mRNA_F-serratus_M_contig656.17523.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig656.17523.1
Unique NamemRNA_F-serratus_M_contig656.17523.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: D8LMS2_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS2_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.350e-123
Identity = 183/220 (83.18%), Postives = 204/220 (92.73%), Query Frame = 1 
Query:  157 LFAATIALRGRASASSNPLELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            +  AT+ALRG   ASSNPLELNGGSCLAMAGK CVA+AVDRRFG EGQLVS EAKRVLK+NGQLLCGFTGLWTDV+TVMQD+S EVALK+ AE +RP +PAAL+GLLSTLLY+RRGSP+FVEPI+AG+D RG+P+LCGQDILGA V+ DDFVVAGTSAQSLYGTCEAFFR GM+REELFRVA+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:    1 MLVATVALRGGVLASSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 220
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A835YVV6_9STRA (Proteasome beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.480e-66
Identity = 120/211 (56.87%), Postives = 151/211 (71.56%), Query Frame = 1 
Query:  175 ALRGRASASS-NPLELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADD-FVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETREL 801
            AL G A A   +PLELNGGSCL MAG+ C+AVAVD+RFG+  +LVS  A+RVLK++ +LLC FTGL TDV T+MQD++   A     E  RP  PAA + LLS++LYARR SP+F E I+AG+    + F+   D+LGA   A+D F V GTSA+SLYG CEAF+R  M  EEL   A  CL++ALERDCLSG+G VVHL+T+ GI +REL
Sbjct:   21 ALVGAALAQQQSPLELNGGSCLVMAGRKCLAVAVDKRFGKGNELVSDNARRVLKLHSRLLCAFTGLTTDVQTLMQDLAAAAASYTITEG-RPLQPAAAAALLSSMLYARRRSPYFCETIVAGLTRSAEAFVRSHDVLGAAGGAEDGFAVMGTSAESLYGLCEAFYRPDMTPEELADTAEHCLVAALERDCLSGHGVVVHLLTEQGISSREL 230
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: R7QTK3_CHOCR (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTK3_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 2.880e-60
Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 1 
Query:  211 LELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            LE NGG  +AMAGKDCVA+A D R G +   V+ +A R+  ++ +L  G TGL TD+ T+ Q   F + +    EN R   P   S L+S+ LY +R  P+F EP+IAG+D   KPFLC  D+LG   +ADDF VAGT A+SL GTCE F+R  ++ E+LF   ++ LL+AL+RDC+SG+GAVVH+IT+DG+ TREL  RMD
Sbjct:    4 LEYNGGCVIAMAGKDCVAIASDHRLGVQLTTVAMDATRIFPMHDKLYLGLTGLMTDITTLDQLFRFRLEMYEMREN-RKIKPKTFSNLVSSTLYGKRFGPYFSEPVIAGLDKDNKPFLCSMDLLGCIAEADDFAVAGTCAESLLGTCETFYRPNLEPEDLFETVSQSLLAALDRDCISGWGAVVHIITKDGVTTRELDGRMD 204
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: M1V7D3_CYAM1 (20S core proteasome subunit beta 3 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V7D3_CYAM1)

HSP 1 Score: 205 bits (522), Expect = 1.730e-59
Identity = 98/204 (48.04%), Postives = 137/204 (67.16%), Query Frame = 1 
