mRNA_F-serratus_M_contig66.17564.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 8.340e-138 Identity = 219/427 (51.29%), Postives = 284/427 (66.51%), Query Frame = 3
Query: 147 RPNEYKKWRTN--PKMVLFSDSTGDSGRRLNAPASFSFE--GIGAFPWLKLFSANDTDEKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFPTGTLEEQIDRYFNDIVNGGN---NETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDPVPYNQVFEI--VDGTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDLVLAGVAEAFDEVAVAIGAAIEEL-ANTNPQLRLIDVYTLFAAIVDDPSVFEKLGFSGADGASEDNPVPLGIPCLQFQFASDSTSEIMGTQALRAESCQEECALCADTTSPCQNCYAGNPSATICDDPDSRILWDIRHPTTAFHLILAEAIRQCSKDQPNGERPFVEILCPD 1397
RPNE+KKWR PKMV+F DS D+GRR NAPASF FE GIG FPW +L+ D+DEK AY+P G+ +NGK W WLRIP+E NFATSSG+ T ++RSR+ CTGYTGEGEDFPT TLEEQIDRYF +IV+ + +ETLDYTH+I +G N++ AI+RY + G YEDPV +++VFE+ G P ++ L ++ P+I V+ A GI RL+ GVTGRIL+AN+ S +GL + A D+VA+ + + E L A Q+R++D+YTLFAA+VDD S+F LGF+ +G+ L C+QF F D +EIMGTQALR CQEEC LCAD+T+PC C+ P+ T CDDP S++ +D H TT FHLI EAIRQCSKD PN +RPFV ++CP+
Sbjct: 30 RPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSI----------GGEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGFTPGEGSL------LADSCIQFNFFVDDAAEIMGTQALRNPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPE 440
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 1.330e-135 Identity = 214/427 (50.12%), Postives = 282/427 (66.04%), Query Frame = 3
Query: 147 RPNEYKKWRTN--PKMVLFSDSTGDSGRRLNAPASFSFE--GIGAFPWLKLFSANDTDEKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFPTGTLEEQIDRYFNDIVNGGN---NETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDPVPYNQVFEI--VDGTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDLVLAGVAEAFDEVAVAIGAAIEELANTNP-QLRLIDVYTLFAAIVDDPSVFEKLGFSGADGASEDNPVPLGIPCLQFQFASDSTSEIMGTQALRAESCQEECALCADTTSPCQNCYAGNPSATICDDPDSRILWDIRHPTTAFHLILAEAIRQCSKDQPNGERPFVEILCPD 1397
RPNE+KKWR P+MV+ DS D+GRR N PASF FE GIG FPW +++ D+DEK AY+P G+ TNGKVW WLRIP+E NFATSS T T ++RSR+ CTGYTGEGEDFPT TLEEQIDRYF +IV+ + N+TLDYTH+I +G N++ A++RY + G Y+DPV +++VFE+ G P ++ L ++TP+I V+ A GI RL+ GVTGRIL+AN+ S +GL + A D++ + + + E L + Q+R++D+YTLFAA+VDD S+F LGF+ +G+ L C+QF F D +EIMGTQALR CQEECALCAD+T+PC C P+ T CDDP ++I +D H TT FHL+L EAIRQCSKD PN +R FV +LCP+
Sbjct: 24 RPNEFKKWRFENPPQMVVLGDSNSDTGRRFNTPASFQFEDEGIGPFPWKRVYDGPDSDEKTAAYMPFEGSVTNGKVWPTWLRIPDEHNFATSSATATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSI----------GGEGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGLDGIAGTETATVLDQITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGFTPGEGSL------LAETCIQFNFVVDDAAEIMGTQALRNPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLCPE 434
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI) HSP 1 Score: 405 bits (1042), Expect = 3.460e-133 Identity = 219/440 (49.77%), Postives = 283/440 (64.32%), Query Frame = 3
