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Homology
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE) HSP 1 Score: 739 bits (1909), Expect = 7.890e-225 Identity = 630/1632 (38.60%), Postives = 773/1632 (47.37%), Query Frame = 3
Query: 1572 RVALHNKDPYGAPGNVGFGSGALEQK----------------------------------------------------------------IKGVENSSQQLTIRFERGGHTSGIGASDQGGSNL-SGQASPSLGFAYRRTPRSSAHIRPRGLGGAKREVGGGEGGSSSRAILPRASSS-RLLLEGVLTPSGKS-IISPDVYLSGGMKRIRFPSGVVEDAGQRSTASXXXXXXXXXXXXXXXXXXXMQYRQQRLAIEEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----VAATSPQGSSRRRETRADGGSGRKFLPEASPHPSSAGKTTDVRAAARGAVDKGALEASPP-GNGERLFTEGSGDNGLDF-DTLDQDGYATIPPMSELATMGDGALRAVSGFKVIRGGFGSIAWKEPVDLRGVDIRKVVKIEYKAASVYDDLPEGKQSPRWARGSTGPQW*HCRACSPSTIIRRTSSIEATRRRF-ARTRK-----------------EWVQSS*ATSAYP--------------------------------GPGCSRRSTGPATRWTTAKTKRTMMIAARRRGLRLRRRRICLHRPLAIPRRCAPAGRCRTKVSFGGGGGGR*GYLLPKRGRMSKLSQDGTSEPPGEGANVCQSPPTPPSLVS*LNVRVVCSRPLTCIPMCM-ATAAMIP-RQPCRSPP-RSTMSCRLEDQ-PNK------STYGSIFLAPRPLQGGRVRDIISPSPTKSSPSVFKPSPLPRRPPSPPQRRALRIPEDAEAAKTFRPILAEPESQVLSLLANAWEIAPGEP-RDEAARGTVRAGRIVADLGLRLGRGFRASWGPGGVLVCPGSVGGGDAPGKHAVRMKRLNPTPAAFGRDTESLYVGSLRNHLRFAEPRLDG----------CNVPRWELPRRRSDKPDNYADLVKCMHGYVAAHAAAGAQCLHSCGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVPGDVLTAASGFGSVGENDEASPAARRKPRLQN------GSPTP*PRACPPASGV----------------RRLHQRKRVKRHEEPGGEFWSC*ACAASKMPPKLRWTLGCHGWPSCSRPRPRASAARCGMTRAGFSPSKWRCGRATEPTPTCRRRRSSCTSCSDARVSGTLGSGELSARVRLAS-PFSRLAEAA---RSL-LVVRRGRXXXXXXXXGGRCGESLRVSGGRQRGNS---------------PTARYFREPTHHDKADLDQVCRELRRVHLEGERK------ELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSALPTPAPCDQEDILATVAAGTKAEQARETKLNRLISAASVELAGDMASEACALAPGSLYLGGSARRRLAECFEKIDRQLK-GGAQGRVSFERSVGSGLSIDAVGDDPRTKEFYAYKEILEAAEEGATSGVVVGW--SEEKVERLTRM-RSVKPAATRILGRAAACEALSSVW 5876
RVALHN+DPYGA GN FGSGALEQK IKGV+NSSQQL I FER H G +GQASPSLGFAYRRTPRS+A+I+PRG GG P SS+ RLL EG LTP KS I+SPD YLSGG+KR+ P+ E+ +R ++S + + G G AA+SP GS+R GG G SP PS+ G TDVRAAA G D+ L+ASP GNG EG G G DF TLD + Y T P M+ELA M L AVSGF V R G+GSIAWKEPVDLRGVDI VV IE+K+ SVYD+L EG++ P G P R + R +A +RR+ AR K EWV + S Y G + R PA T++K ++ RR LA+P G S GGG S+ +G S+ G A S T V VV T P T+ + P R P + RS++ + E + P K S RPL R++ P P+ R P ALR PEDA+AA FRP ES+VL LLANAWE A GE D AARG VRAG+ VADLGLR+GRGFRASWGP G L CP ++GGG G H VR+ R +PTP+A RD LYV LRNHL A P + PRW LPRRR+D+P NY LV+C+HGYV H AGA S G ++ED PEWVLEQ+WRLASAMWGQEEGEG+VQDLP+PGD+ AA G+ D SPAARR+ + + S P P P RR+ + V+R + + A A+ +P +L L RP AR G ++W+ A P + S ++ G G ++ R ++ P L + R L L + G GG G+ SGG N+ PTARYF EPTHH+ A LD+VC ELRRV++ R E G D G GRDRCVL LLAMYPS+ GG ASGV+LLSALEPMAVTPD MDYRHSWHLM VVEALGVAEV DR K AA+TEG+RFQL GLWEWAVYVALT EG DRR ATARE+V+RHG+ +LG ++ D ER R L L P +WL+EA A+RAGYEH+SA+P+P +E A A G+ A +TKL L SA S ELA + A EAC +AP S++LGG LAE +I ++ GG Q + G VG KEFYAYKEI+EAA E G S ++++RL RM R V+P+A+R+LG AAA + + + W
Sbjct: 657 RVALHNQDPYGAAGNPTFGSGALEQKVGVGEGRVARRRFLLPVARLREASVRPCRGEVARLHVKAMVRGEDMNSRRLSFMVGIYPRASAHIKGVQNSSQQLAISFERHHHAGSSGXXXXXXXXAGAGQASPSLGFAYRRTPRSNAYIQPRGFGGGXXXXXXXXXXXXXXXXXPAVSSTARLLSEGALTPGPKSGILSPDAYLSGGVKRLNIPTET-EERRERFSSSRPLIRSSPATAAIAAPPAEDGGTSSQPDVVGGAANGSGVEEFKGEPATAVPATSSEMNGGGPNRVDFAASSPDGSARHDVRGGRGGRGGVV----SPPPSTGGIGTDVRAAAGGGGDESLLDASPATGNGRLFQGEGVG-GGNDFAPTLDLEEYKTEPSMAELAKMTKDELAAVSGFVVSRQGYGSIAWKEPVDLRGVDIGSVVAIEHKSVSVYDELAEGEEKPALGEGLNKPT----RVTLYNIFPRGADPSDAEKRRYEARVSKNTEKIGAKLVSYDVDIGEWVFETFHWSRYAMSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRAGRVPRPARGTTSSKGQKRAASEGRR------------STKLAMPD-TDDEGSVADNASDAGGG------AREASNTRSRTGVEGESKMAGSDAAGFDSMDTDTPEV------VVDGDDGTAWPDSQRVTSTLFPERDPSQMEHMRSSLFGQEERRMPRKAADVGASXXXXXXXXXRPLSWARLQ----------------PEPVARPP-------ALRNPEDAKAAAAFRPAAGGLESRVLRLLANAWEPAAGEVVSDAAARGAVRAGQAVADLGLRMGRGFRASWGPDGKLFCPRAMGGGARNGFHGVRVSRFDPTPSASDRDVHRLYVEPLRNHLGSAGPLAEAQAKRHGAAAAAVPPRWALPRRRNDRPQNYDTLVRCIHGYVEVHRLAGAAATSSSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRVQDLPLPGDLQRAAD-LTLAGDCDGGSPAARREAAVGDWLARAVSSCVPSPSGGPSXXXXXXXXXXXXXDADRETWRRVLELLSVRRVHD------AAVAAMAAGLP-RLAVMLTAVATQGGGGGRP---PARYGSKFLAQQAAQWQAAGADARMPQ--------EAFSVVQLLGREGFRDVGLRGLISKGPGGSLRPSLDWMRQLGLCLWFG--AGASAGIGGEDGDRDGGSGGGVVANAIEAYDTLVADGEALLPTARYFLEPTHHESAHLDKVCTELRRVYMPPPRPPAGLSLEKSGG-EDRGYGRDRCVLRCLLAMYPSRKAGGGVGGASGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGGPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLENLGIPGAWLHEAAAVRAGYEHKSAVPSPT-YPRESGSAVPAVGS----AHDTKLKLLTSAGSAELALEAAKEACMVAPSSMFLGGETLSLLAEKLGEIAWLVEEGGKQEEIGSLGGEGRKNGGAGVG-----KEFYAYKEIVEAAVEERAGGAAAALRRSRDEMDRLERMWRIVQPSASRVLGAAAAHQTMETFW 2198
