mRNA_F-serratus_M_contig644.17366.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: D7FZR4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR4_ECTSI) HSP 1 Score: 536 bits (1382), Expect = 3.890e-187 Identity = 276/343 (80.47%), Postives = 296/343 (86.30%), Query Frame = 1
Query: 10 MGPKKKKKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMSCSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHRKDSG 1038
MGPKK K KG DGEVQGEDP LQNY R+SRLIGI+ N K+VAQLQ DEN+PL+ QIVVDDEHGPLGPGGTRAL TAIMGTGQDMRGG YRLI+SLRLWRAHCGDEGARSIAEVLRLGGAEV+LEY+ELFDD IGP GA ALGQ+LSIGCN SL SLKLD+NP LGSEG AALCRGLRTNSSLKQLHLPYCDLG DAGAPLGEMLS+TKL+LAVLNLQGNRLEAEGT+ LSPGLARNRSLVYLSL+DNGIGSGDAD ALEDFRDA MSCSTLTH+DLLYNRIGER AR+MLPAL +++IKHFLVDATLPT LFEALHR+DSG
Sbjct: 1 MGPKKSDKKATKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLA--------------QIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPAL---EQNRIKHFLVDATLPTPLFEALHRRDSG 326
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A835YWH7_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH7_9STRA) HSP 1 Score: 430 bits (1105), Expect = 5.420e-145 Identity = 218/339 (64.31%), Postives = 269/339 (79.35%), Query Frame = 1
Query: 25 KKKAKKKGADGE-VQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMSCSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHRKDSG 1038
KKKA KK +GE V GEDPLQLL NY ++ RLIG+ +N K+V+QLQD E+ P+ TQ+VVDDE GPLGPGGTRALTT+I+GTGQDM+GG Y+L++ LRLWR +C DEG RSI+E+LRLGG +++LEYLE+ D ++G GA+ALGQAL+ GCN SL SLKLD+N LGSEGA ALCRGLRTN++L+QLHLPYC +G DAGA LGEMLS++KL+LAVLNLQGNRL EG R L+PGLARN S+ YLSL+DN IG D AL FRDA ++C+TL+H+DLLYNRIG A +LPALAP+N ++I+ FLVDATLPT LF+ALHR+D+G
Sbjct: 4 KKKAAKKEHNGEAVAGEDPLQLLNNYQKFCRLIGVPINPKVVSQLQDQEHLPI--------------TQLVVDDEFGPLGPGGTRALTTSILGTGQDMKGGPYKLLKGLRLWRVNCADEGTRSISEILRLGGGDIKLEYLEMLDCRVGGTGALALGQALAAGCNRSLLSLKLDYNQTLGSEGARALCRGLRTNATLRQLHLPYCGVGGDAGAALGEMLSYSKLQLAVLNLQGNRLGGEGLRDLAPGLARNGSVTYLSLADNAIGGVARDVEALALFRDAILACTTLSHVDLLYNRIGPDGATTLLPALAPDN-AQIRQFLVDATLPTPLFDALHRRDAG 327
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A7S3HG08_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG08_9STRA) HSP 1 Score: 314 bits (805), Expect = 7.350e-100 Identity = 168/339 (49.56%), Postives = 227/339 (66.96%), Query Frame = 1
Query: 28 KKAKKKGADGE-VQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMSCS-TLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHRKDSG 1038
KK + K A GE V+GEDP+ LLQNY ++ + IG+ VN + L D+E P+ Q+++DDE GPLGPGGTRAL TA+MG+G M+GG Y+L+ SLR+WRA+C D+GA +IAE+LRLGGA+V+L +LELFD+ IGP GA ALG ALS G N SL +LKLD+N LG EG LC+GLRTN++LKQLHL +C+L +G L E+L+ ++ L V N+ GNRL +G +L GL N + L+DN I + D + L ++ ++ + LT +DL+YNRIGE A+I++ A+ PEN +KIK FLVD TLP +FE L RK G
