mRNA_F-serratus_M_contig643.17360.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A6H5JK18_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK18_9PHAE) HSP 1 Score: 746 bits (1927), Expect = 4.850e-252 Identity = 480/1075 (44.65%), Postives = 579/1075 (53.86%), Query Frame = 1
Query: 1 VSAVSGDLYVCPFLFDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQVGETAMEDWARALAARPFGEDAVGWEVKVCNEEDNTWHQGLVVEYAHSSYRVEYPDGSSRWESEQRTQGPWHRRGNSRLFFIGRLHDSIA---GGNNHITXXXXXXXXSCGK-TPARPSMSSVSGGM--WGQLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSVEEQEPKQEGDDGDKVFVEGAAGGGVRGVGAGGGVEAKF----GEERWERLQSSRQR-LGQGRLSVRLIHRLRRSATASVCRIFWSPCSRFILSCLEEPHGDPFEPR--RLWDATLGSWLSRCRSQPFDVHAAWLPDGHHFVAGLEIHRDVSDVNAPFSQTLAIRRRP-------NLAPIITCGDA-VEARTFGPR---DRPRGRPG---------------------------RVDSSCMASSPKPSGKAVPGAGRTAEEVGGVMWVDPAVEDDRASIGGDGMVIAAGAGEAARTVFVVKYSEWHVLSWRCCSPPSTSPSTRRPLVSRGAPLRIPTVVS----GCRQGRYGQHFQQSMDQPGKIAGPARAQLNRENDISSLSPLALENLVLQDGFGRELLQPASGSASDLPDSGAM------VTPAVAVASSGESIAVPTILPPLFYFHPNHPVHDGGG---WGGLGS----APDDDWMPDAGESHNDGGLSAGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVDGGVQWVVEGSQTIHTADEADMPLVGEIRLNLGRNFGHFFQMSTSGQWACIATGKTPLMCHRIAFIPLHGPKLPPPPNTPASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------VECGGAILSLSISRDDKFAMANVRPFTDGALERLQNTAEALHVAPDISNEVELQVWDVETKKLLFKLGGHHAFTTKECPFLIFAEQSAADPFGDYVCSGSEEHQVYVWHLRHRLLLQCMKGHDNVVNSVSWNPKIPGVLASCSDDGTAIIWGPKVR 3003
VS VSGD YVCPFLFDFLT+ E+GRAA VC WR A DDELWR+ Y RTQVGE ME+WA++LAARPF EDAVGWEV+V +EED W GLVV Y+ Y VEY DGSSRWESE RT+GPWHRRGNSR+ F+GRLHDS+A GG + + PA + + W +LRHGRW+EE+KAN CHVPAVELV+L DHTDEVLDLKFSPDGT LATCSRDMSIL+Y++E P+ G +G R AG G + R ++ R LG L VRLIHRLRRSATASVCRIFWSPC RFILSCLEEP+G+PF P LWDA G +SRCRSQPFDVHAAW+PDG HFVAGL++ D +D P++QT AIRRRP + P + A +EA G D R G R D++ A + + P G G + G M ++ G G LS+ C S+S T L+ G + + V G + G G + G++AG E S + ++ G G PA + LP+ A S G S + PT L P+ + WG LG AP + + + DGG + G XXXXXXX +GGV+WV++G + I D+A+MPLV E+RLNL RNF HFFQMS SG WAC+ATG TP+MCHR+AFIPL PP +T T VECGGA+LSLS++RDD+F M NVRPF GAL++L E H AP+ISNE+ELQVWDV TKKL FKLGGHHAFTTK+CPFLI A QSAADPFGDYVCSGSEEH+V+VWHLRHRLLL +KGH++VVNSVSWNPK PG+++SCSDDGTAIIWGP+VR