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A7S2FW32_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW32_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.970e-16 Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 3
Query: 4869 GVVADTGTGRDR----CVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSAL 5378
G++ G GR C+L LL +Y GG + A A+ P AVTPD +DYRHSW L V +AL + P IT+ QL GLW+WAVYV + ++ D RR A+ R +V+R G+ + D+++ L EL P WL+EA A +GY + L
Sbjct: 3 GLMGHGGGGRSLPKQGCILYHLLQLY----CGGDADGNAENATEQAMAPGAVTPDKLDYRHSWQLSTVFDALDLYPRPKE-SADRITDAFASQLIAVGLWKWAVYVYMHLD-DNTRRSASIRGLVLRFGW-------TDPDDKQYPTLSELQVPSVWLDEAIAYASGYSFKRDL 163
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A7S2R6I5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6I5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.100e-13 Identity = 167/635 (26.30%), Postives = 224/635 (35.28%), Query Frame = 3
Query: 3630 GTVRAGRIVADLGLRLGRGFRASWGPGGVLVCP-----GSVGG--GDAPGK---------HAVRMKRLNPTPAAFGRDTESLYVGSLRNHLRFA-------EPRLDG-----CNVPRWELPRR----RSDKPDNYADLVKCMHGYVAAHAAAGAQCLHSCGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVPGDVLTAASGFGSVGENDEASPAARRKPRLQNGSPTP*PRACPPASGVRRLHQRKRVKRHEEPG------------------GEFWSC*ACAASKMPPKLRWTLGCHGWPSCSRPRPRASAARCGMTR----AGFSPSKWRCGRATEPTPTCRRRRSSCTSCS----DARVSGTLGSGELSARVRLASPFSRLAEAARSLLVVRRGRXXXXXXXXGGRCGESLRVSGGRQRGNSPTARYFREPTHHDKADLDQVCRELRRVHLEGERKELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGY 5360
G A R+ DLGL +GR FRAS+GP G L+ P GS G P + HAV ++R+ P Y L H RF E +G VPR+ LP R+ P Y LV +H +C G S EW + Q WRLA A+WGQE+ V L L A G + D A R + +NG P R S R L R + E P G A S +L L CHG S P A T+ A +KW + + + S + D G L SG L SP + AA L +RG GESL+ P +Y D + C+ + R + + R CVL RLL +Y G ++ AL P A T D +DYRH+W L+ ++EA+ E A + + QL GLW W+VY + D R R V+RHG +P + + L +L PV+WL+EA A G+
Sbjct: 335 GQASASRMSLDLGLSMGRSFRASFGPQGQLILPFLAPRGSTRRTVGATPSEAAAAMTGLAHAVTIERVAPRA-----QVADAYTPLLAEHHRFRVRAGEADEAEEEGPSGAEARVPRFHLPTGFRPDRTMDPTAYPKLVDFLH-----------RCAELT-EGHALSWHEEEWPVAQMWRLAGALWGQEQRTVVVPRLEAGAAALPGA-GAAPLPVYDHA----RERQDCRNGLHRPSDRRAALLS--RWLAHCVRGRAQEAPAPVAGAAPAFLEIFGSLSEGRVPDAVVSAISAGEVRLAGMLACHGASSAGTRGPGGVGAGDEETQSAVLAAEQLAKWLAEQHDDFVDKGLQLVYSLLTDDLQHLDPDQVGHLESGVL-------SPEDCRSTAA--ALDWQRGLGLRLWFEQAP--GESLQF---------PFQQY---------TDAFRTCKAAPPLPAYAAR-HWHEAPEFSASPRHLCVLYRLLELYCL----GEEDCRPVDVVVQALMPQAATADPLDYRHAWQLLTLLEAVNFYERLPEDTAAMVIDSFASQLIAVGLWTWSVYAYAHLR-DPRLRSHAIRSTVLRHG-----PDATPAEMD---FLQDLGVPVAWLHEARAYARGH 902
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: W5LX98_LEPOC (Nup96 domain-containing protein n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LX98_LEPOC) HSP 1 Score: 84.0 bits (206), Expect = 5.040e-13 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 3
Query: 4980 ALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 5378
+L L+P VT D +DYR SWHL V++AL + + ++ + + QLE AGLWE A++V L I D RRE RE++ H + E+ + L LH PV W++EA AIRA G +H+ AL
Sbjct: 126 SLQQLLDPCTVTADRLDYRLSWHLWNVLQALNYSHLSEQCQ-GLLHASYAAQLESAGLWEMAIFVLLHIP-DTSRRERAVREMLNLH---CSLEETEDSAEKEQFLTERLHVPVQWIHEAKAIRACREGDKHREAL 256
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A821P2J9_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821P2J9_9NEOB) HSP 1 Score: 81.6 bits (200), Expect = 2.710e-12 Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 3
Query: 4836 VHLEGERKELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRH-GFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 5378
+LE L + ADT + R R V LL +Y + L L+P +VTPD +DYR SWHL V++AL + + + + QLE GLW+WAV+V L + D REA+ RE++ RH ++L+ + + L+ +L P W+ EA AIRA G H+ AL
Sbjct: 16 AYLEEHGLRLEAIDADTSSIR-RDVCFHLLKLYSDRCYD----------LRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYRHLSGQSQ-GLLHASYAEQLETVGLWQWAVFVVLHVP-DAVIREASVRELLTRHCALRETPETLA----KEKFLVEKLLIPAEWIYEAKAIRARRDGDHHREAL 183
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A8J7NW24_ATRSP (Nuclear pore complex protein Nup98-Nup96 (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NW24_ATRSP) HSP 1 Score: 84.0 bits (206), Expect = 3.750e-12 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 3
Query: 4980 ALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 5378
+L L+P VT D +DYR SWHL V++AL + + ++ + + QLE AGLWE A++V L I D RRE RE++ H + E+ + L LH PV W++EA AIRA G +H+ AL
Sbjct: 1462 SLQQLLDPCTVTADRLDYRLSWHLWNVLQALNYSHLSEQCQ-GLLHASYAAQLESAGLWEMAIFVLLHIP-DTSRRERAVREMLNLH---CSLEETEDSAEKEQFLTERLHVPVQWIHEAKAIRACREGDKHREAL 1592
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: B3DLM1_XENLA (Nuclear pore complex protein Nup98-Nup96 (Fragment) n=1 Tax=Xenopus laevis TaxID=8355 RepID=B3DLM1_XENLA) HSP 1 Score: 82.4 bits (202), Expect = 9.690e-12 Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 3
