELVISRY
Sbjct: 163 NSRREAFAQVARARGAHFARPDKPPAPG-TARAXXXXXXXXXXXXXSGRRRGAASDAASAGEGGDAPKELWPGPFAEARRLMDNREAAAALRESIRVNGKAQPASDEDGDSDDEGDETPPPIKVDWKPTGKGSRSGKSRTIPSLFRLCLDLLADNFDHIESLGDVSPEVRNHLAAVMCRQLKLTTEALQRLSEPGVTEIILPDCSRIEPDQMRNSILQCRRTLRVLRLGTCGRCVGDATLEALTKAGGVPRLEMASLAGTYQLTDAGVLELLSCCPRLTGLELSANSRITLKALEKMVDKERPIGMALTTLSLTDCIQLGPDELEPLKGMACLERLSLSGVIKLTDGILLQ-ILEACGGRLRHLDISDCTDLTDATLKAIGERCGVLESLNLGLCPLLTSGAIQEIFQYSGSSAEASTGRLAQNPSATTAQDDGGINPACSGEGGAL-NGKXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAEDGGD-------------------GGGARKG---HTMLKSRLTRVSLRGLAQVDDKAVEAMAAACSGSLRSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCRSATEDGLGHLVDSCDGLRSLCLWGCMQVTDRFLRGHTKEELVISRY 770
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A836CJL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL7_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.740e-55 Identity = 231/704 (32.81%), Postives = 310/704 (44.03%), Query Frame = 1
Query: 280 RETWAKVARARGAHFARPDRKP---SPAATARGGSKGRDRGGAVTGRIENDGPKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHP------------------------PTVKLEW--KPRGRGSTAGKSRGVLTLFRLCLD-----------------------------LLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRD----------------------------------------SLLQCRSTLRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEPLGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVLESFSLGMCPLLTSGAIQELFQYSGSSADVASSNSAAATVPEPSWRTKGGVAGKGXXXXXXXXXXXAAGAVDANATLNEGDDGEENAFDEGESDPAGRGPSPPSIIASSASGGGARVGGIGHAMLKSRLTRVSLRGMSK--VDDSAVMAIAAACSDGLRDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHLVDASPKMRSMRLWGCTQVGERFLKGHSRKELVI 2091
RE A+VAR R AHFAR D+ P +PA R S G G+ E E W GP++ ARRL++ R AA R+ + NG +EE S ++ D + P P W + RGRGS G++ V LF LCL L+A+NFD VE LGDV+ EVRN L +LCR+L+LT E L RL+ PGV E++LPDCSRI+ QM+ +LL+CR TL L L CGRC TV AL +AGGLP + AL+GTY L D + LLA +PRL + ++R+ + A+ D G+ L SLSL C + AL + R L +L LSGVA +TD+ L + L A G KL L ++ C TD +++A+ SL PL+T A+ LF + ++ D+ + V XXXXXXXXXXX HA+ L V+LRG ++ VDD+ V+ +A AC+ LR+ D XXXXXXXXXXXXXX G LVDA+P++R++ LWG Q+G+ FLK HS +EL +
Sbjct: 195 REAQARVARDRAAHFARVDKTPEATAPAVVRRISSAG----GSAAAAAEP----EEWCGPFATARRLLNARADAAAARQR-KLNGEDVSEEDSDAENGDGSAKKPAKPAHKGANYARRCATDGVRSGTVPQAAWWWSGEGRGRGSLIGRACRVAPLFNLCLSVVVQWXXXXXXXXXXXXXXXXXXXXXXXXLVADNFDCVEELGDVTPEVRNRLGALLCRQLQLTPEVLSRLAAPGVAEVVLPDCSRIDAQQMQXXXXXXXXXXXXXXQPLPRSAAVVPRHAVRFDHTMASLGVTTLLRCRETLAALELRMCGRCFTGATVAALASAGGLPSVTRLALTGTYLLPDTALDALLAAAPRLRHLTLAQSARLGARGAAAIADR---CGATLQSLSLASCEGVDAAALAHIARCGALTALDLSGVAAVTDEALAR-VLSACGEKLEALRVAHCDXXTDGAVQAI---------LSLADVPLVTGAALAVLFGDAAAAHDLGDAFCGPPLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS-------------------------------------------------HALAS--LRAVALRGAARGGVDDAVVVPLARACAGTLREADFGGSGXXXXXXXXXXXXXXASLVRLDLSFCRGVSDAGV-GRLVDAAPRLRALALWGDLQIGDAFLKRHSNEELHV 824
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A8J9RC70_9CHLO (Probable f-box/LRR-repeat protein 20 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RC70_9CHLO) HSP 1 Score: 140 bits (354), Expect = 1.740e-31 Identity = 116/368 (31.52%), Postives = 172/368 (46.74%), Query Frame = 1