Query:  205 NPLELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            NPL  NGG+  A  G  CVA+A DRRFGQ    ++ +A R+ +++ +L+ G TGL TD +T+ + V     L    E   P  PA +S L+S LLY RR +P+FVEP+I G+    KP+ C  D+LG  ++ D+FV AGT A+SLYGT E F+R G+D E+LF V A+C+L+AL+RDCLSG+GAVV+++  +G+  REL  RMD
Sbjct:    5 NPLHYNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTLAERVRMRTNLYRLGEKREP-KPATISALVSALLYERRFAPYFVEPVIVGLSGDNKPYCCSMDLLGTPMETDEFVAAGTCAESLYGTGETFWRPGLDPEDLFEVTAQCMLAALDRDCLSGWGAVVYVLHSEGVTVRELKARMD 207
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BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A2V3J6M2_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR)

HSP 1 Score: 205 bits (521), Expect = 2.200e-59
Identity = 97/202 (48.02%), Postives = 144/202 (71.29%), Query Frame = 1 
Query:  211 LELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            LE NGG  LAMAGK+CVA+A D+R G +   V+ +A R+ +++ +L  G TGL TD+ T+ Q   F++ L A  EN R   P   + L+S+ LY++R +P+F EP+IAG+D   KP++C  D+LG   +  +FVVAGT A+SL+GTCE F++  ++ +ELF   ++ LL+AL+RDC+SG+GAVVH+IT+DG++T+EL  RMD
Sbjct:    4 LEYNGGCVLAMAGKECVAIASDKRLGVQLTTVAMDANRIFRMHDKLYLGLTGLMTDIQTLDQLFRFKLELYAMREN-RLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A7J7ICI5_9RHOD (Proteasome subunit beta type-3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICI5_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 4.770e-59
Identity = 97/204 (47.55%), Postives = 141/204 (69.12%), Query Frame = 1 
Query:  205 NPLELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            NPL  NGG+ +A  G +CVA+  DRRFGQ    ++ +A R+++++ +L+ G TGL TD MT+ + V     L   +E   P  PA +S L+S+LLY RR +P+FVEP++ G+ +  +P+ C  D+LG  + +++FV AGT A+SLYGTCE F+R G+D E LF V A+CLL+AL+RDCLSG+GAVV+++   G+  REL  RMD
Sbjct:    5 NPLHYNGGAIVATVGHECVAIGADRRFGQAQLTLACDANRLVRVHDRLVLGLTGLATDCMTLAERVRMRTNLYRLSEKREPR-PATVSALVSSLLYERRFAPYFVEPVLVGLSADNQPYCCSMDLLGTPMVSEEFVAAGTCAESLYGTCETFWRPGLDPEALFEVTAQCLLAALDRDCLSGWGAVVYVLHGQGLTVRELKARMD 207
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A0H5R549_9EUKA (Proteasome subunit beta n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R549_9EUKA)

HSP 1 Score: 204 bits (518), Expect = 6.080e-59
Identity = 95/202 (47.03%), Postives = 138/202 (68.32%), Query Frame = 1 
Query:  211 LELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            +E NG + +AM GKDCVA+A D R+G + Q ++ + ++V K++ +L  G +GL TD+ TV   + F + +    E  R   P   S +LST+LY +R  P+FVEP++AG+D  GKPF+C  D+LGA V ADDFVV+GT+ + LYGTCE+ +   +  +ELF   ++ LL+A +RDCLSG+GAVVH++T+D I TR L TR D
Sbjct:    4 MEYNGSAVVAMLGKDCVAIASDTRYGVQAQTIATDMQKVFKMHDRLYVGLSGLSTDMQTVRNRLEFRLKMYKLREE-REIEPKVFSNMLSTMLYEKRFGPYFVEPVVAGIDKAGKPFICAMDLLGAAVYADDFVVSGTTGEELYGTCESLYSPNLSPDELFETVSQALLAACDRDCLSGWGAVVHILTKDNITTRVLKTRQD 204
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A3P3Y3V5_PLABS (Proteasome subunit beta n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y3V5_PLABS)