Query: 4896 RDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 5378
RD CV LL +Y + L L+P +VTPD +DYR SWHL V++AL + + + + QLE GLWEWA++V L I REA RE+++RH ++ +S +E L+H L P W++EA AIR+ G H+ AL
Sbjct: 956 RDVCV--HLLKLYSERQYD----------LCQLLDPSSVTPDPLDYRLSWHLWMVLQALNYTHLSEH-RQGTLHASYAAQLENVGLWEWAIFVLLHIPHP-HVREAGVRELLIRHC--VVRESPESLAKENF-LIHRLCVPAQWVHEAKAIRSRRDGDRHKEAL 1102
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A1Y3EXW9_9BILA (Nucleoporin autopeptidase (Fragment) n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EXW9_9BILA) HSP 1 Score: 75.1 bits (183), Expect = 1.120e-11 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2
Query: 2678 PRGQTKPALGEGLNRPAVVTLQGLFTKHHNPTDE------------QHRSYEEKVRKNTERMGAKFVSYECLSGTWVFETFHWSRYAMDDSEDXXXXXXXXXXTRAEAK-----ETKD 2980
P +KP +G+GLNR A++TL+ ++ P D+ +H YEEK+++ E+M AKFVSY +G+W+FE H+S+Y +DD D ++E K ETKD
Sbjct: 40 PDASSKPPIGQGLNRAAIITLERVW-----PNDKTRQEPIKDAKRLEHLGYEEKLKRACEKMNAKFVSYAPTTGSWIFEVKHFSKYGLDDDSDEDEENGGPLSKQSEEKTVEKKETKD 152
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: UPI001CF2228C (nuclear pore complex protein Nup98-Nup96 isoform X1 n=3 Tax=Bufo TaxID=8383 RepID=UPI001CF2228C) HSP 1 Score: 82.0 bits (201), Expect = 1.440e-11 Identity = 67/188 (35.64%), Postives = 95/188 (50.53%), Query Frame = 3
Query: 4836 VHLEGERKELCGVVADTGT-GRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDR---LKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYE---HQSAL 5378
+LEG L + ADT RD C LL +Y + L L+P +VTPD +DYR SWHL V++AL + ++ L A+ TE QLE GLWEWA++V L + V R E + RE++ RH L ++ +E+ L+ +L P W+ EA AIRA + H+ AL
Sbjct: 1419 AYLEGHGLRLEAIDADTSAIKRDVCF--HLLKLYSDRCYD----------LRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYTHLSEQSQGLLHASYTE----QLENVGLWEWAIFVMLHVPNAVIR-ETSVRELLNRHCT--LRETRETLTKEKF-LIEKLCIPAEWIYEAKAIRARRDEDHHREAL 1586
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A433PW47_9FUNG (Nuclear protein 96-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PW47_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 4.470e-11 Identity = 59/192 (30.73%), Postives = 87/192 (45.31%), Query Frame = 3
Query: 4872 VVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHL-MKVVEALGVAEVPDRLKVA--------------------------AITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEER----RRLLHELHTPVSWLNEADAIRA 5354
+V D T + R +L ++ +Y ++ G L AL P +TP +DYR +WHL + + L V + DR VA ++T + FQLE G+WEWAV+V L +EG + R R+IV RH L P+ EE + L+ +L P+ W+ EA A RA
Sbjct: 1514 IVKDGATDQQRDILFHIIKLYTDKAHG----------LEQALAPRGITPSPLDYRLTWHLYLLFAKVLKVRDFADRWVVAEDVLDEESSTPEAMVTTQNGWSATADSVTASLAFQLETLGMWEWAVFVLLYLEG-AESRAIAIRDIVSRHL------PLEPKTEEEVQTEKFLVEKLKLPLQWIREAKAQRA 1688
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 360.1 |
| Seed ortholog evalue | 1.7e-96 |
| Seed eggNOG ortholog | 2880.D7FX93 |
| Preferred name | NUP145 |
| KEGG ko | ko:K14297,ko:K18716,ko:K18720 |
| KEGG TC | 1.I.1 |
| KEGG Pathway | ko03013,ko05164,map03013,map05164 |
| KEGG Module | M00427 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003723,GO:0005048,GO:0005198,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006325,GO:0006342,GO:0006344,GO:0006348,GO:0006355,GO:0006403,GO:0006405,GO:0006406,GO:0006409,GO:0006606,GO:0006607,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006996,GO:0006997,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0016458,GO:0016973,GO:0017038,GO:0017056,GO:0019219,GO:0019222,GO:0031080,GO:0031081,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031503,GO:0031967,GO:0031975,GO:0032386,GO:0032879,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0033554,GO:0034397,GO:0034398,GO:0034504,GO:0034613,GO:0034629,GO:0034641,GO:0035392,GO:0036228,GO:0040029,GO:0042277,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044464,GO:0044613,GO:0044614,GO:0045184,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046822,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050000,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051031,GO:0051049,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051640,GO:0051641,GO:0051649,GO:0051664,GO:0051668,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071431,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072657,GO:0080090,GO:0090304,GO:0090435,GO:0097064,GO:0097159,GO:1901360,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | structural constituent of nuclear pore |
| EggNOG OGs | KOG0845@1,KOG0845@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03036 |
| Exons | 11 |
| Model size | 6269 |
| Cds size | 1539 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932014.0817358-UTR-F-serratus_M_contig6558:14040..14148 | 1622932014.0817358-UTR-F-serratus_M_contig6558:14040..14148 | Fucus serratus male | UTR | F-serratus_M_contig6558 14041..14148 + |
