mRNA_F-serratus_M_contig6502.17498.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 130 bits (327), Expect = 5.000e-32 Identity = 76/164 (46.34%), Postives = 92/164 (56.10%), Query Frame = 1
Query: 7 QEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMG--AAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRWQSGTSDDDVVIDVSGGSGGLVLLAGRTNGSWNEENLNEDQSVVIVVD 492
Q+G+++ D+ A DGSVVL G T G+WSGTN G GD AAVKLD G V W+WQ GT ++ L+G +A G V L G T G W S GG YDF +LD AD NE+ WQ GT DD V+ G V LAG T G WN+ N E V +D
Sbjct: 244 QDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGTNAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGG-YDFCAAKLD-ADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLD 405
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 107 bits (267), Expect = 5.490e-24 Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 7 QEGSTEFDSFLGAATVDDGS-VVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIR-RWQSGTSDD-DVVIDVSGGSGGLVLLAGRTNGSWNE-ENLNEDQSVVIVV 489
Q+G+ E+D A DG+ VLVG T G+W G N G GDFA V LD DG SWRWQDGT +++L+G AV +DG ++ L G G+ F ++L AD E+ RWQ G + D + D++ G+ G ++LAG T+GSW + NL D + +++
Sbjct: 180 QDGTDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTTEQEWLVGVAVQDDG-SILLAGQQMETTGDESV----FFTALKLQ-ADGEEVTWRWQGGNAGDASRLYDMAAGADGKMILAGYTDGSWEDGANLGADDFLAVML 338
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 101 bits (251), Expect = 5.960e-22 Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 4 LQEGST-EFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDL-ADCNEIRRWQSGTSDDDVVIDVSGGSGGLVLLAGRTNGSWNE 450
Q+GS S G A + DGSVVL G T G+++GTN G DFA VKL +GV+ W WQDGT+ ++ G A DG ++ G T G W +QA D V + + D + +Q+GT+ D I V G G LLAG + G+W +
Sbjct: 241 FQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWED 391
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.090e-19 Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 1
Query: 4 LQEGST-EFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDL-ADCNEIRRWQSGTSDDDVVIDVSGGSGGLVLLAGRTNGSWNE 450
Q+GS S G A + DGSVVL GVT G+++ TN G DFA VKL +GV+ W WQDGT +D GAA DG ++ G T G W QA D V + + D + +Q+GT+ + + V G LLAG + G+W +
Sbjct: 244 FQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGAALLAGYSTGTWED 394
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.370e-18 Identity = 52/136 (38.24%), Postives = 72/136 (52.94%), Query Frame = 1
Query: 40 GAATVDDGSVVLVG-VTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRWQSGTSDDDVVIDVSGGSGGLVLLAGRTNGSW 444
G A D GSVV VG + G W+ + GG DF A K+D DG + W+WQDGT+G D L ++ G+V + G T+ ++ G DF ++LD + WQ GTS D + + G V+LAG T G W
Sbjct: 104 GVAASDSGSVVAVGTINDGEWATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSGPSVGS-LDFVAIKLDSGGTT-LWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEW 237
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 6.470e-18 Identity = 64/193 (33.16%), Postives = 96/193 (49.74%), Query Frame = 1
Query: 1 MLQEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTV------------------------------GEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRWQSGTSDDDVVIDVSGGSG-GLVLLAGRTNGSWNEENLNEDQSVVIV 486
+ Q+G++E D F G A +GS VL G T G W GTN GG D AA+KLDA+G WR+QDG+V +D A+ DG + +G T G W + A G DFA +LD + EI R+Q GT ++D++ + G G V++AG+T +++ + + +V+V
Sbjct: 7 VWQDGTSETDVFAGGAMGPNGSCVLAGATEGAWDGTNFGGNDMAAIKLDAEGNELWRYQDGSVVLAGHQNLDFYVTXXXXXXXXXXXXXXXTPEDDIPYWMAMAGDGSVICVG-QTYGSW-DGDANGDSDFAAFRLD-GNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSADIVVV 196