HSP 1 Score: 203 bits (517), Expect = 8.530e-59
Identity = 93/202 (46.04%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:  211 LELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            LE NG + +AM GKDCVA+A D R+G + Q V+ + +++ K++ +L  G +GL TD+ TV   + F++ L    E  R   P   + L+ST+LY++R  P+FVEP++AG+D +GKPF+C  D++GA V A+DFVV+GT+++ LYGTCE+ +   +  EELF   ++ LL+A++RDCLSG+GA VH+IT+DG+ +R+L  R D
Sbjct:    4 LEYNGSAIVAMVGKDCVAIASDTRYGVQAQTVATDMEKIFKMHDRLYVGLSGLATDMQTVRNTLQFQLKLYKLREE-REIEPHVFANLVSTMLYSKRFGPYFVEPVVAGIDKKGKPFICAMDLIGAPVFAEDFVVSGTASEELYGTCESLYTPNLGPEELFETVSQALLAAVDRDCLSGWGATVHIITKDGVTSRKLKCRQD 204
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.200e-58
Identity = 99/202 (49.01%), Postives = 138/202 (68.32%), Query Frame = 1 
Query:  211 LELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVLKINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            LE NG + +AMAGKDCV +A D R G + Q V+ + K+V K+N +L CG  GL +DV T+ Q + F   L    E  R  +P   S LLSTLLY +R  P+FVEPI+AG+D++GKPFL G D++GA V  DDFVV+GT   ++YG CE  ++  M+ ++LF   A+ LL++++RD LSG+G VVH+IT+DG+ +REL  R D
Sbjct:    4 LEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREE-REMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204
[Close]
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Match: A0A6H5JNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ3_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.260e-58
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 1 
Query:  391 MQDVSFEVALKAAAENNRPTSPAALSGLLSTLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSAQSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 816
            MQD+S EVALK+ AE +RP +PAAL+GLLSTLLY+RRGSP+FVEPI+AG+D RGKP+LCGQ                    SLYGTCEAFFR GM+REELFRVA+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:    1 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGKPYLCGQ--------------------SLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 122
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS2_ECTSI2.350e-12383.18Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835YVV6_9STRA3.480e-6656.87Proteasome beta subunit n=1 Tax=Tribonema minus Ta... [more]
R7QTK3_CHOCR2.880e-6050.50Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
M1V7D3_CYAM11.730e-5948.0420S core proteasome subunit beta 3 n=2 Tax=cellula... [more]
A0A2V3J6M2_9FLOR2.200e-5948.02Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
A0A7J7ICI5_9RHOD4.770e-5947.55Proteasome subunit beta type-3 n=1 Tax=Cyanidiococ... [more]
A0A0H5R549_9EUKA6.080e-5947.03Proteasome subunit beta n=1 Tax=Spongospora subter... [more]
A0A3P3Y3V5_PLABS8.530e-5946.04Proteasome subunit beta n=2 Tax=Plasmodiophora bra... [more]