| 1690964102.8453507-UTR-F-serratus_M_contig6558:14040..14148 | 1690964102.8453507-UTR-F-serratus_M_contig6558:14040..14148 | Fucus serratus male | UTR | F-serratus_M_contig6558 14041..14148 + |
| 1622932014.102149-UTR-F-serratus_M_contig6558:14676..14920 | 1622932014.102149-UTR-F-serratus_M_contig6558:14676..14920 | Fucus serratus male | UTR | F-serratus_M_contig6558 14677..14920 + |
| 1690964102.8633006-UTR-F-serratus_M_contig6558:14676..14920 | 1690964102.8633006-UTR-F-serratus_M_contig6558:14676..14920 | Fucus serratus male | UTR | F-serratus_M_contig6558 14677..14920 + |
| 1622932014.1208072-UTR-F-serratus_M_contig6558:15257..15361 | 1622932014.1208072-UTR-F-serratus_M_contig6558:15257..15361 | Fucus serratus male | UTR | F-serratus_M_contig6558 15258..15361 + |
| 1690964102.8736014-UTR-F-serratus_M_contig6558:15257..15361 | 1690964102.8736014-UTR-F-serratus_M_contig6558:15257..15361 | Fucus serratus male | UTR | F-serratus_M_contig6558 15258..15361 + |
| 1622932014.1379294-UTR-F-serratus_M_contig6558:15890..17083 | 1622932014.1379294-UTR-F-serratus_M_contig6558:15890..17083 | Fucus serratus male | UTR | F-serratus_M_contig6558 15891..17083 + |
| 1690964102.8840587-UTR-F-serratus_M_contig6558:15890..17083 | 1690964102.8840587-UTR-F-serratus_M_contig6558:15890..17083 | Fucus serratus male | UTR | F-serratus_M_contig6558 15891..17083 + |
| 1622932014.1560614-UTR-F-serratus_M_contig6558:17639..18626 | 1622932014.1560614-UTR-F-serratus_M_contig6558:17639..18626 | Fucus serratus male | UTR | F-serratus_M_contig6558 17640..18626 + |
| 1690964102.8947344-UTR-F-serratus_M_contig6558:17639..18626 | 1690964102.8947344-UTR-F-serratus_M_contig6558:17639..18626 | Fucus serratus male | UTR | F-serratus_M_contig6558 17640..18626 + |
| 1622932014.1727643-UTR-F-serratus_M_contig6558:19762..19954 | 1622932014.1727643-UTR-F-serratus_M_contig6558:19762..19954 | Fucus serratus male | UTR | F-serratus_M_contig6558 19763..19954 + |
| 1690964102.9076424-UTR-F-serratus_M_contig6558:19762..19954 | 1690964102.9076424-UTR-F-serratus_M_contig6558:19762..19954 | Fucus serratus male | UTR | F-serratus_M_contig6558 19763..19954 + |
| 1622932014.190916-UTR-F-serratus_M_contig6558:21598..21910 | 1622932014.190916-UTR-F-serratus_M_contig6558:21598..21910 | Fucus serratus male | UTR | F-serratus_M_contig6558 21599..21910 + |
| 1690964102.9199116-UTR-F-serratus_M_contig6558:21598..21910 | 1690964102.9199116-UTR-F-serratus_M_contig6558:21598..21910 | Fucus serratus male | UTR | F-serratus_M_contig6558 21599..21910 + |
| 1622932014.2041538-UTR-F-serratus_M_contig6558:23228..23340 | 1622932014.2041538-UTR-F-serratus_M_contig6558:23228..23340 | Fucus serratus male | UTR | F-serratus_M_contig6558 23229..23340 + |
| 1690964102.930889-UTR-F-serratus_M_contig6558:23228..23340 | 1690964102.930889-UTR-F-serratus_M_contig6558:23228..23340 | Fucus serratus male | UTR | F-serratus_M_contig6558 23229..23340 + |
| 1622932014.2194355-UTR-F-serratus_M_contig6558:23507..24269 | 1622932014.2194355-UTR-F-serratus_M_contig6558:23507..24269 | Fucus serratus male | UTR | F-serratus_M_contig6558 23508..24269 + |
| 1690964102.9413059-UTR-F-serratus_M_contig6558:23507..24269 | 1690964102.9413059-UTR-F-serratus_M_contig6558:23507..24269 | Fucus serratus male | UTR | F-serratus_M_contig6558 23508..24269 + |
| 1622932014.2403371-UTR-F-serratus_M_contig6558:24302..24652 | 1622932014.2403371-UTR-F-serratus_M_contig6558:24302..24652 | Fucus serratus male | UTR | F-serratus_M_contig6558 24303..24652 + |
| 1690964102.9516618-UTR-F-serratus_M_contig6558:24302..24652 | 1690964102.9516618-UTR-F-serratus_M_contig6558:24302..24652 | Fucus serratus male | UTR | F-serratus_M_contig6558 24303..24652 + |
| 1622932014.2989547-UTR-F-serratus_M_contig6558:26730..27096 | 1622932014.2989547-UTR-F-serratus_M_contig6558:26730..27096 | Fucus serratus male | UTR | F-serratus_M_contig6558 26731..27096 + |
| 1690964102.9935966-UTR-F-serratus_M_contig6558:26730..27096 | 1690964102.9935966-UTR-F-serratus_M_contig6558:26730..27096 | Fucus serratus male | UTR | F-serratus_M_contig6558 26731..27096 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932014.2592642-CDS-F-serratus_M_contig6558:24652..25644 | 1622932014.2592642-CDS-F-serratus_M_contig6558:24652..25644 | Fucus serratus male | CDS | F-serratus_M_contig6558 24653..25644 + |
| 1690964102.9616725-CDS-F-serratus_M_contig6558:24652..25644 | 1690964102.9616725-CDS-F-serratus_M_contig6558:24652..25644 | Fucus serratus male | CDS | F-serratus_M_contig6558 24653..25644 + |
