mRNA_F-serratus_M_contig657.17540.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5JVM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM1_9PHAE) HSP 1 Score: 265 bits (676), Expect = 8.110e-86 Identity = 140/205 (68.29%), Postives = 161/205 (78.54%), Query Frame = 3
Query: 93 ATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCTDGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGE 707
A+ ADPLVAGEAID ++LA NN KKRKYP PGFAV+R G RGSY+N FKVKAA FT+ LC DGKPVGN GAAKVLGV KKRI+ WVK E KLKG+I KP+LS AKSL+ GVAASTAD+DQ LEDYINE+RKQH GCG+ EVMNKLLE+K ALGGL T T ++ +F+ KFN WY+RFR RRG SIR+ RTSVG+
Sbjct: 22 ASAADPLVAGEAID-KLLAANN------KKRKYPEPGFAVDRSGAVGGRGSYSNAFKVKAAEFTRALCEDGKPVGNTGAAKVLGVSKKRIIAWVKEEGKLKGLIQAKPKLSKAKSLNVGVAASTADVDQALEDYINEKRKQHRGCGNAEVMNKLLEIKADALGGLGPTATTEEALQFRNKFNGWYKRFRARRGHSIRR-RTSVGQ 218
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 249 bits (636), Expect = 1.490e-75 Identity = 132/213 (61.97%), Postives = 160/213 (75.12%), Query Frame = 3
Query: 87 AMATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCTDGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKLLPTG 725
A+ ADPL AGEAIDE +LA N+ +P H KKRKYP FA ER G ++GSY RFK+KA AFT+VLC DG+PVGN GAAKVL VD++RI+TWV E +K ++ KP+LS AKS+HAGVA TA+++Q LEDYINEQR++H GCGS EVMNKLLELKP ALGGL + ++ F+ KF NWY RFR R G SIR+ RTSVG+KL PTG
Sbjct: 25 AVPALADPLAAGEAIDE-MLAANDPTPSHHKKRKYPESDFAKERTGG--KKGSYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRR-RTSVGQKL-PTG 232
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5J636_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J636_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.360e-68 Identity = 110/188 (58.51%), Postives = 141/188 (75.00%), Query Frame = 3
Query: 141 VLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCTDGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVG 704
+LA N+ +P H KKRK+P P FA ER G ++GSY+ RFK+KAA FT+VLC DG+PVGN GAA VLGVD++RI+TWV E +K ++ KP+LS AKS+HAG+A TA+++Q LEDYINEQR++H GCGS EVMNKLLELKP ALGGL + ++ + KF WY RFR RRGFSIR++ + G
Sbjct: 1 MLAANDPTPSHHKKRKHPEPDFANERTGG--KKGSYSMRFKLKAATFTRVLCEDGQPVGNSGAANVLGVDRRRIITWVGEEATMKKLVKEKPKLSKAKSIHAGMAPMTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLASRTKFKTWYHRFRERRGFSIRRRTSPTG 186
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.660e-66 Identity = 120/216 (55.56%), Postives = 155/216 (71.76%), Query Frame = 3
Query: 72 SADRGAMATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADI-DQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
S+D+GA AT DP GEAIDE +LA N+ KR YP P F +ER G +GSY RFK+KAAA+T+ +C DG+PVGN+G AKVL V +KRI+ W+K EE+L+ ++ P+LS AK + +G AST D +Q L DYINEQRKQH GCG++EV+NKLL+LKP ALGG+ P++ FK KFN+WYQ+FR+R GFSIR+ RTSVG+KL
Sbjct: 31 SSDQGAAAT--DPKATGEAIDE-MLAANDPVESSNGKRAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQPVGNNGGAKVLQVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVPSGGKASTVDAAEQALVDYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRR-RTSVGQKL 242
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.020e-65 Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 3
Query: 72 SADRGAMATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
SAD+GA A ADP GEAIDE +LA N+ KR YP P F +ER G E +GSY RFK+ AA +T+ +C DG+PVGN+GAA VL V KRI+ W+K EE+L+ ++ P+LS AK +H+G AST D +Q L DY+NEQRKQH CG++EVMNKLLELKP ALGG++ P++ FK KFN+WYQRFR+R GFSIR+ RTSVG+KL
Sbjct: 28 SADQGAAA--ADPKATGEAIDE-MLAANDPVKNSNGKRAYPEPNFPIERSGAVEGKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRR-RTSVGQKL 238
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5KI61_9PHAE (BrkDBD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI61_9PHAE) HSP 1 Score: 213 bits (541), Expect = 2.470e-64 Identity = 111/196 (56.63%), Postives = 143/196 (72.96%), Query Frame = 3
Query: 141 VLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKLLPTG 725