Query: 99 VVGSTSSSDEDGVVYQRPNEYKKWRTN--PKMVLFSDSTGDSGRRLNAPASFSF--EGIGAFPWLKLFSANDTDEKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFPTGTLEEQIDRYFNDIVNGGNNETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDPVPYNQVFEI--VDGTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDLVLAGVAEAFDEVAVAIGAAIEEL-ANTNPQLRLIDVYTLFAAIVDDPSVFEKLGFSGADGASEDNPVPLGIPCLQFQFASDSTSEIMGTQALRAESCQEECALCADTTSPCQNCYAGNPSATICDDPDSRILWDIRHPTTAFHLILAEAIRQCSKDQPNGERPFVEILCPD 1397
V+ +S+ GV RPN++KKWR PKMV+F DS D+GRR NAP SF +GIGAFPW +L+ D+DEK AY+P G+ +NGK W WLRIP+E NFATSS + T ++RSR+ CTGYTGEGEDFPT TLEEQIDRYF +IVN +ETLDYTH+I +G N++ AI+RY G YEDPV + +VFE+ G P +A L ++ P+I V+ A GI RL+ GVTGRIL+AN+ S +GL + A D VA A+ + L A + Q+R++D+YTLFAA+VDD S+F LGF+ +G+ L C+Q F D +EIMGTQALR CQEEC LCAD+T+PC C P+ T CDDP +++ +D H TT FHLI EAIRQCSKD PN +RPFV ++CP+
Sbjct: 11 VLLGAASARASGVA-TRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPNSFQLKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVNE-TDETLDYTHVIFIGTNELNRVVEAITRYST----------GGEGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDESIFTDLGFTPGEGSL------LADSCIQVNFFVDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPE 432
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI) HSP 1 Score: 400 bits (1029), Expect = 7.860e-132 Identity = 211/429 (49.18%), Postives = 277/429 (64.57%), Query Frame = 3
Query: 114 SSSDEDGVVYQRPNEYKKWRTNPKMVLFSDSTGDSGRRLNAPASFSFEGIGAFPWLKLFSANDTDEKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFPTGTLEEQIDRYFNDIVNGGNNETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDP-VPYNQVFEIVD-GTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDLVLAGVAEAFDEVAVAIGAAIEELANTNP-QLRLIDVYTLFAAIVDDPSVFEKLGFSGADGASEDNPVPLGIPCLQFQFASDSTSEIMGTQALRAESCQEECALCADTTSPCQNCYAGNPSATICDDPDSRILWDIRHPTTAFHLILAEAIRQCSKDQPNGERPFVEILC 1391
++ +EDG RP YKKWRTNPKMV+F DS D+GRR NAPAS+ FEGIG +PW KL+ A D++ KFRA+LP G+ TNGK+W +WL +P+ELNFAT++ + T ++R+R++C GYTGEGED PTGTL+EQI RYFND +ET DYTHII +G D+ A +RY + G Y DP VP++ +F++ D GT V+ ++ +I + + +GI RL+ GVTG IL+ NI + GL + + E +A+ I A + +A+ P Q+R++D YTLF+AIVD P +FE LGF +G+ L PCL FA D E+ GTQALR CQEECALCAD TSPC C+ GNPS +C DPDSR+ W R+ +TAFH IL EAIRQCSKD PN +RP V LC
Sbjct: 26 AAQEEDGRS-TRPLPYKKWRTNPKMVVFGDSQSDTGRRYNAPASYVFEGIGVYPWPKLYEAPDSESKFRAFLPGAGSMTNGKMWPEWLNVPQELNFATATASATETFRTRENCEGYTGEGEDLPTGTLDEQITRYFND---ADLHETADYTHIIYIGNEDLNSHSAATARYSI----------GGEGYVDPYVPFDMLFDVADDGT--------VTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSSYIGTPLGEIVRSIALTIRAEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSF------LSDPCLDLDFAVDYLGEVAGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELC 426
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: D8LHV8_ECTSI (GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV8_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.810e-62 Identity = 145/433 (33.49%), Postives = 220/433 (50.81%), Query Frame = 3
Query: 183 KMVLFSDSTGDSGRRLNAPASFSFEGIGAFPWLKLFSANDTDEKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFP--TGTLEEQIDRYFND--IVNGGNNETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDPVPYNQVFEIVDGTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDL----VLAGV--AEAFDEVAVAIGAAIEELANT-----NPQLRLIDVYTLFAAIVDDPSVFEKLGFSGADGASEDNPVPLGIPCLQFQFASDSTSEIMGTQA--LRAE-----SCQ-----EECALCADTTSPCQNCYAGNPSATICDDPDSRILWDIRHPTTAFHLILAEAIRQCSKDQPNGERPFVEILCPDV 1400