A0A7S2XNS4_9STRA1.200e-5849.01Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6H5JNZ3_9PHAE1.260e-5871.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig656contigF-serratus_M_contig656:73459..78298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue2.2e-100
Seed eggNOG ortholog2880.D8LMS2
Preferred namePBC1
KEGG koko:K02735,ko:K03660
KEGG Pathwayko03050,ko03410,map03050,map03410
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0006508,GO:0006511,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010499,GO:0010604,GO:0010950,GO:0010952,GO:0012505,GO:0016020,GO:0016504,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0030162,GO:0030163,GO:0030234,GO:0031090,GO:0031323,GO:0031325,GO:0031597,GO:0031984,GO:0032268,GO:0032270,GO:0032991,GO:0034515,GO:0042175,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0052547,GO:0052548,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0180@2759
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-02_003440.1
EC3.4.25.1,4.2.99.18
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400
Exons4
Model size1661
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig656.17523.1prot_F-serratus_M_contig656.17523.1Fucus serratus malepolypeptideF-serratus_M_contig656 74849..78268 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932015.1626632-UTR-F-serratus_M_contig656:73458..735381622932015.1626632-UTR-F-serratus_M_contig656:73458..73538Fucus serratus maleUTRF-serratus_M_contig656 73459..73538 -
1690964103.4198267-UTR-F-serratus_M_contig656:73458..735381690964103.4198267-UTR-F-serratus_M_contig656:73458..73538Fucus serratus maleUTRF-serratus_M_contig656 73459..73538 -
1622932015.1872463-UTR-F-serratus_M_contig656:74086..748481622932015.1872463-UTR-F-serratus_M_contig656:74086..74848Fucus serratus maleUTRF-serratus_M_contig656 74087..74848 -
1690964103.442896-UTR-F-serratus_M_contig656:74086..748481690964103.442896-UTR-F-serratus_M_contig656:74086..74848Fucus serratus maleUTRF-serratus_M_contig656 74087..74848 -
1622932015.260098-UTR-F-serratus_M_contig656:78268..782981622932015.260098-UTR-F-serratus_M_contig656:78268..78298Fucus serratus maleUTRF-serratus_M_contig656 78269..78298 -
1690964103.4905248-UTR-F-serratus_M_contig656:78268..782981690964103.4905248-UTR-F-serratus_M_contig656:78268..78298Fucus serratus maleUTRF-serratus_M_contig656 78269..78298 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932015.2010424-CDS-F-serratus_M_contig656:74848..750941622932015.2010424-CDS-F-serratus_M_contig656:74848..75094Fucus serratus maleCDSF-serratus_M_contig656 74849..75094 -
1690964103.4553761-CDS-F-serratus_M_contig656:74848..750941690964103.4553761-CDS-F-serratus_M_contig656:74848..75094Fucus serratus maleCDSF-serratus_M_contig656 74849..75094 -
1622932015.220928-CDS-F-serratus_M_contig656:75502..757421622932015.220928-CDS-F-serratus_M_contig656:75502..75742Fucus serratus maleCDSF-serratus_M_contig656 75503..75742 -