Query: 277 RRETWAKVARARGAHFARPDRKPSPAATARGGSKGRDRGGAVTGRIENDGPKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRG--VLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRST-LRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAV 1368
RR WA AR R AHFA A G + + G + GPWS AR+L++ R AA RE + IA +W+PR R + AG V LF +CL LL E+ D+VE+L + ++ LA + ++T E L+ +E G E++LP+CS++ P + ++L+ C + L L LG CGR GD A+V AG L L L G YR TDA + KLLA +P L +P SR+ S + + V L L +C ++L+ L + L+ L L+G ++TDD+L + AL LR L +++C VTD ++ +
Sbjct: 78 RRAGWAAAARRRAAHFAH---------YANADESGEE------DNLHTGGNEARTLGPWSSARQLVEGRAAAAAARE----DKIAXXXXXXXXXX----------XXXDWRPR-RDAPAGPRPAPRVGKLFGMCLALLVEHIDNVETLYGLPTVIKVQLARAVANARRMTPEVLRLFTEDGPDEVVLPECSQLAPAALAEALVPCATPRLERLELGMCGRGFGDAVAAAMVAAGPLSALRCLTLGGAYRTTDADLAKLLAAAPGLVELRLPQCSRLQDASAISRLVPNLEV------LDLTECRGTSTQSLQQCLTSLKSLQVLELNGDTEVTDDLLTEVALAC---PLRRLAVANCSAVTDQGVRGI 406
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A835SZX3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SZX3_9CHLO) HSP 1 Score: 139 bits (349), Expect = 1.250e-30 Identity = 128/424 (30.19%), Postives = 186/424 (43.87%), Query Frame = 1
Query: 292 AKVARARGAHFARPDRKPSPAATARGGSKGRDRGGAVTGRIENDGPKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRG-VLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRS-TLRVLRLGTCGRCIGDTTVEALVTAGGLP--RLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKA--------------VGEC---------------CDVLESFSLGMCPLLTSGAIQELFQYSG 1461
A++AR R AHFA +D G I G + GPWS A L++ REKA R+ A+ + +G + ++G EW+P + R V LF CLD+L D VESL V ++ LA +C K++ EA + + TE+++PDC++++ M D L + +L+ L LG CGR GD +V G P LE L G YRL+DAG++KLL+ +P L + SR + A++D + LT L+L DC LG E+L L R+ L S+ L + ++ D VLV A + L L + C VTD L+A + EC C L+ FS C L A+ EL + G
Sbjct: 2 AQIARKRAAHFA----------------NFQDEGDDADENIHAGGDQARTLGPWSSAMELVNAREKAQHERQ-------AKLQAAAGTE---QEGEAEADAAAEWRPSRDPALGPHPRDPVKPLFGHCLDVLTAYIDCVESLWGVPDAIKVRLAAHVCARRKMSPEAARLFATSAPTEVLVPDCTQLDAPAMADLLREVTGPSLQRLELGFCGRGFGDDAAALVVAVAGGPLAELESLTLDGAYRLSDAGLIKLLSAAPALRRLSLAQGSRFT----SALLDKLPELVPQLTHLNLADCRGLGAESLAAALPRLQQLRSVRLDLIPEVDDGVLVALATKLP--HLTELSLRCCQAVTDAGLRALAASGRGPHLELLRIDECGGRXXXXXXXXXXSQCRALKVFSARRCTKLGDEALAELLRAGG 393
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: I0YSM9_COCSC (RNI-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YSM9_COCSC) HSP 1 Score: 134 bits (336), Expect = 1.430e-29 Identity = 106/338 (31.36%), Postives = 158/338 (46.75%), Query Frame = 1
Query: 445 GPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKS--RGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRST-LRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVLESFSLGMCPLLTSGAIQEL 1446
GPWS AR+L++ R AA RE + IA + +W+PR R G V LF +CL +L E D VE+L + ++ LA + ++T E L+ ++ G E++LP+CS++ P + ++L+ C + L L LG CGR GD A+V G L RL L G YR TDA + KLLA +P L +P SR+ A + L L L +C + ++L+ L + L L L+G ++TDD+L + AL LR L +S+C VTD ++ V L + LT A+ L
Sbjct: 50 GPWSSARQLVEGRAAAAAARE----DKIAAXXXXXXXXE----------AEADWRPR-RDPALGPRVPPRVGKLFSMCLAVLVEYIDDVETLYGMPTMIKVQLARAVADARRMTPEVLRLFTDDGPDEVVLPECSQLMPATLAEALVPCATPRLERLELGLCGRGFGDAVAAAMVAGGQLSRLRSLTLGGAYRTTDADLAKLLAAAPDLAELRLPQCSRLQDACAIARLTPN------LEMLDLTECRGISVQSLQQCLTSLKSLRVLELNGDTEVTDDLLTEVALAC---PLRRLGVSNCSAVTDRGVRGVAAAAPQLTALIADDVGRLTDAALVAL 363