Sbjct: 8 KKKEGKAAAGEAVEGEDPVVLLQNYQKFCKSIGLPVNTIVTKNLNDEEKYPVH--------------QLLIDDEFGPLGPGGTRALMTAVMGSGAGMKGGPYKLLNSLRMWRANCSDDGAAAIAEILRLGGADVKLSFLELFDNNIGPKGANALGSALSYGHNLSLLTLKLDYNATLGDEGVINLCKGLRTNATLKQLHLQFCNLSSASGPALSEVLANSRSGLEVFNIGGNRLGGQGLASLCVGLMHNTKCETICLADNMIDQMEDDIIGLTALKECLLNPTLALTSVDLMYNRIGEAGAKILIEAVNPEN-TKIKEFLVDLTLPMPIFEQLFRKGGG 331
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A482S5Z2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Z2_9ARCH) HSP 1 Score: 276 bits (707), Expect = 9.450e-86 Identity = 157/307 (51.14%), Postives = 198/307 (64.50%), Query Frame = 1
Query: 124 IAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTL-SPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATM-SCSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHRKDSG 1038
++ N I L D+E P+ Q+++DDE GPLGPGGTRAL TAIMG+G M+GG Y+L++SLRLWRA+CGD+GA +IAEVLRLGGA+V L YLEL D+ I GA ALG +LS G N SL +LKLD+N LG +G ALCRGLRTN SL+QLHL +C+L +G L ++L+ ++ L VLN+ GNRL +G L + GL N L+LSDN I + D L RD M S S LT +DL+YNRIGER +++ AL E KIK FLVD TLP LFE L +K G
Sbjct: 1 MSTNSLIGRTLNDEEKYPIE--------------QLLIDDELGPLGPGGTRALMTAIMGSGPGMKGGPYKLLKSLRLWRANCGDDGAAAIAEVLRLGGADVALTYLELLDNNISIRGATALGSSLSFGHNISLLTLKLDYNQTLGDDGLVALCRGLRTNMSLRQLHLQFCNLTSASGHALADLLANSRSALEVLNVAGNRLTGQGVYVLCTKGLVVNTKCETLNLSDNLIDQLEEDLAGLTALRDCLMTSTSGLTSVDLMYNRIGERGGLVLVEALESEG-CKIKEFLVDLTLPMPLFEKLFKKAGG 292
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A8J2X6V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X6V8_9STRA) HSP 1 Score: 261 bits (666), Expect = 4.890e-79 Identity = 155/345 (44.93%), Postives = 204/345 (59.13%), Query Frame = 1
Query: 37 KKKGA---DGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATM-SCSTLTHIDLLYNRIGERCARIMLPAL-------APENESKIKHFLVDATLPTALFEALHRKDSG 1038
KKKG D + +P ++ NY +Y +L + + K++AQL DE Q + K Q+V+D E LGP GTRAL TA+MG M G +++ ++ R WR CGD+GA +AE+LRLGGAE+ + YLE+ D +G GA ALGQ+L G N SL +LKLD+N LGS+G ALC+GLRTN+SLKQLHL YC L DAGAPLGE+LS+ K L L+LQGN++ G + G+ N L YLSL+DN I + D D ALE S L+ +DLL+NRIGE+ A ML A + KI+ VD +LP LF L R D+G
Sbjct: 4 KKKGGSAIDPDDPSMNPEAVVDNYKKYCKLAALTPHPKVLAQLGGDEE----QLEIMMKNE-----QLVIDGEP-VLGPHGTRALCTALMGNAPGMSGAVFKMAKNFRFWRMDCGDDGAACLAEILRLGGAELPMAYLEMLDCGVGYRGAHALGQSLMCGQNRSLLTLKLDYNSSLGSDGCKALCQGLRTNASLKQLHLCYCGLDEDAGAPLGEVLSYAKTTLQKLHLQGNKMRGGGLSGILSGMDNNNKLEYLSLADNAIAATDEDLEALEQLAGVMQRETSLLSQVDLLHNRIGEKGANTMLAAFNGGELEGSKGPPGKIQMLQVDHSLPDQLFNTLGRLDAG 338
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A7S2XX61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX61_9STRA) HSP 1 Score: 231 bits (590), Expect = 7.680e-70 Identity = 125/211 (59.24%), Postives = 151/211 (71.56%), Query Frame = 1
Query: 10 MGPKKKKKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDE-NRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDL 639
M PKKK KKK VQGEDP LLQNYV++S+LI I VN +IV D+E P+ Q+VVDD G LGPGGTRAL TAI+GTG M+GG Y+ ++SLRLWR + GD+GA+ +AE+LRLGG +V + YLELFD+ IGP GA+ALG ALS G N SL +LKLD+N LG+EG AALCRGLRTNS+LKQLHLPYC+L