1690964103.4668055-CDS-F-serratus_M_contig656:75502..757421690964103.4668055-CDS-F-serratus_M_contig656:75502..75742Fucus serratus maleCDSF-serratus_M_contig656 75503..75742 -
1622932015.242073-CDS-F-serratus_M_contig656:77965..782681622932015.242073-CDS-F-serratus_M_contig656:77965..78268Fucus serratus maleCDSF-serratus_M_contig656 77966..78268 -
1690964103.477764-CDS-F-serratus_M_contig656:77965..782681690964103.477764-CDS-F-serratus_M_contig656:77965..78268Fucus serratus maleCDSF-serratus_M_contig656 77966..78268 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig656.17523.1

>prot_F-serratus_M_contig656.17523.1 ID=prot_F-serratus_M_contig656.17523.1|Name=mRNA_F-serratus_M_contig656.17523.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MEDPVHWKRKRPRRTRKIIPSWIADAPWNYAYPSKLLVNTLILFAATIAL
RGRASASSNPLELNGGSCLAMAGKDCVAVAVDRRFGQEGQLVSAEAKRVL
KINGQLLCGFTGLWTDVMTVMQDVSFEVALKAAAENNRPTSPAALSGLLS
TLLYARRGSPFFVEPIIAGMDSRGKPFLCGQDILGACVKADDFVVAGTSA
QSLYGTCEAFFRAGMDREELFRVAARCLLSALERDCLSGYGAVVHLITQD
GIETRELTTRMD*
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mRNA from alignment at F-serratus_M_contig656:73459..78298-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig656.17523.1 ID=mRNA_F-serratus_M_contig656.17523.1|Name=mRNA_F-serratus_M_contig656.17523.1|organism=Fucus serratus male|type=mRNA|length=4840bp|location=Sequence derived from alignment at F-serratus_M_contig656:73459..78298- (Fucus serratus male)
CCTGCCGTCGTGTTGCTTACTCACAAAAGCATGGAGGATCCTGTCCACTG
GAAGCGAAAAAGACCGCGACGGACACGCAAAATTATTCCTTCCTGGATTG
CCGACGCCCCTTGGAATTATGCCTACCCGAGTAAGCTCCTTGTTAATACC
TTAATCCTTTTCGCGGCAACTATCGCATTGCGAGGACGAGCTTCTGCCTC
CTCCAACCCTCTGGAGCTCAACGGCGGATCTTGCTTGGCTATGGCAGGCA
AGGACTGTGTGGCGGTAGCGGTCGACCGTCGGTTTGGACAGGAAGGACAG
CTGGTATCGGCAGAAGCCAAGCGTGTTTTAAAGGTGAAGTATAATTTTCT
CCATACGTAGTCTTAATAGTCAATGCTTGTATCGCTGACCAACGGTCAAC
GAGTTCATGCGTGTGGTCATTTCCCATCAATGCAGCCCAGCAAGATGGCC
GCTCTCGCTCATTGCACACAAGTGTTCTCCTCATGGAGGGCTATCCTCTT
CATGAATGACTGTTCGAGCTAGTGTCGGCCATAACAGTAATTTCGTCGTA
ATGTAAACACAAGCGTGTACAAAAACGACAGCGCTACGAGTAGGTGATGT
TTCTGCCTTTTCACTTATCAATACGATAGAACTTGTTCACAAGACCCTCA
TGACTTTTTGAGCATGAACTGCTGTACAGGACGTACCGTACACATAGGAC
TTGCAGCCAGTAGTTGGTTTGGTCAAATGACAATCCCATTGGTTCAACAC
TACGTCAACAATGTCGGCGATACCCTACCTTTATGCTCTGTATGTACGCT
TAAACATATCGGCATGTGGGGACACCAATGAATGCAGACAAAGCTCCAGG
TTTAGAGTATCTTCCATCGTATTACTAATAAATCGAAGGACCTTGTATCT
TTATACCCGTAACCGTTCAATATTACTACAGTTTTATAGCTTACTTACAG
TGCTCAAGCTCTACCCTGCTTTTCCTGGACCTCGCGCGGCATAAGATCCA
TCTAGGGTCGCCACGAGCTCCCTCCCCACCGCCATCAGACCAAAGAAAGC
ACTTCTACCGTAGAAGAGAGGAAGCCCATGCTCACGCCTTCCCACAATTT
ACAACGGAGACACGTAAGAGACGAAATCTCTTAACCCTTCTGGCCCTGGG
CTACTCGCCTTCCGACAGACCGGACTGTCATAAAAACTCGCTCCGTTTCA
CAAAAAATAAAGGTCCCAGAAAAAAATAGCGTTTGAGAGACAAGCAGAGG