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A835SCW4_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835SCW4_VANPL) HSP 1 Score: 135 bits (341), Expect = 2.260e-29 Identity = 98/340 (28.82%), Postives = 166/340 (48.82%), Query Frame = 1
Query: 382 RDRGGAVTGRIENDGPKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCR-STLRVLRLGTCGRCIGDTTVEALVTAGG--LPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVL 1389
RD V + N +E WPGP+S A +++ ERE R S++++ + E VK++W P TA + +L LC+++L EN + VESL + +++ L +LC ++++ L + +E+ + DCS Q + QC S L+VL+L CGRC+ D + + + LP L +L G Y L+D G+ ++A +P L ++ S ++ K + + D V L L + DC ++ + P L ++ CLE LS++ + +TD L ++ L A G +R L S C +T+ S+KA+ E C L
Sbjct: 441 RDEESEVEESLPNANEEEDWPGPFSTAMKIIKERESMLKAR-SLKSSLEKDRE-----------------VKVQWTPSNEQKTAKMGKLAPSLKDLCVNVLYENVEEVESLECLPDAIKHKLVNLLCHSRRMSSHVFGLLVKGSPSEICISDCSWATDKQFEELFSQCNISNLKVLQLNLCGRCLPDYVLHSTLAKAPNCLPSLSRLSLKGAYGLSDGGLAAIIASAPWLQSVDLSQCSLLTHKGITYLADKLEAV---LKELYIADCQNVDAMLILPALQKVKCLEVLSVACMESVTDKFL-KKLLPASGSNMRELTFSGCCKLTNASMKAIAENCPQL 758
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A835S3I5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S3I5_VANPL) HSP 1 Score: 134 bits (336), Expect = 9.950e-29 Identity = 98/340 (28.82%), Postives = 166/340 (48.82%), Query Frame = 1
Query: 382 RDRGGAVTGRIENDGPKESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCR-STLRVLRLGTCGRCIGDTTVEALVTAGG--LPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVL 1389
RD V + N +E WPGP+S A +++ ERE R S++++ + E VK++W P TA + +L LC+++L EN + VESL + +++ L +LC ++++ L + +E+ + DCS Q + QC S L+VL+L CGRC+ D + + + LP L +L G Y L+D G+ ++A +P L ++ S ++ K + + D V L L + DC ++ + P L ++ CLE LS++ + +TD L ++ L A G +R L S C +T+ S+KA+ E C L
Sbjct: 325 RDEESEVEESLPNANEEEDWPGPFSTAMKIIKERESMLKAR-SLKSSLEKDRE-----------------VKIQWTPSNEQKTAKIGKLAPSLKDLCVNVLYENVEEVESLECLPDAIKHKLVNLLCHSRRMSSHVFGLLVKGSPSEICIIDCSWATDKQFEELFSQCNISNLKVLQLNLCGRCLPDYVLHSTLAKAPNCLPSLSRLSLKGAYGLSDGGLAAIIASAPWLQSVDLSQCSLLTHKGITYLADKLEAV---LKELYIADCQNVDAMLILPALQKVKCLEVLSVACMESVTDKFL-KKLLPASGSNMRELIFSGCCKLTNASMKAIAENCPQL 642
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A200Q8S6_9MAGN (Leucine-rich repeat n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200Q8S6_9MAGN) HSP 1 Score: 134 bits (336), Expect = 1.320e-28 Identity = 105/336 (31.25%), Postives = 164/336 (48.81%), Query Frame = 1
Query: 433 ESWPGPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGKSRG---VLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCR-STLRVLRLGTCGRCIGDTTVEALV--TAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAVGECCDVLESFSLGMCPL 1419
E WPGP+S A +++ +R A +R + + G P +EW P G GK R V L +C+++LA+N + + SL DV +R+ L +LC ++ + ++ L TE+ + DCS++ +Q L C S+L VL+L CGRC+ D + A + + LP L +L G RLTD G+ L+A +P L + S +S + + D P+GS L L L DC ++ + P L ++ LE LSL+ + + DD V + + G KL+ L +DC +TD SLKA+ E C G+C L
Sbjct: 468 EDWPGPFSTAMKIIKDR--AMKHNAPLRNSTL---------------GASKPAPVIEWMPSGE---PGKKRFRPLVPLLQDMCMNILAKNVEAIVSLKDVPDVMRHKLCQLLCDSRRMDSHFMELLVSGSPTEIRVKDCSQLTEEQFTKILEGCDISSLMVLQLDLCGRCLPDYILRATLARSPNSLPALSSISLRGACRLTDVGLKALVASAPSLXXXNLGQCSLLSSTGINTLAD---PLGSVLRELYLDDCQNIDMMLILPALKKLEHLEVLSLADIPTVCDD-FVCKFVTVCGPKLKELVFADCRKLTDTSLKAIAENCS-------GLCAL 772