| 1622932014.2793758-CDS-F-serratus_M_contig6558:26183..26730 | 1622932014.2793758-CDS-F-serratus_M_contig6558:26183..26730 | Fucus serratus male | CDS | F-serratus_M_contig6558 26184..26730 + |
| 1690964102.979425-CDS-F-serratus_M_contig6558:26183..26730 | 1690964102.979425-CDS-F-serratus_M_contig6558:26183..26730 | Fucus serratus male | CDS | F-serratus_M_contig6558 26184..26730 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6558.17520.1 >prot_F-serratus_M_contig6558.17520.1 ID=prot_F-serratus_M_contig6558.17520.1|Name=mRNA_F-serratus_M_contig6558.17520.1|organism=Fucus serratus male|type=polypeptide|length=513bp
MPPKLRWTLGCHGWPSCSRPRPRASAARCGMTRAGFSPSKWRCGRATEPT PTCRRRRSSCTSCSDARVSGTLGSGELSARVRLASPFSRLAEAARSLLVV RRGRSSRRRWWWGGRCGESLRVSGGRQRGNSPTARYFREPTHHDKADLDQ VCRELRRVHLEGERKELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGGGG GASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAI TEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDS LSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSALPTPAPCDQEDIL ATVAAGTKAEQARETKLNRLISAASVELAGDMASEACALAPGSLYLGGSA RRRLAECFEKIDRQLKGGAQGRVSFERSVGSGLSIDAVGDDPRTKEFYAY KEILEAAEEGATSGVVVGWSEEKVERLTRMRSVKPAATRILGRAAACEAL SSVWDEAKIPEA* back to topmRNA from alignment at F-serratus_M_contig6558:14041..27096+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig6558.17520.1 ID=mRNA_F-serratus_M_contig6558.17520.1|Name=mRNA_F-serratus_M_contig6558.17520.1|organism=Fucus serratus male|type=mRNA|length=13056bp|location=Sequence derived from alignment at F-serratus_M_contig6558:14041..27096+ (Fucus serratus male) GCAACGCCGTTCAGTAGCAGCAACACCCAGCAGCAGACGCCCCAGGCCTT
CGGTAGCACGGGCAGTACATTCAGCTCCGGCACCACTGGTGCCTTTGGTT
CGAAGCCGGTGAGCTTCCTAGGAAGGGGCACAGCTTACCTATTAGAAGGA
TTAGTCGATGTGTAGCGTATTTTTAATTTTTAATTATTTTTGCATTTTTT
CCCGGCAAGCTTGGCGCTCTAGGGAGATACCTTCAAATCTTGAGAGTAGT
CGCTTCGTCATGGCATCGGCTCTTGAGTACCGTGCGTATTTTCGTTTTCT
TGTTTGTTTTGATTTGATTTTAAGGGTTTTAGGGGTTCGGAGGGTCTCGT
TTTTTTTCTCCGGCGAGCTTAGCGCTCTTGGAATACGGCCCTAAAACTCT
TATTAGAGTAATCGCTGTGTCGTGTCATCGACTCTGGGGGTCATCTCTAG
CCTCTATGGGGGGGTGAGTGAATCACTCTCGCAGCACCGTGATATAACTT
TCGTCCTCTTCTAAAGCTCAGGTCATGGTCGGTATTCCTGATTCCGTAGC
CCTTGACATTTTGTTTCGAAACGCCTGTGTACCCCAAGTGAAATAGCCTA
CATCCCTCATTTTTCGCCTGCCTTCCGTCCTACCAGGCATTCGGCGCCGG
CTCTACACCGACCGGGTTCGGGTCAACAACTACCGGCGCCTTCGGCGCCA
GACCGAGCATGTTCAGCGCCCCGACGACCTCGACCACGTCAGCCTTCGGC
ACACCCACCGCGGGAACCTCGACCTTTGGTCGCACTACTTCAACGTCCCC
TTTCGGAGCGACTCCAGCCCCCGCCACGGGAGGCTTTGGCTCGACCACGG
GTGTATTCGGGACTGCCGCGGCTCCCTCCAGTCCGTTCGGCGCTCCGGCC
TCCGCGGGCAGTCTGGGCGGCTTCGGATCCACCGCCTTCAACCCGTTCGG
CAAACCCCCGTCGAGCCCGTTCGGCGCGCCGACACCAGCAGCGCCGGCGA
CAGGCAGCGTGTTCGGCGCACCCACTCCCGCCCCGGCCGCCGGGGTTTTC
GCGGGCTTCGGCTCGACGTCGACGACCGGCAGTGGTCTCTTTGGTTCGAC
CCCGGCTCCTGCGACCGGGGCCGGGGCTCCCGCGTCCGCGGGGGCGGGGG
CTGTTCGGATCCACCACGCCAGCGACCAGCCTAGGCGCCTTCGGGGCAGG
TACATCTGTGTTCGGAGCTTCGACGCAGAAGGGGACGGGGAACCCTTCTT
GGCGAGAGACAAAAGTGGATGATCCGACCGGGAAGTCCGCGGGGAACCTC
ATGTCGATATCTGCCATGAAGGTGACAGCGATTGAGGGGGACGGTGGGGT
GTTGAGACCTGATTTTTTATCTTCGTTTACATAACACCCGAGGTACTGTT
AAATATACTTCATGGACGATGGTTTATCTAGAATTTTCCCGGCGATGCTT
TCACCAAGTGCGCTGTTGAATTTCATGTGTGAGATAGACGATCGGCAGAG
TGCCTGATGATGACTCCGAGAATAAAGTGGTCAATCCGATGTGCTCGCAA
GACCCCGACGCGCCGAAGTTGTCCTGTGTCAGGGGGGATGACGCGGCCGT
TGTTTGGTACGCAAGAGCACCCGATACATAACAATTCCTGTTTATCCCCA
GTTTCAGTTCAAATTATCTCTAAACAATTCGTACTGCTGTGCTCTTGTAT
CTTATCCTGACACATTCTCCACACCGTTACCCCCGCTACCCAACTTGGTC
CTAGTCAGTTCTGACCTTGATCGCCCTTTTTCTCTTTTTAAGCTGCACGT
TGTCTTTCTCCTTTACGACCTTCTCTTCCTCTTTCTGCTCCTCCCAACAG
GAGTACGAGGGAAAGAGCCACGAGGAGCTGCGGGTCGAAGACTATCTTCA
TAACCGCAAGAACAGCTCGGCCGTTTCCACCGCCAGCAAAGGCTTCGGCA
CCACCCCGGCCCAATCCACGGGTCTCTTCGGAGGGTTAGGATCCACGCCC
TCCGCTGCCCCGGCCGGTGGAGGCTTCAACTTTGGGAGCCTTTCGACCTC
GCCACCCCCGCTACCTCAACGTTCGGGTTCGGGTCTTCGACGCGCACGCC
CGCGCCCGCCGCCGGAGGCTTTGCCGGCTTCGGCGCCACTCCAGCGCCCG
CGCCCTCGACGGGTTTGTTCGGGGCACCTGTCTCCGCTACGACAAACACC
TTTGGCGTTCCGGCCCCGGCTCCTTCCGGCTCCTTTTCCTTTGGAGCGAC
GGCTCCCGCTCCCAGTGGCGGCTTCAGCGGACTGTTCGGCTCTTCCTCAG
CCTCGCCCGCCTCGGGCCCGGGAACCTTCGGGGCGCTGGCCCCTGCCGCG
GGAACGTTCGGCACCAGTTTCGGTTCCGCTGGTGCAACGCCGGCGCCCGC
TCCCGGTGGCTTCGGGAGCAGCATCGGGACGTTTGGTACACCGACCCCAG
CCCCGACCGCGGGCACGGCATTTTCCTTCGGGGCCTCAACAACTCCCGCC
TTCGGAGCCCCAGCTCCGGCCCCGACCGGGGGAGGCTTCGGCACGGCGGG
AGGCGGGAGTTTGTTCGGGGCAACGTCCGCCTCGACGACCCCTGCTGCCG
GAGGGTTTAGCTTCAATAAAACCGCGGGGGCACCAGCACCCTCGACGACA
CCCGGCGCGTTCGCGTTCGCGCCTCCCAAACCCGCTGGCACCGGGGCGTT
TGGTGTTCCTGCTCCCTCAGGTGGAATGTTCGGTTCGGTCGCCCCAGCCC
CGAGTGCCGGGGCGTTCAGCTTCGGTGGCACGGCTCCCGCGCCCGCCGCC
GTTGGATTCGGTAATTCCGGCAGTACTTTTGGGAGCTCTGCGTCGGCGCC
GGCGCCCGGTTCGGTTTTCGGCGCGCCGGCCACTGGAAGCCAATGTGGAG
CGGGGTCGACAGCGCCGGCCTCCGGCGGGGGGTTTGGATCAGCTCTGACA