GAGAGATGTGCACAAAAAAACAAGAAGTACATATATCAAGTCGGTAGCTT
TACAATCTCGACCCAGGGGGCGTGTAGGCGGCCCGCGTCAGGCTGGTGAC
GCCTCTCAGGGTACAAGAAGGGTTGTGGAGTGGTCGTGCTGTCGCAGACA
GAGGTTGTTAGGCGTTCAGCCCTAGATGTTCCATGCATGCTATAACTCTA
TTTTCACAATATTCTCAAATGATCAGTGGAGAGGGTTCAAATGATCAGTG
AGCTCGCTTTGAAGGGCCAGACGAGCAAACTGTACTTCTGTACTTCTCTG
GCCCCGCCCAATGTGATCCCTTCGGACTCACTAGCGCTCCTTATTTTACA
ATATTAGTACAATAGCTAATGTTCCCTAAACGTTTTGATATTTTTTTCCT
CCTGACTGGGGGATGCTCAGAAGGTATAGGCGCGTTCTAGTTTTTCTTTT
TGTACTTGCAGCCTTTGATCTTTGATCCCACCTAAACGTTTTGACAATTT
TTCTCCTGACTGGAGGATGCTCAGAAGGTATAGGCGCGTTTTGGTTTTTC
TTTATACACAAACGAACATGGATTGGCCTCCTCCGTTGGTCCAGGCATTC
TCCCTAAAAGAGTAGTATGCATCCTTTTCCGCGTACTAGGTACATTGCAA
TTGTATAAAGTGGCAAGAGAGGATATATAGCTTGTACGGGTTGTTCTGGC
TCGCAGATGTGGGCTCCACCATTGCTTGTGTACTGTAGAACGGCGCGGTT
GCTGTAATTCGTGTGTACAGTACGCTGAGGTTCGGAGGACGTGATTCGTT
CGTTGCTCGTGTGATATTATACAGGAGTTGTTTTTCATGGTATCGAGGCA
GCAACTTTTGAGCATGCATCCGGGTTCAAAGGTTTTTGTCCCATGTATGG
GTGTGAGGTGCCGGCCCGGGCAATGGACGTGCTAATATGAAATTACTTCC
CTTTTTTGTATTTTCTTGATTTGAGTGTCTTTTGTTGTCCCTCTTTGCAG
GCACACACATCGTTGCTCTGTGGTGCAATACAACTCCTTGCATGTGGAGT
TCGTTTAAAAAAAAATCCCCTACACGATTAGACCAGGCTAAACAAACAAA
AAAACAAAAAAAATGATCAGTAAACACGCGTGAAGGCTCAGAAGGGTCAA
AAGAGCGCTGTATCTAGAAAAGGAAAATGCCTTGCAACGAAACGTTAGAG
ACCATCCTCTCTCGCGCCCTTTTAGCAATAGCTCTAATACTCTTATCAAG
ATTATTAATATTACTTGCTCCAATACTGGTTGGTCTAACTTACACCTAAC
CGTCAGATCAACGGGCAGCTCCTGTGCGGATTCACGGGGCTGTGGACGGA
CGTGATGACGGTGATGCAAGACGTATCGTTTGAAGTGGCCCTCAAGGCCG
CCGCGGAAAACAACCGTCCCACATCCCCGGCAGCGCTGTCGGGGCTTCTC
TCCACCCTGCTCTACGCTCGCCGCGGGAGTCCGTTCTTCGTTGAACCGAT
TATCGCCGGCATGGATTCGAGAGGAAAGCCGTTTTTGTGCGGGCAGGTAT
GGAACGGTCACGTGGTTGGACGTAGGTACATATACCCGACAATGTCTGTT
GTAAGTGCCACCTATGATAGATTGGGAGGGCGTAAATCCCCATTATAGTA
GACTCTCTCCTTCCGATGTAGTGGTCTTCGCGTAGCGTTAGAACACCCCC
AATCGAATAAAACCTGGGGCCTGTGATGCATCCGCTTCCCGTGACGTTGT
TATGATATCATAGCGCTACAACAGTCGATTGGAGCCACAGTATTACTTTC
ACAGATGATAATTCTCGAGCGCGTGTACTACGACTGATAAGTACAACAGT
CGCCATTTACGCAAATCCCACTCGACAACCATCGAAACGAAGGTCCAACC
CCGTGCCACTCCCAGTCACCCCGTTCCCTTCCGTTGACCACACCTTGCCA
CCAGGACATCTTAGGGGCTTGCGTAAAAGCGGACGATTTCGTAGTAGCCG
GGACGTCGGCACAGTCCCTCTACGGCACCTGCGAGGCATTTTTCCGGGCC
GGCATGGACAGGGAGGAGCTGTTCCGAGTGGCGGCGCGGTGCCTCCTGTC
CGCGCTTGAGCGCGATTGTCTGAGTGGCTACGGAGCGGTGGTGCACCTCA
TCACCCAAGACGGGATAGAAACACGCGAGCTGACGACGCGTATGGACTAG
ATCGCTCGGGCCTTGGAACGAGAGGCTGCGAACCTTCGAGCGACATAACT
AATTTTATATTTCCGTGGAAAAAGTGTATCCAGAATCACGGGCGCCTTGG
AACGAAAGGCCCCATGAGGTCGCATTCACGATCACTCGTACAAATGCCCT
GGATATTTAACCACGTGGCATGCTAAGATTGCTGCCCCGGAGCGACGCGA
CTAAAGACTGCATCGTGCACCCTGAAGCGAAATCAAAGGCCACCATCGAG
ACCGAGCTCCCATTGAAGGAAGCGCAACCGTTGAAAATATGGTAGCAGAT
ACATCGTACAAGGACCTCCTGCACAGCGCTTCTCGTGCAAACTCTTCACT
CCGTATACAATAAGGTCGCCCGTCATGAGACGGTCAGCCATCGAGCCTGA
ATATGAGTGTTTTCCCACGACTGGTCTGACTTCTCTAGTCAGCTGTCTGA
ACCGACTACACCTGTGTCTACGGGGGAACTCGTCTAATAAAACAACGCAC
CGCCTTTTTGAACAGCGAGAAAAAACTAAGCGGAGCAAACCCCGATGTAC
