mRNA_F-serratus_M_contig6534.17514.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 2.270e-179 Identity = 261/418 (62.44%), Postives = 310/418 (74.16%), Query Frame = 1
Query: 100 EDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
E GC T+T+LY R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G++FYCRG+ IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+P Y GRSF+NCVSE + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT +GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSD P D SDGRPSDN F +N I N G+KI E DDTVIT N FTGTS EF DAQ+T W N
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGN 487
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 3.930e-174 Identity = 257/449 (57.24%), Postives = 314/449 (69.93%), Query Frame = 1
Query: 13 IMTIPDTCTGTKS--STRWASGTGLNGRIYLEDGGCGTMTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
+M I +C + S R+A+ +G+ GR+Y E GC TMT+LY R E+DG + KGP+Y+LDD+ + PS +T WLL ++L++ G +FYC+GT GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YENGRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSD PD S DGRPS N N + + G+KI E DD NTF FEF ++ +T+WS N
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 6.380e-165 Identity = 244/427 (57.14%), Postives = 300/427 (70.26%), Query Frame = 1
Query: 100 EDGGCGTMTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
E GC T+T+LY R E+DG + KGP+Y+LD + + +P+SVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G +ND GECRMDII SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY +A +GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F +N ++N+ G+K +D+ V+T N FTGT EF DAQ T WS N
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 2.610e-157 Identity = 229/418 (54.78%), Postives = 287/418 (68.66%), Query Frame = 1
Query: 100 EDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
+ GGC T+++LY + + KGP+++LD ND + + ++ TGKWLLT+DLFV G+ YCRG G+GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + P + Y++GRSFI CVSE ++TC N+ GECRMDII SEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY+NTI TETG+KI E+D+ IT N F+GT+ EF +A D VWS N
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 4.590e-143 Identity = 207/348 (59.48%), Postives = 247/348 (70.98%), Query Frame = 1
Query: 121 MTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 1137
MT+LY R E DG + KGP+Y+LDD+ + PS +T WLL ++L++ G +FYC+GT GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 1.840e-135 Identity = 224/389 (57.58%), Postives = 263/389 (67.61%), Query Frame = 1
Query: 184 ILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
+LDD+ + + SP+SVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +AVGIFLHRSSD+ EVY G DAPD S+ GRP+ N+F +N I+NT G+KI +D+ VI+ N FTGT EF DAQ T WS N
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 2.970e-135 Identity = 222/430 (51.63%), Postives = 282/430 (65.58%), Query Frame = 1
Query: 94 YLEDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDET--CEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYSNTISNT--ETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
Y E GGCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N + +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+ +GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD PD +S+GRPSDN F NTI G+ I E D V N FTG S +EF+D+ DT W N
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVV--GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 4.390e-135 Identity = 221/429 (51.52%), Postives = 283/429 (65.97%), Query Frame = 1
Query: 85 GRIYLEDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESD--ETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSL---FEFKDAQDTVWSSN 1350
G+ Y+ GGC T+T++Y ++ G GP+++LD ND+++ S TG WLL D+ V +GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD L IA +GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P+AS D G DN+F++NT+ E G+KI +A+ V T N F S + F+D +D VW++N
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVV--GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 380 bits (977), Expect = 1.170e-120 Identity = 213/445 (47.87%), Postives = 264/445 (59.33%), Query Frame = 1
Query: 106 GGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYS---PSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDE--TCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1350
GGC T+T++Y ++ S GP+Y+LD +++I+ +S TG WLLTS L +L G Y GT GGD D LRIQST DF E+RG GGSL F T VTSWDT +YE GRSFINCV++++ + +C G+ + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYG QGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A+MESF A+I+DNT N KYGIR+SLG +N+++DN FD S YGLYTY+GSD PD S +DGR DNSF +NTISNT+ MKI E DD T N F FEF+D+ DTVW++N
Sbjct: 413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 367 bits (942), Expect = 2.210e-119 Identity = 214/463 (46.22%), Postives = 271/463 (58.53%), Query Frame = 1
Query: 1 SPIQIMTIPDTCTGTKSSTRWASGTGLNGRIYLED------GGCGTMTNLYKSRVESDGWTPKGPIYILD-DNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTF-TGTS---LFEFKDAQDTVWSSN 1350
SP ++ PD + + S R+A G R+YLE GGC T+ +++SR K P+Y +D D+ D+ + TG WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP +D +GRS+I+ VSE + DETCEG +N GE RMDI SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD PD S GR +N F N+ S E +KI EAD T N F G + + F DA ++V N
Sbjct: 33 SPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVS---ETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGN 482 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6534.17514.1 >prot_F-serratus_M_contig6534.17514.1 ID=prot_F-serratus_M_contig6534.17514.1|Name=mRNA_F-serratus_M_contig6534.17514.1|organism=Fucus serratus male|type=polypeptide|length=445bp MTIPDTCTGTKSSTRWASGTGLNGRIYLEDGGCGTMTNLYKSRVESDGWTback to top mRNA from alignment at F-serratus_M_contig6534:27769..30556- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6534.17514.1 ID=mRNA_F-serratus_M_contig6534.17514.1|Name=mRNA_F-serratus_M_contig6534.17514.1|organism=Fucus serratus male|type=mRNA|length=2788bp|location=Sequence derived from alignment at F-serratus_M_contig6534:27769..30556- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6534:27769..30556- >mRNA_F-serratus_M_contig6534.17514.1 ID=mRNA_F-serratus_M_contig6534.17514.1|Name=mRNA_F-serratus_M_contig6534.17514.1|organism=Fucus serratus male|type=CDS|length=2670bp|location=Sequence derived from alignment at F-serratus_M_contig6534:27769..30556- (Fucus serratus male)back to top |