CAGCAGCAGCAACAGCGAGTTGCGCTCCATAATAAAGATCCATACGGGGC
CCCCGGCAACGTGGGGTTCGGTTCCGGAGCATTGGAGCAAAAGGTGAGAA
ATTAATGGAGCGTGTGGGTTCAAGTGTTGGACCGCAGGGTTCACGACAGG
TACGCAGTCTATTTACTCTACAAAGGTCAAAGGAGGTGTAGCGCTGGTTA
AGCGGAGATATGCGTGAATAAAATACACGTCCCGTACAAGCTCATAGAGG
GTTGGTTCTGTATGGCGGGTGCAGCAGTGAGAGAGGTTTTGATTGATCGT
GCTCCGTCAGCCCTCGAGAGGCCCGAAGCCGCATCGGGTTCATAAAAGGT
TAGCGCCCAGAGATCGGTCCGCACTAAAAAGCCGTTTGTCGTCTCTTGAT
GTACGCTGGCAGGTTTACCCCTGCGGCATATGTCAGACTATGTACGACAC
CTCTGTCTGTTGCGAGCTGTACAATGCCAACGACCGATCACCGATTCCGT
CTCTCATCCCCCGAAAGTGAAATCTACTGTAGGAACGGAGAGAGAGGTTG
TTCGACTCGCCTTTTCCGAAAAATAAAAGCTTTCCCGGAATCACATTGCC
AAACCTTCCCTGCCCACCCCGCTCCACCGTAACCTCCTTCGTCTCACAGA
TCAAGGGCGTCGAAAACAGCAGCCAACAGCTAACCATCCGCTTCGAGCGT
GGCGGTCACACGTCTGGGATTGGTGCAAGCGATCAGGGCGGCAGCAACTT
GTCCGGCCAGGCGTCTCCGTCGCTAGGTTTCGCTTACCGTCGCACCCCTC
GCTCCAGCGCGCACATTCGTCCCCGCGGGCTCGGCGGCGCAAAGCGTGAA
GTCgggGGGGGTGAGGGGGGTAGCAGCAGCAGGGCGATATTGCCCCGCGC
CTCGTCCAGCCGGCTGCTGTTGGAGGGCGTGCTCACCCCGAGCGGTAAAT
CGATCATCAGCCCGGACGTATACCTCAGTGGAGGCATGAAGCGCATCCGT
TTTCCCTCGGGGGTGGTAGAGGACGCGGGTCAGCGCTCCACCGCCTCGAC
GACCTCGCGTACGGTCAAGCCAGTGGATGAAGAAGGCGAAGAAGGCGTTG
ACGGGATGCAATATAGGCAGCAGCGACTTGCCATCGAGGAGGGCGGTGGC
GCCGGAGGCGTGGAAGAGACCAAGGGCGATTCTGCTGGTGCTGCTTCCAA
GACCACACGGAGAGACGGCAAAGAAGAGGGAGTCGCGGCGACGTCTCCTC
AGGGAAGCTCGCGCCGCCGTGAGACCCGCGCGGACGGCGGGAGCGGGAGG
AAGTTCTTGCCGGAGGCCTCCCCTCACCCCAGCAGCGCGGGGAAGACAAC
CGACGTCCGTGCGGCGGCCCGCGGGGCGGTAGACAAGGGCGCCCTGGAGG
CGTCGCCCCCCGGCAACGGAGAGCGTCTGTTCACCGAAGGGAGCGGAGAC
AATGGCCTTGACTTCGACACTCTAGACCAGGACGGTTACGCGACAATTCC
TCCCATGTCAGAGCTGGCGACCATGGGGGACGGTGCTCTGCGGGCGGTGT
CTGGGTTTAAGGTGATCAGGGGAGGGTTTGGGTCCATCGCCTGGAAGGAA
CCGGTGGATCTCCGCGGGGTTGACATCAGAAAGGTGGTGAGTGCGTGTGT
TGTGTGTTGTTATCCCATTTATTCTGGACGCCAGACTTGTGGACGCACCA
GCCGGGGTCACACAGGAGGAAGGTCACACAGAATTTATCCACCTTCCTTC
TGCGGTGATTGCCTTAATTTTCATCGCGAAAGGATTCAGCCGTCCCTTTC
CCTCATCGACCGTGAAGTCGATTTTTTTTTTAATCACCAGTGAATCATTC
TCCACTTGTTGGGTCTTTTTTTCATTTTTTCTGTGAGGAAAAATCCCAGT
TCGTGTGACTGCACCGAGATTCAAACTGTGGTCCCAACGTCTGAGGGTTT
CGAGGGTACCAACTGAACCACCGAGGCGACCGACATTGAGATGACGTAAT
TTTGGAGAAACAATATTTTTTCGGACTTAATTTTGCTCTATGGCATCTTG
TATATTTGGTTGTCGTGTCGCTTTTCCCACTCTTGCGCGTCTGTGTGTTT
GTGTGTGTGTGTGTGTGTGTATTTATTTATTAAATTGCACATAACCGCGC
AATCCGGCCCTGTCATCCTTGTCATTCTATGCCACTCGCATTTATCCTCC
CGAgGGGGGATCAATGATACTTATCTCTCTCTCTCTCTCTCTGTGTGTGT
TTATTGAATAGCACATAACGGCGCGATCCGGCTCTTGTCATCCTAGTCTT
TCTATGCTAATCGCATCCGTCCTCTCAAGGGGGGATACTTGATACGGATG
ACACAGCCGTATCTCTAATCAGTCTCGACAAAGGGGACACACACACACTC
TATACTTGTTATATCCCAGCTATTATATGAAAGTCTTGTGTGTGTGCGTT
TGTGTGTATTTAGTGTGCCTAATTGTGTGTTTGTCTGTTCGTGTGTGTGT
GTGTGTGTCATGTGTGTTTATTTGTCTGTCTATGAATAACATGTGAAGAG
GAAGGTTTTGTTTTTGTTTAGTTTCAGAAAGGATTTGACATCAATCGATC
GCGTCTTATGCGTGGCGTCGGCAAGAAGACGTTTTGAGATAACCTTAGTG
CAAAATTCTCGCTTGGCACTCTCTTCTCCGCCCCTTGAAGTCAGTTACGA
CCCATTTCCTCCCTACCCTTGATCATCCCCCCACCCCCCTTTCCCCTTTA
ACATTTGAATTAAAAAAAACAGGTGAAGATCGAGTACAAGGCTGCTTCCG
TGTACGACGATCTCCCCGAGGGCAAACAAAGCCCGCGCTGGGCGAGGGGC
TCAACAGGCCCGCAGTGGTGACACTGCAGGGCTTGTTCACCAAGCACCAT
AATCCGACGGACGAGCAGCATCGAAGCTACGAGGAGAAGGTTCGCAAGAA
CACGGAAAGAATGGGTGAGTTTTATCAGAGCGGCCGTCCGGGGGCGGACG
AACCTCCTGCCCGTTGTGTGCGCGACGTGATGTGGGCGTGAACCATGGGG
AGATGATTGTAAGATAGGTTACCTCTATCGCTAGACGCTCGCTAAAGGAT
AGGATTGTTACTACATATCGTCAGCTTTACACGCGTGTTGGCGTCATGTG
TGGTTGGTGTATTGCGTGGTTGTATTAGCGTCTTCCCCACCACTGCACCG
GGAAAGTACCACGCCTGACTCTATAGAAAACAAACAGGCTGACGCGGCAG
TCGTCTTTTCTCGAAGTCATTTTCTGTGCGGCGCGTTGTTGTGGAATTGT
TCATCAGCATAGCGTGAAGGTCTGTTTACTAATTACGTACAAAGGAGATG
CTCGGCAGAACCCTTTATGCGCAGCATCCTGTATCGGATCTTCCCATCTC
TCCCCGGTTCTCGCCTACGATTTTTTATCGCCAGGCAAATTCAGCACTCT
ACGATGCACATTACATTTGTGTGGTAAACTCTTGCCCAAGTTGATGCACC
CTGCAGATTAGAAGCTCACTACGCTCGCAATAAATAATGTTCAACTGACT
TGCACTTAGCACAGCAGCACCACCTATTAATATTACAGAACATAAAGGTG
TTGTATGTACGAAGTTAGTAAAGCATTTTTTTTTCTACTGACTGGAGGAT
GCTTAGAAGGTATAGGCGCGTTCTGATTTTTCTTCAAAAACCGTTTCACA
CTCGCAAATTTGGTCTACTAATCTAATGATCATAGGTTTTTGCGCTGTAA
TCGAGCAAAATATAGTTCTTCCCCCTGACTAGGGGGGAGGGGAGGGATGC
TCAGAAAGTCTAGATGCGTTCAGACTTTTACAAAAGAAAGGTTTGGGAAA
AAGTAAAAAGTTTGACGTTTCCTATCTTTCTGCGTCGCAAGCCTGCCCCC
TCTCACACACACACGGACACAAAATCCTCCTTCCAATGCATATAAACAGT
ACTCTACAAGGTGTTCCTCGATATGTGCGCGTCCGAACGGACAACTCTTG
TAATGTTTCCTGTTGAGAATGCCACTTGCCTTACGGATGCCCCGAACAGA
CAAGACAGCATTGTCCCCTCCTCCCTTTGGCGCTATTAAAAACTTTGCGC
GGTTCACAGTATTTAGTTTAGTACACGCTGATTACGACAGACATGCCTCC
AGCTCCCGCACCCGCCCATTGCTATCCATAGACACACATATACATAAGTA
CCATATAACATAATAGCTATTAATAGCACTATACTTTCCCCCTCCACACA
CTTTTATTTTTTCCCCCGAACTTTTATTTTCCCCCTCTACTTTTAGAGTA
TATATATAAATATATATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGC
GGGACGGTACAGCCGAAACCGTCTCGCGAGGTCGAATTGTCAGAATATTA
TTTTCCCTGTTCAGCTGACCAGCATTAGCATGATTGGCAACCTTGTACCA
GGTTGATCCATAATCTTGCTTTATGTCTGACCATACATATATATGAACCG
TTGGTTACCAACCCCTGTATAAAACCATGAAAAAATGAAAACGGGTTTTC