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A8J4AQ15_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AQ15_9CHLO) HSP 1 Score: 128 bits (321), Expect = 4.500e-28 Identity = 104/312 (33.33%), Postives = 154/312 (49.36%), Query Frame = 1
Query: 445 GPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGK--SRGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRST-LRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAV 1368
GPWS A L++ REKA R++ + +GI A E + +DE EW+PR R + G V +LF CLD+L D VESL + ++ LA +C K++ E ++ + TE+ LPDC++++ +R+ + Q + L+ L LG CGR GD + G L LE+ AL G YRL+DAG+ K L+ +P LT +P +S L L+L DC +G ++L L RM+ L +L L + ++ D VLV +LR L I C VTD L A+
Sbjct: 73 GPWSSAMELVNAREKAQHDRQA-KLHGIKGATEE--EHLEDE---------AEWQPR-RDPSLGPHPQETVRSLFDTCLDVLTTYVDCVESLWGIPDVIKVRLATSVCSRRKMSPEVVRLFTVGSPTEMQLPDCTQLDSVVLREIVQQVATERLQRLELGFCGRGFGDEAAALMAAGGPLRGLEVLALEGAYRLSDAGLEKALSATPSLTWLAVPQSSXXXXX----XXXXXXXXXXGLVHLNLADCRGIGADSLVAVLPRMSALTTLKLDFIPEVDDAVLVAVGSLK---ELRELSIRCCQTVTDAGLTAL 364
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Match: A0A8J4ET54_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ET54_9CHLO) HSP 1 Score: 128 bits (321), Expect = 1.980e-27 Identity = 104/312 (33.33%), Postives = 154/312 (49.36%), Query Frame = 1
Query: 445 GPWSEARRLMDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRGSTAGK--SRGVLTLFRLCLDLLAENFDHVESLGDVSAEVRNHLAGVLCRELKLTTEALQRLSEPGVTELILPDCSRIEPDQMRDSLLQCRST-LRVLRLGTCGRCIGDTTVEALVTAGGLPRLEIAALSGTYRLTDAGVLKLLACSPRLTGFEIPSNSRISRKSLEAMVDAERPVGSALTSLSLMDCIHLGPEALEP-LGRMACLESLSLSGVAKLTDDVLVQQALRAHGWKLRHLDISDCPLVTDVSLKAV 1368
GPWS A L++ REKA R++ + +GI A E + +DE EW+PR R + G V +LF CLD+L D VESL + ++ LA +C K++ E ++ + TE+ LPDC++++ +R+ + Q + L+ L LG CGR GD + G L LE+ AL G YRL+DAG+ K L+ +P LT +P +S L L+L DC +G ++L L RM+ L +L L + ++ D VLV +LR L I C VTD L A+
Sbjct: 73 GPWSSAMELVNAREKAQHDRQA-KLHGIKGATEE--EHLEDE---------AEWQPR-RDPSLGPHPQETVRSLFDTCLDVLTTYVDCVESLWGIPDVIKVRLATSVCSRRKMSPEVVRLFTVGSPTEMQLPDCTQLDSVVLREIVQQVATERLQRLELGFCGRGFGDEAAALMAAGGPLRGLEVLALEGAYRLSDAGLEKALSATPSLTWLAVPQSSXXXXX----XXXXXXXXXXGLVHLNLADCRGIGADSLVAVLPRMSALTTLKLDFIPEVDDAVLVAVGSLK---ELRELSIRCCQTVTDAGLTAL 364 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig66.17565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig66.17565.1 >prot_F-serratus_M_contig66.17565.1 ID=prot_F-serratus_M_contig66.17565.1|Name=mRNA_F-serratus_M_contig66.17565.1|organism=Fucus serratus male|type=polypeptide|length=544bp MDEREKAATRRESIRTNGIAEAEEGSGDDSDDEQGRHPPTVKLEWKPRGRback to top mRNA from alignment at F-serratus_M_contig66:155830..162309- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig66.17565.1 ID=mRNA_F-serratus_M_contig66.17565.1|Name=mRNA_F-serratus_M_contig66.17565.1|organism=Fucus serratus male|type=mRNA|length=6480bp|location=Sequence derived from alignment at F-serratus_M_contig66:155830..162309- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig66:155830..162309- >mRNA_F-serratus_M_contig66.17565.1 ID=mRNA_F-serratus_M_contig66.17565.1|Name=mRNA_F-serratus_M_contig66.17565.1|organism=Fucus serratus male|type=CDS|length=3264bp|location=Sequence derived from alignment at F-serratus_M_contig66:155830..162309- (Fucus serratus male)back to top |