+LA N+ KR YP P F ++R GP +GSY RFK+ AAA+T+ +C DG+PVGN+GAAKVL V +KRI+ W+K EE+L+ ++ P+L AK +H+G AST D +Q+L D+INEQRKQH GCG++EVMNKLLELKP ALGG+A P++ FK KFN+WYQRFR+R GFSIR+ R SVGEKL P G
Sbjct: 74 MLAANDPVKNSNGKRAYPEPHFPIKRSGPVGGKGSYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRIIEWLKQEEQLREKVSANPKLWKAKQVHSGGKASTVDAEQSLVDHINEQRKQHRGCGNREVMNKLLELKPDALGGMAANAKPEEALAFKVKFNSWYQRFRKRNGFSIRR-RVSVGEKL-PNG 267
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.470e-58 Identity = 103/175 (58.86%), Postives = 130/175 (74.29%), Query Frame = 3
Query: 192 PNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
P P F +ER G +GSY RFK+ AAA+T+ +C DG+PVGN+GAAKVL V +KRI+ W+K EE+L+ ++ P+LS AK +H+G AST D +Q L DYINEQRKQH GCG++EVMNKLLELKP ALGG+ P++ FK FN WYQRFR+R GFSIR+ RTSVG+KL
Sbjct: 6 PEPNFPIERSGAVGGKGSYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQVLVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRR-RTSVGQKL 179
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 204 bits (520), Expect = 3.740e-58 Identity = 105/192 (54.69%), Postives = 137/192 (71.35%), Query Frame = 3
Query: 141 VLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
+LA N+ + KR YP P F +ER G +GSY RFK+ AA +T+ +C DG+PVGN+GAAK+L V KRI+ W+K EE+L+ ++ P+LS AK + +G AST D +Q L DYINEQRKQH GCG++EV +KLLELKP ALGG+ P++ FK KFN+WYQRFR+R GFSIR+ RTSVG+KL
Sbjct: 1 MLAANDPVKNSSGKRAYPEPNFPIERSGAVGGKGSYPIRFKLNAAVYTREICPYDGQPVGNNGAAKLLQVPGKRIIEWLKQEEQLREKVSANPKLSKAKQVQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRR-RTSVGQKL 191
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE) HSP 1 Score: 195 bits (495), Expect = 5.380e-57 Identity = 112/215 (52.09%), Postives = 140/215 (65.12%), Query Frame = 3
Query: 72 SADRGAMATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCT-DGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
SAD+GA A ADP GEAIDE +LA N+ KR YP P F +ER G +GSY RFK+KAAA+T+ +C DG+P RI+ W+K EE+LK ++ P+ S AK +H+G AST +Q L DYI EQRKQH GCG++EVMNKLLELKP ALGG+ P++ FK KFN+WYQRFR+R GFSIR+ RTSV +KL
Sbjct: 28 SADQGAAA--ADPKATGEAIDE-MLAANDPVKNSNGKRAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQP---------------RIIEWLKQEEQLKEKVSANPKFSKAKQVHSGGKASTVHAEQALVDYIKEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRR-RTSVRQKL 223
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.870e-55 Identity = 108/202 (53.47%), Postives = 135/202 (66.83%), Query Frame = 3
Query: 108 PLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRGSYTNRFKVKAAAFTKVLCTDGKPVGNHGAAKVLGVDKKRIVTWVKGEEKLKGMIAIKPELSSAKSLHAGVAASTADIDQTLEDYINEQRKQHHGCGSKEVMNKLLELKPQALGGLADTDTPDDEEEFKKKFNNWYQRFRRRRGFSIRQQRTSVGEKL 713
P +GEAIDE + A + S KKRKYP PGF E G ++ Y FK+K AFT+V+C DGKP GN GAAKVL V ++RIV WV+ EE L+ ++ P+LS AK +HA AS ADI++ L ++IN+QRK H GCGS MNKLLELKP ALGGLA P++ KF +WYQRF +R FSIR+ RTSVG+KL
Sbjct: 14 PKASGEAIDEMLAAKDPGS----KKRKYPEPGFPSETSGAVGKKRGYPVGFKLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRR-RTSVGQKL 210 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig657.17540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig657.17540.1 >prot_F-serratus_M_contig657.17540.1 ID=prot_F-serratus_M_contig657.17540.1|Name=mRNA_F-serratus_M_contig657.17540.1|organism=Fucus serratus male|type=polypeptide|length=222bp MATTADPLVAGEAIDEQVLATNNDSPEHAKKRKYPNPGFAVERFGPTERRback to top mRNA from alignment at F-serratus_M_contig657:217152..217925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig657.17540.1 ID=mRNA_F-serratus_M_contig657.17540.1|Name=mRNA_F-serratus_M_contig657.17540.1|organism=Fucus serratus male|type=mRNA|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig657:217152..217925+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig657:217152..217925+ >mRNA_F-serratus_M_contig657.17540.1 ID=mRNA_F-serratus_M_contig657.17540.1|Name=mRNA_F-serratus_M_contig657.17540.1|organism=Fucus serratus male|type=CDS|length=1332bp|location=Sequence derived from alignment at F-serratus_M_contig657:217152..217925+ (Fucus serratus male)back to top |