CGCCCGCAACCCCTTCTCCCCCTCCCCGCCATTGATCTATAATACCCCGA
CATGACAGGTGCAAAGTTCGTGAGCTACGAGTGCTTATCCGGGACCTGGG
TGTTCGAGACGTTCCACTGGTCCCGCTACGCGATGGACGACAGCGAAGAC
GAAGAGGACAATGATGATCGCGGCACGAAGACGAGGGCTGAGGCTAAGGA
GACGAAGGATATGCCTCCACCGCCCCCTCGCAATCCCGCGGCGGTGCGCT
CCCGCAGGCCGATGCCGAACAAAGGTGAGTTTTGGGGGGGGGGGGGGGGG
GAGATGAGGCTACTTACTGCCCAAACGTGGGAGAATGAGCAAGCTGTCGC
AGGACGGGACATCCGAACCTGTCCCGCGTCCAATCTGCTGTGAAGGGATG
ACTACACCCACACATACAAATATATTATATGTTTCATGCGTTTTTAATTG
CTGGACTGCTGGTGCTGAGTTTTGTGTTTTTGGAGGTAGCCAAGATATGA
TGCGTGACAAGGGTAGAAGTAACAGGACATGACACGCTTCAGCGATGGAA
CTTCAGCTCCTACTGGACTTTCGTATGTTATCATGAAGCATTTTAGAATC
GGCAGGCAATAAAGCCTAGTCTCTTAGATTTTTCAATGTGGACGTGTCTT
TAAGCTGGTTTTCATTCCCTTCTTCTTTGGGGGGGGGGTCAACCAATCTA
TTGCAGAAAAAAAGTGACGAGAGGTGTCCATTTTGTGTACAGTACAGTAT
CTACTTTACTACGAGCGTACTGTACCGTATCACAGCTGTGTATCGTAATT
TGGCCTAATTTGTCACCTCGTTGTAGAATAAATGTGTGTAAAGGGTTATG
TACCCTTTGTACGGACCGAGATTGCACGTGTGTAATGTACTGGCTAATTC
TAGATCCATGGTGGGTAAATCAAAATCGTTTTTTTTTTAATACAGGTACA
GACATATTCTTTTCCACATGTTTGACCCTATCAACATGTGATATAGTTTG
CTTATGCCACTTATAGAGTACCAATATCATAAGTTCCTTAGTAACTTTTT
TTAATGTTTTTTTTCATCAGTATATGAAAATTATTGTAACAGGTCGACTT
GATGAAAAATTTGCACATACTTTGGTGAAAATCTTGCACATAATTTTTCC
GTTTATGGTTTTTCTAGCGTTTCCAGGGTAGTGGAGACCGGGACTAAAGT
TCAGTATAGTACAGCATAGTGCACAGGTACCTAAATGTGCAGCATAGCGC
GTACTGTATTGTAATTGAAACAAATCCAACCGGTAGAAACTGAACCGAAT
CCGGACCGGACCGGACCGCACGACGGAAACGCAGGCCACAGGCGGCAGCT
GGATGTCGCAGCTGCACGCGGCGGCTCCACCTACTATATGCCGGATGAGG
AAAGTAGCAACGCGGACAGCGCTTCCGACAGCGCTGGGCCCCGCTGACCG
CGACAATCTCCCGTGGCGGCGGCGTTGGTCATGAGGAAAAGGTGAAACAG
AAGTATTAAAAAGCAAGACGCGAGTCTGAGGGAAAGGCGAGGGGGGTGGT
ACATTGAGAGGCGTTCAAAGCGGAACGCGCGCGATCGGACGTAGGTGGGG
TTCTCTTTACAATTTTGTGAATTTTGAGAGAAGAGGGAAGTTTGTGCTGC
GGAGTGCTTGTAACCCTCCGCACGCCCTATTAAGAGAGCCGGGGGAGGGG
GCAAACGTGTGTCAATCCCCCCCTACCCCACCTTCTCTGGTGAGTTAGTT
GAACGTGAGAGTGGTCTGTTCTCGTCCCCTCACATGCATCCCCATGTGTA
GTAGCTGCTACGAAGTGCATGTTTTGACTCTTGTGTGTTTCGTCTTGTAC
GTGCGTGTTTTGGTACGTTCGTATGTGGGGACCGAATCGCAAACGTTTTA
TATAGGTCGTGCTGGACGAGTGGGACGCTAAATTTGCAGGCGGGAATCCA
AACATCGGTGACGGTAGTGGCGACGGCGGCCATGATACCTCGGCAGCCTT
GCCGATCGCCGCCGAGATCGACGATGTCTTGTCGTCTAGAGGACCAGCCA
AACAAGAGCACGTACGGTTCGATCTTTTTGGCGCCCCGCCCTCTCCAAGG
GGGCCGAGTGAGAGATATTATCTCTCCGTCGCCGACCAAATCGTCGCCGT
CGGTGTTTAAACCCTCGCCTCTGCCGAGGCGTCCTCCCTCGCCGCCGCAG
CGCCGTGCGCTCCGGATCCCGGAAGACGCAGAGGCGGCGAAAACATTCCG
GCCAATATTAGCCGAACCCGAGAGCCAAGTGCTGAGCTTGCTCGCAAACG
CTTGGGAAATCGCTCCTGGAGAGCCAAGAGATGAGGCCGCTCGCGGAACC
GTCCGCGCGGGACGCATAGTCGCCGATCTTGGGCTTCGCCTCGGGCGCGG
GTTTCGCGCCAGCTGGGGTCCCGGCGGGGTGCTGGTGTGCCCGGGCTCGG
TCGGCGGAGGCGATGCACCGGGAAAGCACGCGGTGCGCATGAAGCGGTTG
AACCCCACCCCGGCGGCGTTCGGTCGGGACACGGAGTCGCTATATGTCGG
TTCGCTGCGCAACCACCTGCGGTTCGCGGAGCCCCGCCTCGATGGGTGCA
ATGTCCCTCGCTGGGAGCTTCCGAGGCGTAGATCTGACAAGCCGGATAAC
TACGCCGATCTCGTGAAGTGCATGCACGGTTACGTGGCCGCTCACGCGGC
GGCGGGAGCGCAGTGCTTACACTCATGCGGTGGCCCCTACAGGGGAGGAG
GGTCAAGCGCAGGAAGCGGGGGCAACTCTAGCGAGGACGGGCCCGAATGG
GTTCTGGAGCAAGCATGGCGGCTGGCCAGCGCCATGTGGGGTCAGGAAGA
GGGTGAGGGCAAGGTGCAAGATCTCCCTGTTCCGGGCGACGTTCTCACAG
CCGCTTCTGGCTTCGGCAGCGTGGGTGAGAACGACGAGGCATCCCCGGCG
GCTCGCAGGAAGCCGCGGTTGCAAAATGGCTCGCCGACGCCGTAGCCTCG
TGCGTGCCCACCGGCGAGTGGAGTGCGACGGCTGCATCAGCGGAAGCGAG
TGAAGAGGCACGAGGAACCTGGAGGAGAGTTTTGGAGTTGCTAAGCGTGC
GCCGCGTCGAAAATGCCGCCGAAGTTGCGATGGACGCTGGGCTGCCACGG
CTGGCCGTCGTGCTCGCGGCCGCGACCCAGGGCATCGGCCGCCCGGTGCG
GAATGACGCGAGCAGGTTTCTCGCCCAGCAAGTGGCGTTGTGGCAGGGCA
ACGGAGCCGACGCCTACATGCCGCAGGAGGCGTTCGTCGTGTACCAGCTG
CTCGGACGCGAGGGTTTCCGGGACGTTGGGCTCCGGGGAGTTATCGGCAA
GGGTCAGACTCGCCTCACCCTTCTCTCGACTGGCTGAGGCAGCTCGGTCT
CTGCTTGTGGTTCGGCGCGGGCGCTCCTCTAGGCGACGGTGGTGGTGGGG
TGGCCGATGCGGTGAAAGCTTACGAGTCTCTGGTGGCCGACAAAGAGGCA
ATTCCCCCACTGCCCGGTACTTCCGAGAGCCCACCCACCACGACAAGGCG
GACCTGGATCAGGTTTGCCGGGAGCTGAGGCGAGTGCACCTCGAGGGGGA
AAGGAAAGAGCTCTGCGGTGTCGTCGCAGACACCGGGACCGGGCGAGACC
GCTGCGTCCTGAACCGCTTGCTCGCCATGTACCCGTCGCAGTCGACCGGA
GGTGGTGGTGGTGGCGCGTCAGGGGTTGCCCTTCTTTCGGCGCTGGAGCC
AATGGCGGTCACACCTGACTTCATGGACTACCGTCACTCGTGGCACCTCA
TGAAGGTGGTCGAGGCGCTCGGGGTGGCGGAAGTCCCGGACCGCTTGAAG
GTTGCAGCCATCACCGAGGGCATGCGGTTCCAGCTCGAGTGTGCGGGGCT
CTGGGAGTGGGCGGTCTACGTGGCGTTGACAATCGAGGGTGACGTCGATC
GTCGCGAGGCGACGGCGCGGGAGATCGTCGTACGCCACGGGTTTGGCCTG
CTAGGAGATTCTCTTAGCCCAAGAGACGAGGAGCGACGCCGCCTGTTGCA
CGAGCTCCACACGCCGGTCTCTTGGCTGAACGAGGCTGACGCCATCCGTG
CTGGGTGAGCGCGTGTGCGGTTGGACGTTCAAAGCACGTGGGGAATGGTT
GTTTTGACGAAAAGTTCTCGCTTTCGTTGTCAACGGCGATAAGGGAGTAT
CTTCCGCGGTCGGCGTCTGTGTTCTATTTTATTCCGTTTGCAGATAATTT
CGCGCCTCAGGAGGGAATCGGTTTATTGAAAGGCTACAAGTATCGAATGC
GAGATGACTGGATGTGCGAAGTGCGCTACAGTACAGTACAGTACATGATG
CGTGCCTGTCtgTGTGTGTGTGTGTGTGTATGTTTTGTTCGCGTTTTTAG
GGGGTTTTCGACTACAGTACTTCCTCGAAACACCGCATTTCATCCACTTT
GTACCTACGCTCGCCTGAGTTTCGACCCTCTACCCCCCTGCCATCGAAAA