Sbjct: 1 MAPKKKGDKKKKQDVEGVQGEDPAILLQNYVKFSKLIAIPVNQQIVDTCSDEELEGPVE--------------QLVVDDRKGVLGPGGTRALCTAILGTGPGMQGGPYKKLKSLRLWRCNVGDDGAQCMAELLRLGGGDVVIPYLELFDNNIGPRGALALGNALSFGTNQSLMTLKLDYNISLGAEGTAALCRGLRTNSTLKQLHLPYCNL 197
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A7S1XUG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG2_9STRA) HSP 1 Score: 241 bits (616), Expect = 7.520e-69 Identity = 151/346 (43.64%), Postives = 205/346 (59.25%), Query Frame = 1
Query: 10 MGPKKK--KKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIM---GTGQDMRG-GSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAV-ALEDFRDATMSCSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHR 1026
MGPKKK KKA G E + +PL L N+ + + IG N +VAQLQ +E SK TQI++D E P+GP G RAL TA++ GT + G G Y + SLR+W GD+G ++AE+LRLGGAEV++ YLEL D + P GA LG+ALS G N SL +LKL+ N LGS G AALCRGLR+NS LKQLHL +C++GPD G PL E LS+++ L VL ++GNRL G R L+ G+ N+SL L +SDN I + + L F A + +TL +++++YNR+ + + PA+ E + FLVD L L+ AL +
Sbjct: 250 MGPKKKGGKKAAPAGDGKEDESANPLTLCTNFTKICKTIGQQPNPGLVAQLQSEE---------FSK------TQIIIDGEP-PIGPAGMRALATAVLAPPGTPGLVAGCGPYTPLSSLRVWGGGLGDDGVSAVAEILRLGGAEVKISYLELLDSGVSPYGARMLGRALSYGSNMSLLTLKLNCNLNLGSAGVAALCRGLRSNSVLKQLHLEFCNIGPDGGGPLAEALSYSRTALQVLCMKGNRLGNVGLRDLATGIQLNQSLTTLDVSDNAINGYTFEEIDCLAAFAQAVKASTTLANVNIMYNRLTDGGGEALKPAV--EGNGTLGTFLVDTQLSEELYAALFK 577
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A7R9U7G5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G5_9STRA) HSP 1 Score: 224 bits (572), Expect = 2.390e-65 Identity = 133/320 (41.56%), Postives = 196/320 (61.25%), Query Frame = 1
Query: 85 LLQNYVRYSRLIGIAVNLKIVAQLQ-DDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTG--QDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMS---CSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHR 1026
+L+N+ RL+ +N +I++QL DE+ + ++IVV+ + L PG RAL A++ M G Y +++L++WR++ G G +IAE+LRLGGA++QL LEL D + GA+ALG++L+ G N SL L+LD+NP +GSEG AAL RGLRTN SL++LH +C LGP+AG L ++L F++ L VLN+QGNRLE G ++ GL N +L+ L+++DN IG+ + D VAL S S LT +DL +NRIG +++P L N+ +IK FLVD ++P +F ALHR
Sbjct: 11 VLRNFKCMCRLLNEDINQEILSQLSISDEDAKKGKG----------VSEIVVEAD---LTPGNARALAAALLAPPGMSKMLGDVYTALKTLKIWRSNLGASGVSAIAELLRLGGADLQLALLELVDAGVEIDGAVALGRSLATGMNVSLRILRLDYNPGIGSEGIAALSRGLRTNRSLEELHACFCSLGPEAGVFLADILEFSQSSLRVLNVQGNRLEGVGLNDVAHGLMENSALLELNVADNAIGNSELDVVALRVLAQVISSGNPISALTSVDLQHNRIGFEGGSVLVPCLQANNK-RIKTFLVDFSIPAEIFTALHR 316
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A7S2G5E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5E5_9STRA) HSP 1 Score: 222 bits (565), Expect = 8.050e-64 Identity = 146/345 (42.32%), Postives = 190/345 (55.07%), Query Frame = 1
Query: 7 SMGPKKKKKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMSCST-LTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHRKDSG 1038