Sbjct: 18 VSVVSGDEYVCPFLFDFLTISELGRAASVCSTWRTNAADDELWRDIYERTQVGEAGMEEWAQSLAARPFEEDAVGWEVEVLSEEDVMWTPGLVVAYSGGRYLVEYVDGSSRWESEYRTEGPWHRRGNSRISFLGRLHDSLADADGGAAAVANTHPSAPPDSSRGAPAAAEKAGETRSFPNWPRLRHGRWREEVKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTLLATCSRDMSILVYAIEAM-PENHGS-----LKKGGKDRSPRKARAGXXXXXXXXXDTGVDEMPRDGQNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPNGNPFNPSTSELWDARHGQCISRCRSQPFDVHAAWMPDGEHFVAGLDLTWDETDDTVPYTQTFAIRRRPTPSTRRGSTTPASSASKAAIEAHGLGSGMAIDANSARAGHDXXXXXXXXXDVEHRGLSNTYEYKRGRTDTTTAALTADLAAAXXPAEGSNV--AGXXXXXXXXXXXXXHAEGRSAMGVSEGVGWGEEA-----------LSFSPCLSSSSSTLT---LLHLGEAQQSASGVGDPAWGGKAGGGGSAVSLPVAAKGEVAGIMLVDPGLEGKGSPDQASVTDETAVETGGGSREGLPAHDLSVSLPEEAAAPXXXXXXXXXXXXTSFGSSCS-PTPLEPVSRSRGGSSIEGEEAMQPWGCLGGDSPPAPLIQYPFEPSAASGDGGHANGGEGGVLFDLNVGVGIAAVDDXXXXXXXENE--------------------EGGVEWVMQGGEVIAQVDDAEMPLVAEVRLNLRRNFAHFFQMSNSGLWACVATGDTPMMCHRVAFIPLMEATASPPKSTSTRPAAMSPGDPGGSDDDDGSGNDEKDVFIHVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSLSLTRDDRFIMVNVRPFMKGALDKLYRP-EGRHTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 1048
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: D7G5J6_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J6_ECTSI) HSP 1 Score: 599 bits (1544), Expect = 1.580e-195 Identity = 455/1086 (41.90%), Postives = 545/1086 (50.18%), Query Frame = 1
Query: 1 VSAVSGDLYVCPFLFDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQVGETAMEDWARALAARPFGEDAVGWEVKVCNEEDNTWHQGLVVEYAHSSYRVEYPDGSSRWESEQRTQGPWHRRGNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPA-----RPSMSSVSGGM-----WGQLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSVEEQEPKQEGDDGDKVFVEGAAGGGVRGVGAGGGVEAKFGEERWERLQSSRQR-LGQGRLSVRLIHRLRRSATASVCRIFWSPCSRFILSCLEEPHGDPFEPR--RLWDATLGSWLSRCRSQPFDVHAAWLPDGHHFVAGLEIHRDVSDVNAPFSQTLAIRRRP-------NLAPIITCGDA-VEARTFG---------------PRD-------------------------RPRG-------RPGRVDSSCMASSPKPSGKAVPGAGRTAEEVGGVMWVDPAVEDDRASIGGDGMVIAAGAGEAARTVFVVKYSEWHVLSWRCCSPPSTSPSTRRPLVSRGAPLRIPTVVS----GCRQGRYGQHFQQSMDQPGKIAGPARAQLNRENDISSLSPLALENLVLQDGFGRELLQPASGSASDLPDSGAMVTPAVAVASSGESIAVPTILPPLFYFHPNHPVHDGGGWGGLGSAPDDDWMPDAGESHNDGGLS----AGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVDGGVQWVVEGSQTIHTADEADMPLVGEIRLNLGRNFGHFFQMSTSGQWACIATGKTPLMCHRIAFIPLHGPKLPPPPNT---PASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------VECGGAILSLSISRDDKFAMANVRPFTDGALERLQNTAEALHVAPDISNEVELQVWDVETKKLLFKLGGHHAFTTKECPFLIFAEQSAADPFGDYVCSGSEEHQVYVWHLRHRLLLQCMKGHDNVVNSVSWNPKIPGVLASCSDDGTAIIWGPKVR 3003