GTTACACCAAAGGCGCCCGAAACACGTTCAGGCGCCATGTTCTTTGCTGC
GATCTCGGGACACAACACAGCAGAATCCGACCGACTCTACGCCAAAACCT
TCGAAGATGGATCCGCGCTCTCTCTCATCGCCTCCTCTAACCTCTGACCG
TGACTTCGACAAATTTCGCAAACCATGTCGAGGAGTCCTTTCGTTTCCGC
CACCTGTTGAGCCTGCTCGAGCAATAGAAAGCGAAATCAGCTCCAGAATA
TGAGTGATATGAGTCGACGGCTTGGCTCGATCGATCGATCGCGATTCCGC
GCCCACGACCACGTAATTTTCGGCCGAGAACGCGCGGTATCGCTTCGTTC
ATACGGATTCGATAGTTCTATTTTCTTGCGTAGCCGTTTGAGGAGCCTTT
ATGTTATGCTGTTGCCCCTAATAGGTTGTTCCTACTGTCTGTGATTTTGT
TTGTGTTTCCTATTTTCTTATTTATAGCGACAATGTCTTGGCTGGCTACT
TTCTTGTCCGTTGTCTTCTATATATACTATTTTCCCTGCTTATCTCGGAA
GATATTACAGGTTTTTTTATCTGGTTTGGTTCCGTCTATCTTGTGACCAC
GGCTGGATTCGTAGCGGATCAGTTAATGTGAGATAAACAACAACAACTCG
TCTGTTGAGAGCTTCAGGTTTGAAAATAACACCGTCTTGCCGAGATCACG
CCGTGTGAAGTGGTGTACGCACACACACCCTAAAGGCGATTGGCTCAGTA
GTGGACTCACGATCTGACTCTTGACGTTTTCCTTGTCTTGCTTAAGCTGG
TCCATAACCGTTCTCGCCTCCTCCAGCCGACCGTTCGCCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig656:73459..78298-

>mRNA_F-serratus_M_contig656.17523.1 ID=mRNA_F-serratus_M_contig656.17523.1|Name=mRNA_F-serratus_M_contig656.17523.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig656:73459..78298- (Fucus serratus male)
ATGGAGGATCCTGTCCACTGGAAGCGAAAAAGACCGCGACGGACACGCAA
AATTATTCCTTCCTGGATTGCCGACGCCCCTTGGAATTATGCCTACCCGA
GTAAGCTCCTTGTTAATACCTTAATCCTTTTCGCGGCAACTATCGCATTG
CGAGGACGAGCTTCTGCCTCCTCCAACCCTCTGGAGCTCAACGGCGGATC
TTGCTTGGCTATGGCAGGCAAGGACTGTGTGGCGGTAGCGGTCGACCGTC
GGTTTGGACAGGAAGGACAGCTGGTATCGGCAGAAGCCAAGCGTGTTTTA
AAGATGGAGGATCCTGTCCACTGGAAGCGAAAAAGACCGCGACGGACACG
CAAAATTATTCCTTCCTGGATTGCCGACGCCCCTTGGAATTATGCCTACC
CGAGTAAGCTCCTTGTTAATACCTTAATCCTTTTCGCGGCAACTATCGCA
TTGCGAGGACGAGCTTCTGCCTCCTCCAACCCTCTGGAGCTCAACGGCGG
ATCTTGCTTGGCTATGGCAGGCAAGGACTGTGTGGCGGTAGCGGTCGACC
GTCGGTTTGGACAGGAAGGACAGCTGGTATCGGCAGAAGCCAAGCGTGTT
TTAAAGATCAACGGGCAGCTCCTGTGCGGATTCACGGGGCTGTGGACGGA
CGTGATGACGGTGATGCAAGACGTATCGTTTGAAGTGGCCCTCAAGGCCG
CCGCGGAAAACAACCGTCCCACATCCCCGGCAGCGCTGTCGGGGCTTCTC
TCCACCCTGCTCTACGCTCGCCGCGGGAGTCCGTTCTTCGTTGAACCGAT
TATCGCCGGCATGGATTCGAGAGGAAAGCCGTTTTTGTGCGGGCAGATCA
ACGGGCAGCTCCTGTGCGGATTCACGGGGCTGTGGACGGACGTGATGACG
GTGATGCAAGACGTATCGTTTGAAGTGGCCCTCAAGGCCGCCGCGGAAAA
CAACCGTCCCACATCCCCGGCAGCGCTGTCGGGGCTTCTCTCCACCCTGC
TCTACGCTCGCCGCGGGAGTCCGTTCTTCGTTGAACCGATTATCGCCGGC
ATGGATTCGAGAGGAAAGCCGTTTTTGTGCGGGCAGGACATCTTAGGGGC
TTGCGTAAAAGCGGACGATTTCGTAGTAGCCGGGACGTCGGCACAGTCCC
TCTACGGCACCTGCGAGGCATTTTTCCGGGCCGGCATGGACAGGGAGGAG
CTGTTCCGAGTGGCGGCGCGGTGCCTCCTGTCCGCGCTTGAGCGCGATTG
TCTGAGTGGCTACGGAGCGGTGGTGCACCTCATCACCCAAGACGGGATAG
AAACACGCGAGCTGACGACGCGTATGGACTAGGACATCTTAGGGGCTTGC
GTAAAAGCGGACGATTTCGTAGTAGCCGGGACGTCGGCACAGTCCCTCTA
CGGCACCTGCGAGGCATTTTTCCGGGCCGGCATGGACAGGGAGGAGCTGT
TCCGAGTGGCGGCGCGGTGCCTCCTGTCCGCGCTTGAGCGCGATTGTCTG
AGTGGCTACGGAGCGGTGGTGCACCTCATCACCCAAGACGGGATAGAAAC
ACGCGAGCTGACGACGCGTATGGACTAG
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