CTTCCAGCGGTGAAAAATGGCTGCGACGTTGCCCTCACGCCTTCCCTCGC
ATATGAACAGTAAAAAGTTGTCTCTAAATACAAGTACTCACGAGGAGTGA
TTCTCCCCCGTTGCGTCCCGCTTCGCCTTTTCCTCAACACAAGGTATGAG
CATCAGTCGGCCTTGCCGACGCCTGCACCCTGCGACCAGGAAGACATCCT
CGCCACAGTCGCGGCAGGGACGAAGGCAGAACAGGCGCGCGAGACCAAGC
TTAATCGCCTTATATCTGCTGCATCGGTTGAACTGGCCGGGGACATGGCT
TCGGAGGCTTGCGCGCTGGCTCCCGGTAGTCTGTATCTCGGAGGGTCCGC
GCGCAGGCGGCTCGCGGAATGTTTCGAGAAGATCGATCGGCAGCTGAAGG
GTGGAGCGCAAGGTCGGGTCTCGTTCGAGCGTAGTGTTGGCTCGGGCCTG
AGCATCGACGCGGTCGGTGACGACCCCCGCACCAAGGAATTCTATGCGTA
CAAGGAGATCCTTGAGGCAGCTGAGGAAGGCGCGACATCTGGGGTAGTGG
TGGGATGGTCCGAAGAGAAGGTTGAGAGACTCACGCGTATGCGAAGTGTG
AAGCCTGCGGCGACGCGGATTCTTGGCAGGGCGGCGGCGTGCGAGGCGCT
GAGCTCGGTGTGGGATGAGGCGAAAATCCCGGAGGCGTAGAGGACGGAAC
GACTGACTTACGTCGGGTGGGAAAGGGAGTGAGAGGAAGAGGAAATCTCA
CTGGCGCCGAGCGCTTTTGTAGTGTTTGTCTTGCTGGAGATTGTGATATT
ACGTGATAACATGATGCTTTAGGTGTGAAGCTTTCGTACCTCTTGCGCTG
TGACTTGACTGCAGCAGATTCGATGGCTTGTGAGGGAGCTTGAAGAGGTT
TTGCGGGGGCTTCAGCGGCTTGATGGGTTTACGTTGATGTGTGCTACGTG
TAGATGCTCGCGCAGTAGTAGAAGCCGGCCGACTGGCTGACGATGCTTTG
TCGGCTCGTTTCCTTTTTTCTCTTGTTTTGTTGTTTGTTCGTGGCACTGG
TATGTT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig6558:14041..27096+ >mRNA_F-serratus_M_contig6558.17520.1 ID=mRNA_F-serratus_M_contig6558.17520.1|Name=mRNA_F-serratus_M_contig6558.17520.1|organism=Fucus serratus male|type=CDS|length=3078bp|location=Sequence derived from alignment at F-serratus_M_contig6558:14041..27096+ (Fucus serratus male) ATGCCGCCGAAGTTGCGATGGACGCTGGGCTGCCACGGCTGGCCGTCGTG CTCGCGGCCGCGACCCAGGGCATCGGCCGCCCGGTGCGGAATGACGCGAG CAGGTTTCTCGCCCAGCAAGTGGCGTTGTGGCAGGGCAACGGAGCCGACG CCTACATGCCGCAGGAGGCGTTCGTCGTGTACCAGCTGCTCGGACGCGAG GGTTTCCGGGACGTTGGGCTCCGGGGAGTTATCGGCAAGGGTCAGACTCG CCTCACCCTTCTCTCGACTGGCTGAGGCAGCTCGGTCTCTGCTTGTGGTT CGGCGCGGGCGCTCCTCTAGGCGACGGTGGTGGTGGGGTGGCCGATGCGG TGAAAGCTTACGAGTCTCTGGTGGCCGACAAAGAGGCAATTCCCCCACTG CCCGGTACTTCCGAGAGCCCACCCACCACGACAAGGCGGACCTGGATCAG GTTTGCCGGGAGCTGAGGCGAGTGCACCTCGAGGGGGAAAGGAAAGAGCT CTGCGGTGTCGTCGCAGACACCGGGACCGGGCGAGACCGCTGCGTCCTGA ACCGCTTGCTCGCCATGTACCCGTCGCAGTCGACCGGAGGTGGTGGTGGT GGCGCGTCAGGGGTTGCCCTTCTTTCGGCGCTGGAGCCAATGGCGGTCAC ACCTGACTTCATGGACTACCGTCACTCGTGGCACCTCATGAAGGTGGTCG AGGCGCTCGGGGTGGCGGAAGTCCCGGACCGCTTGAAGGTTGCAGCCATC ACCGAGGGCATGCGGTTCCAGCTCGAGTGTGCGGGGCTCTGGGAGTGGGC GGTCTACGTGGCGTTGACAATCGAGGGTGACGTCGATCGTCGCGAGGCGA CGGCGCGGGAGATCGTCGTACGCCACGGGTTTGGCCTGCTAGGAGATTCT CTTAGCCCAAGAGACGAGGAGCGACGCCGCCTGTTGCACGAGCTCCACAC GCCGGTCTCTTGGCTGAACGAGGCTGACGCCATCCGTGCTGGATGCCGCC GAAGTTGCGATGGACGCTGGGCTGCCACGGCTGGCCGTCGTGCTCGCGGC CGCGACCCAGGGCATCGGCCGCCCGGTGCGGAATGACGCGAGCAGGTTTC TCGCCCAGCAAGTGGCGTTGTGGCAGGGCAACGGAGCCGACGCCTACATG CCGCAGGAGGCGTTCGTCGTGTACCAGCTGCTCGGACGCGAGGGTTTCCG GGACGTTGGGCTCCGGGGAGTTATCGGCAAGGGTCAGACTCGCCTCACCC TTCTCTCGACTGGCTGAGGCAGCTCGGTCTCTGCTTGTGGTTCGGCGCGG GCGCTCCTCTAGGCGACGGTGGTGGTGGGGTGGCCGATGCGGTGAAAGCT TACGAGTCTCTGGTGGCCGACAAAGAGGCAATTCCCCCACTGCCCGGTAC TTCCGAGAGCCCACCCACCACGACAAGGCGGACCTGGATCAGGTTTGCCG GGAGCTGAGGCGAGTGCACCTCGAGGGGGAAAGGAAAGAGCTCTGCGGTG TCGTCGCAGACACCGGGACCGGGCGAGACCGCTGCGTCCTGAACCGCTTG CTCGCCATGTACCCGTCGCAGTCGACCGGAGGTGGTGGTGGTGGCGCGTC AGGGGTTGCCCTTCTTTCGGCGCTGGAGCCAATGGCGGTCACACCTGACT TCATGGACTACCGTCACTCGTGGCACCTCATGAAGGTGGTCGAGGCGCTC GGGGTGGCGGAAGTCCCGGACCGCTTGAAGGTTGCAGCCATCACCGAGGG CATGCGGTTCCAGCTCGAGTGTGCGGGGCTCTGGGAGTGGGCGGTCTACG TGGCGTTGACAATCGAGGGTGACGTCGATCGTCGCGAGGCGACGGCGCGG GAGATCGTCGTACGCCACGGGTTTGGCCTGCTAGGAGATTCTCTTAGCCC AAGAGACGAGGAGCGACGCCGCCTGTTGCACGAGCTCCACACGCCGGTCT CTTGGCTGAACGAGGCTGACGCCATCCGTGCTGGGTATGAGCATCAGTCG GCCTTGCCGACGCCTGCACCCTGCGACCAGGAAGACATCCTCGCCACAGT CGCGGCAGGGACGAAGGCAGAACAGGCGCGCGAGACCAAGCTTAATCGCC TTATATCTGCTGCATCGGTTGAACTGGCCGGGGACATGGCTTCGGAGGCT TGCGCGCTGGCTCCCGGTAGTCTGTATCTCGGAGGGTCCGCGCGCAGGCG GCTCGCGGAATGTTTCGAGAAGATCGATCGGCAGCTGAAGGGTGGAGCGC AAGGTCGGGTCTCGTTCGAGCGTAGTGTTGGCTCGGGCCTGAGCATCGAC GCGGTCGGTGACGACCCCCGCACCAAGGAATTCTATGCGTACAAGGAGAT CCTTGAGGCAGCTGAGGAAGGCGCGACATCTGGGGTAGTGGTGGGATGGT CCGAAGAGAAGGTTGAGAGACTCACGCGTATGCGAAGTGTGAAGCCTGCG GCGACGCGGATTCTTGGCAGGGCGGCGGCGTGCGAGGCGCTGAGCTCGGT GTGGGATGAGGCGAAAATCCCGGAGGCGTAGGTATGAGCATCAGTCGGCC TTGCCGACGCCTGCACCCTGCGACCAGGAAGACATCCTCGCCACAGTCGC GGCAGGGACGAAGGCAGAACAGGCGCGCGAGACCAAGCTTAATCGCCTTA TATCTGCTGCATCGGTTGAACTGGCCGGGGACATGGCTTCGGAGGCTTGC GCGCTGGCTCCCGGTAGTCTGTATCTCGGAGGGTCCGCGCGCAGGCGGCT CGCGGAATGTTTCGAGAAGATCGATCGGCAGCTGAAGGGTGGAGCGCAAG GTCGGGTCTCGTTCGAGCGTAGTGTTGGCTCGGGCCTGAGCATCGACGCG GTCGGTGACGACCCCCGCACCAAGGAATTCTATGCGTACAAGGAGATCCT TGAGGCAGCTGAGGAAGGCGCGACATCTGGGGTAGTGGTGGGATGGTCCG AAGAGAAGGTTGAGAGACTCACGCGTATGCGAAGTGTGAAGCCTGCGGCG ACGCGGATTCTTGGCAGGGCGGCGGCGTGCGAGGCGCTGAGCTCGGTGTG GGATGAGGCGAAAATCCCGGAGGCGTAG back to top
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