+M PKKK AKK A+ + GEDP L Y ++ ++ I +I D+EN Q + H +E +D LGPGGTRAL TAIMGTG M ++ ++SLR+W ++ GD+G +++AE+LRLGGAE+Q+ YL GLRTNSSLKQLHLPYC+L G PL EMLS+T+L L +LNL+GN++ +G L PGL +++SLV L LSDN I G+ D AL F A M S L +I LLYNRIGE A +LPAL P N+ +I+ FLVD TLP LFEAL R +G
Sbjct: 34 TMPPKKKDGAKKSNAEPDP-GEDPETFLAQYKKFCKMTAIPECEQITQAFSDEENPYAGQFVI----HPNE----PMDPTEPRLGPGGTRALATAIMGTGPGMVT-PFKSVKSLRIWWSNIGDDGCQALAELLRLGGAEIQINYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRTNSSLKQLHLPYCNLDSAVGQPLSEMLSYTRLGLTMLNLKGNQIRGQGLLELCPGLEKSKSLVDLDLSDNDI--GEQDIEALNAFAVALMMPSVALANISLLYNRIGEAGANALLPALDPSNK-RIQQFLVDETLPPPLFEALSRVSAG 365
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Match: A0A485LQC0_9STRA (Aste57867_24124 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQC0_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.730e-59 Identity = 130/339 (38.35%), Postives = 186/339 (54.87%), Query Frame = 1
Query: 10 MGPKKKKKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQDDENRPLSQARLSSKYHRDEYTQIVVDDEHGPLGPGGTRALTTAIMGTGQDMRGGSYRLIRSLRLWRAHCGDEGARSIAEVLRLGGAEVQLEYLELFDDKIGPIGAMALGQALSIGCNTSLYSLKLDFNPLLGSEGAAALCRGLRTNSSLKQLHLPYCDLGPDAGAPLGEMLSFTKLKLAVLNLQGNRLEAEGTRTLSPGLARNRSLVYLSLSDNGIGSGDADAVALEDFRDATMSCSTLTHIDLLYNRIGERCARIMLPALAPENESKIKHFLVDATLPTALFEALHR 1026
MGPK K KK + E G ++ +Y + R IG+ +N A + D + + ++ Q+++D++ G LG GG RA+ A +GT G Y + ++R+W GDEGA +IA +L G V + Y+EL D IGP G L AL L +LKL+ N +G +G AALC+GL TN+++KQLHL +C + L ++LS K L L+LQGN L EG LS GL R+ SLV L+LSDNGI D AL FRDA ++C TLT + +N I A I+LPAL ++ +++K F VD +LP +F+ L+R
Sbjct: 1 MGPKAKSAKTKKEPEAEDNGVTRPMVVASYTKMCRAIGVPIN----AHMSD-------MIKGKGEEADEKLAQVMIDEDFGALGNGGIRAMACAFLGTVPHSNTGPYMHLANVRVWNNPIGDEGASAIASLLCEGNNLVNILYVELMDCDIGPEGCTMLADALKAEKKAPLQALKLNCNSKIGDDGVAALCQGLFTNTTIKQLHLEFCKITSAGTIVLAQLLSMAKSGLQSLSLQGNLLGDEGLLHLSKGLKRSHSLVKLNLSDNGI---RKDVAALTAFRDAIVACKTLTSVKFSFNLIDIEGADILLPALESDDGARLKCFEVDPSLPPEVFKKLNR 325 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig644.17366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig644.17366.1 >prot_F-serratus_M_contig644.17366.1 ID=prot_F-serratus_M_contig644.17366.1|Name=mRNA_F-serratus_M_contig644.17366.1|organism=Fucus serratus male|type=polypeptide|length=363bp MGPKKKKKAKKKGADGEVQGEDPLQLLQNYVRYSRLIGIAVNLKIVAQLQback to top mRNA from alignment at F-serratus_M_contig644:45055..54196+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig644.17366.1 ID=mRNA_F-serratus_M_contig644.17366.1|Name=mRNA_F-serratus_M_contig644.17366.1|organism=Fucus serratus male|type=mRNA|length=9142bp|location=Sequence derived from alignment at F-serratus_M_contig644:45055..54196+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig644:45055..54196+ >mRNA_F-serratus_M_contig644.17366.1 ID=mRNA_F-serratus_M_contig644.17366.1|Name=mRNA_F-serratus_M_contig644.17366.1|organism=Fucus serratus male|type=CDS|length=2178bp|location=Sequence derived from alignment at F-serratus_M_contig644:45055..54196+ (Fucus serratus male)back to top |