K+++F DS D+GRR +AP + F IG +PW K++ D D + + G TNGKVWA +L IP N+AT SGT T ++RS+Q CTGYT + + TGTL EQ+ +Y D + +G + +YTH I +G ND+ A+ R L + L +Y +PV + + ++ ++ GV + + L+ GVTGRILV N S G+ V G+ AE +D+ + ++ + Q+R++D+Y+L + V D +F + GF + + CL + F DS+++IMG+QA LR + C +EC LC D SPCQNC P+ ++CD PD I WD H T AF+ + A A+ +CSKD+ +G +P+V LCP V
Sbjct: 81 KIIVFGDSNSDAGRRFDAPNVYPFSDIGVYPWEKVY---DADGEGMVDVYHEGTNTNGKVWAQYLNIPNVQNYATGSGTATDTFRSQQLCTGYTTKADKASRRTGTLGEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDVSNVAEAMQRTALAEYL-------GVTYTEPVSVDDM------------------NFVTMMQGVTDDIVAAVATLIEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDLKLSALSSAGEDQVRVLDLYSLIDSSVHDRDIFNEEGFKTSSTPEQ---------CLTYNFHVDSSTDIMGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDELDGSQPWVGKLCPAV 476
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Match: A0A6H5KTW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW7_9PHAE) HSP 1 Score: 114 bits (285), Expect = 6.870e-25 Identity = 81/243 (33.33%), Postives = 113/243 (46.50%), Query Frame = 3
Query: 186 MVLFSDSTGDSGRRLNAPASFSF--EGIGAFPWLKLFSANDTD-----EKFRAYLPSPGAPTNGKVWADWLRIPEELNFATSSGTMTASYRSRQSCTGYTGEGEDFPTGTLEEQIDRYFNDIVNGGNNETLDYTHIIVLGANDIGEFFGAISRYQLGQALQEQGAFGNSSYEDPVPYNQVFEI--VDGTPQINAELLVSVSYTPVIYGVVTALSTGIQRLLAKGVTGRILVANIISFRGLLDL 887
MV+F DS D+G R N P+SF F +GIGAFPW +L+ D D EK AY+P + +NG W WLRIP D L E + +F +DYTH+ +GAN++ AI+RY G SY+DPV + +VFE+ G P ++ L ++ P+I V+ A I RL+ G+TGRI +AN+ S +GL L
Sbjct: 1 MVVFGDSNSDTGSRFNTPSSFQFKDDGIGAFPWKRLYDGPDRDVSDCVEKTSAYMPFDNSASNGIAWPTWLRIP------------------------------DVGGAPLVETL--FFVACCKLLFTLAVDYTHVAFIGANEMNRVIEAITRYST----------GGQSYQDPVAFEKVFEVDATTGFPVLHESSLPVPTFAPIIEEVLGAWDEVIGRLIGAGITGRIHLANVGSPKGLAAL 201 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig66.17564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig66.17564.1 >prot_F-serratus_M_contig66.17564.1 ID=prot_F-serratus_M_contig66.17564.1|Name=mRNA_F-serratus_M_contig66.17564.1|organism=Fucus serratus male|type=polypeptide|length=454bp MKSKSQLPTTWLILFFINTVVGSTSSSDEDGVVYQRPNEYKKWRTNPKMVback to top mRNA from alignment at F-serratus_M_contig66:8184..38092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig66.17564.1 ID=mRNA_F-serratus_M_contig66.17564.1|Name=mRNA_F-serratus_M_contig66.17564.1|organism=Fucus serratus male|type=mRNA|length=29909bp|location=Sequence derived from alignment at F-serratus_M_contig66:8184..38092+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig66:8184..38092+ >mRNA_F-serratus_M_contig66.17564.1 ID=mRNA_F-serratus_M_contig66.17564.1|Name=mRNA_F-serratus_M_contig66.17564.1|organism=Fucus serratus male|type=CDS|length=2724bp|location=Sequence derived from alignment at F-serratus_M_contig66:8184..38092+ (Fucus serratus male)back to top |