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 4.340e-12 Identity = 54/137 (39.42%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 40 GAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTV-GEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRWQSGTSDDDVVIDVSGGSGGL-VLLAGRTNGSW 444
G+A+ DGS+V+ GVT G+W G G DF V LD DG WR+QDG++ G A DG +V L G+T G + + AG DFA V+L + WQ GT D+ V+ G G ++ AG T G+W
Sbjct: 143 GSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDG-SVVLAGTTDGNYAGTNAGA-QDFAVVKLTEEGVLDWT-WQDGTPYDESFEGVATGIDGTSMVFAGYTFGTW 276
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: A0A4R0HFZ0_9ACTN (Esterase n=8 Tax=Kribbella TaxID=182639 RepID=A0A4R0HFZ0_9ACTN) HSP 1 Score: 63.9 bits (154), Expect = 7.630e-9 Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 1
Query: 7 QEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRW--QSGTSDDD 375
Q G+ D G A G V L G T G+++GT G D + DADGV++WR Q GT G D AVD G V++GG T G + G F GV L + R W Q GT+DDD
Sbjct: 544 QVGTAASDEVWGVAPDPAGGVYLTGYTAGDFAGTLSGDKDILVARADADGVLTWRDQFGTTGNDKAAAVAVDASG-AVYVGGFTDGSL-ETPLG---KFDGV-LTKYSPDHARSWTRQFGTADDD 662
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: A0A4V2S4G7_9ACTN (Enterochelin esterase-like enzyme n=2 Tax=Kribbella sp. VKM Ac-2541 TaxID=2512217 RepID=A0A4V2S4G7_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 1.900e-8 Identity = 48/128 (37.50%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 1 MLQEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDG-GTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRW--QSGTSDDD 375
+ Q G+T D G A G V L G + G++SG G DF ++D +GV++WR Q GT G D GAAV DG G +++ G T G S F GV + A + R W Q GT++DD
Sbjct: 510 LQQFGTTAADEAWGLAADPSGGVYLTGYSAGDFSGALAGDKDFIVARVDQNGVLTWRDQFGTTGND--KGAAVSVDGSGNLYVAGFTDGALETSIG----KFDGVLVKYA-ADHTRTWTRQFGTTEDD 630
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Match: A0A841DY84_9ACTN (Enterochelin esterase-like enzyme n=2 Tax=Kribbella solani TaxID=236067 RepID=A0A841DY84_9ACTN) HSP 1 Score: 61.2 bits (147), Expect = 6.580e-8 Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 1
Query: 1 MLQEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDADGVVSWRWQDGTVGEDFLMGAAVDEDGGTVFLGGSTTGEWGNSQAGGGYDFAGVQLDLADCNEIRRW--QSGTSDDD 375
M Q G+ D A G V L G T G+++GT G D + DADGV++WR Q GT G D AV+ G +++GG T G A G +D GV A + R W Q GTSDDD
Sbjct: 573 MRQYGTAASDEVWALAADPAGGVYLTGYTAGDFAGTLNGDKDIMVARADADGVLTWRDQFGTSGNDKGAAIAVNRSG-ELYVGGFTDGAL--ETALGKFD--GVLAKYA-ADHTRTWTRQFGTSDDD 693 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6502.17498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6502.17498.1 >prot_F-serratus_M_contig6502.17498.1 ID=prot_F-serratus_M_contig6502.17498.1|Name=mRNA_F-serratus_M_contig6502.17498.1|organism=Fucus serratus male|type=polypeptide|length=164bp MLQEGSTEFDSFLGAATVDDGSVVLVGVTYGNWSGTNQGGGDFAAVKLDAback to top mRNA from alignment at F-serratus_M_contig6502:9294..13631- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6502.17498.1 ID=mRNA_F-serratus_M_contig6502.17498.1|Name=mRNA_F-serratus_M_contig6502.17498.1|organism=Fucus serratus male|type=mRNA|length=4338bp|location=Sequence derived from alignment at F-serratus_M_contig6502:9294..13631- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6502:9294..13631- >mRNA_F-serratus_M_contig6502.17498.1 ID=mRNA_F-serratus_M_contig6502.17498.1|Name=mRNA_F-serratus_M_contig6502.17498.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig6502:9294..13631- (Fucus serratus male)back to top |