mRNA_F-serratus_M_contig6430.17361.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE) HSP 1 Score: 116 bits (291), Expect = 3.520e-27 Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + + VPV Q E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 43 WRRRFLAYVDNHNLQHTIFGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 224
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE) HSP 1 Score: 116 bits (291), Expect = 6.700e-27 Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + + VPV Q E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 43 WRRRFLAYMDNHDLQHTIFGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 224
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 116 bits (291), Expect = 7.190e-27 Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + + VPV Q E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 115 WRRRFLAYVDNHNLQHTIFGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 296
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 116 bits (291), Expect = 7.590e-27 Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + + VPV Q E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 115 WRRRFLAYVDNHNLQHTIFGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 296
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5L646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L646_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.320e-26 Identity = 69/183 (37.70%), Postives = 108/183 (59.02%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + + VPV Q E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +LE I+ DEDPKL+F RV QL T+LR+ + K+EQ++V ILVR L +++EKR+ L L R +++ +VR +AT K ++
Sbjct: 115 WRRRFLAYVDNHNLQHTIFGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELENITMSDDEDPKLFFSRVAQLETKLRAAGIAKSEQEVVQILVRQLPARFDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 296
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5KWA2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWA2_9PHAE) HSP 1 Score: 110 bits (275), Expect = 8.150e-26 Identity = 65/183 (35.52%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W F A++D L + + + VPV Q E L QYG + V + + W+ +L+A G E+++ S +V +AW + +W PS A+ LL +L+T++ DE+PKL+ RV QL T+LR++ + K+EQ++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 115 WRRCFLAYVDNHNLQHTISGS-AEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGGPLENKMYSCHSVAEAWRMMADWFLPSHPADCQLLVAELDTVTMNNDENPKLFCSRVAQLETKLRAVVIAKSEQEVVQILVRQLPARYDVEKRTSLPKRDLTRAELQDVVRGRYATLKASEM 296
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.020e-25 Identity = 66/183 (36.07%), Postives = 108/183 (59.02%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
W RF A++D L + + VPV Q + LI QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DE+PKL+F RV QL T+LR++ + K++Q++V ILVR Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 115 WRRRFLAYVDNHNLQHTFFGS-AEVPVVSCQDKGYLIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDDITMSDDENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 296
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5JFE5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE5_9PHAE) HSP 1 Score: 107 bits (268), Expect = 8.510e-24 Identity = 57/148 (38.51%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 103 LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W PS + LL +L++I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+ L L R +++ +VR +AT K ++
Sbjct: 62 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPSHPGDCQLLVAELDSITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEM 209
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5K6G7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 3.150e-23 Identity = 55/154 (35.71%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 85 KGNQRELILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRSRLDSPFLRRQDVEHIVRASWATRKTRQL 546
+G++ L +YG + + + W+ +L+ GA FE+ + S +V +AW + +W P A+ LL +L ++ DEDPKL+F RV QL T+LR++ + K+EQ++V ILVR L Y++EKR+ L +L R +++ +VR +AT K ++
Sbjct: 197 RGDEGSLTRRYGAQLDVEHKRTWSFILETAVGAPFENNLYSCHSVAEAWRMMEDWFLPHHPADCQLLVAELANVTMNDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVQILVRQLPARYDVEKRTSLSKRYLTRAELQDVVRGRYATLKASEM 350
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE) HSP 1 Score: 102 bits (255), Expect = 4.810e-22 Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 4 WHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRE--LILQYGEEPVQQAQAAWACLLDATAGAAFEDRVLSAMTVRDAWSQVLNWTGPSSEAEKLLLERQLETISNYGDEDPKLYFFRVDQLLTRLRSIDVHKTEQKIVNILVRNLSDHYEIEKRS 462
W RF A++D L + + + VPV + E L QYG + V + + W+ +L+A GA FE+ + S +V +AW + +W P+ A+ LL +L+ I+ DEDPKL+F RV QL T+LR++ + K++Q++V ILVR L Y++EKR+
Sbjct: 115 WRRRFLAYVDNHNLQHTIFGS-AEVPVVSCKDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRT 268 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6430.17361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6430.17361.1 >prot_F-serratus_M_contig6430.17361.1 ID=prot_F-serratus_M_contig6430.17361.1|Name=mRNA_F-serratus_M_contig6430.17361.1|organism=Fucus serratus male|type=polypeptide|length=185bp LWHLRFRAHLDGMGLGYALDQTDTSVPVKGNQRELILQYGEEPVQQAQAAback to top mRNA from alignment at F-serratus_M_contig6430:15473..16027+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6430.17361.1 ID=mRNA_F-serratus_M_contig6430.17361.1|Name=mRNA_F-serratus_M_contig6430.17361.1|organism=Fucus serratus male|type=mRNA|length=555bp|location=Sequence derived from alignment at F-serratus_M_contig6430:15473..16027+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6430:15473..16027+ >mRNA_F-serratus_M_contig6430.17361.1 ID=mRNA_F-serratus_M_contig6430.17361.1|Name=mRNA_F-serratus_M_contig6430.17361.1|organism=Fucus serratus male|type=CDS|length=1110bp|location=Sequence derived from alignment at F-serratus_M_contig6430:15473..16027+ (Fucus serratus male)back to top |