VS V GD YVCPFLFDFLT+ E+GRAA VC WR A DDELWRE Y +RTQGPWHRRGNSRL F+GRLHDS+AG + TPA P+ + +G W +LRHGRW+EELKAN CHVPAVELV+L DHTDEVLDLKFSPDGTRLATCSRDMSIL+Y++E P+ G + +G G G + R ++ R LG L VRLIHRLRRSATASVCRIFWSPC RFILSCLEEPHG+PF P LWDA G LSRCRSQPFDVHAAW+PDG HFVAGL++ D +D P++QT AIRRRP + AP + A +EA G +D RG + G +D++ A + + A P G V GV A + G M ++ G G +S+ C S+S T L+ G + T V G + G G + G++AG E S + ++ G G PA + LP+ A+ P+ P F P PV GG G W G+SH + ASS XXXXXXXXXXX XXXXXXXXXXX +GGV+WV++G + I D+ + FF S SG WAC+ATG TP+MCHR+AFIPL + PP +T PA+ XXXXXXXXXXX T VECGGA+LSLS++RDD+F M NVRPF GAL++L E H AP+ISNE+ELQVWDV TKKL FKLGGHHAFTTK+CPFLI A QSAADPFGDYVCSGSEEH+V+VWHLRHRLLL +KGH++VVNSVSWNPK PG+++SCSDDGTAIIWGP+VR
Sbjct: 3 VSVVGGDEYVCPFLFDFLTISELGRAASVCSTWRTNAADDELWREIY--------------------------------------------------------------------ERTQGPWHRRGNSRLSFLGRLHDSLAG--QDADGGAAAVSNTPPSTPADSSRGAPAAAEKAGETRSFPDWPRLRHGRWREELKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTRLATCSRDMSILVYAIEAM-PENHGSSKEGEKDDGPRKARASGXXXXXXXXXXXGVDEMPRDGQNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPHGNPFIPSSSELWDAWHGQRLSRCRSQPFDVHAAWMPDGEHFVAGLDLTWDETDDTVPYTQTFAIRRRPTPITRGGSTAPASSASKAALEAHGLGGGMAISAISANAARLEQDSIAXXXXXXXXXXXXXXXXXXXXGVEHRGLSSTHEHKRGSIDTTAAALTDDFAAAAAPAEG---SNVAGVSKPSAAXXXXGHAEGPSAMGVSEGVGWGEEA-----------MSFSSCLSSSSSTLT---LLHLGEAQQSATGVGDPAGGGKAGEGGSAASIPVSATGEVAGIMWVDPGLEGKGSPAQASVTDETAVESGGGPREELPAHDMSVSLPEEEAVAPAGAXXXXXXXXXXXPSFGSP-FSPPPLEPVSSHGGSSNEGEETMQPWGCLGGDSHPTPLIQYPFEPSASSGXXXXXXXXXXXGGLFDLNVGVGIAAVEGXXXXXXXXXXXDE-----EGGVEWVMQGGEVIAQVDDGGDAAGRRGSAQPSQELRAFFP-SNSGSWACVATGDTPMMCHRVAFIPLGEARASPPKSTSTRPAAISPGDPGVSDXXXXXXXXXXXEKDVFIRVLRSGSGGDAASLQPKVTARRMEAVECGGAVLSLSVTRDDRFIMVNVRPFMKGALDKLHRP-EGRHTAPEISNEIELQVWDVATKKLAFKLGGHHAFTTKDCPFLIMAAQSAADPFGDYVCSGSEEHRVFVWHLRHRLLLGVLKGHEDVVNSVSWNPKYPGMMSSCSDDGTAIIWGPRVR 992
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A813J8U8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J8U8_POLGL) HSP 1 Score: 123 bits (309), Expect = 5.160e-27 Identity = 80/235 (34.04%), Postives = 119/235 (50.64%), Query Frame = 1
Query: 40 LFDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQVGETAM----EDWARALAARPFGEDAVGWEVKVCNEEDNT-WHQGLVVEYAHS--SYRVEY------PDGSSRWESEQRTQGPWHRRGNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPARPSMSSVSGGMWGQLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSV 705
+F F V+++G R+W+ A+ +W + Y RTQ + + E R+L RPFGEDAVGWEV V E+ + + G +V Y SY V+Y P G RWE E+R + R + S+ G + + G + + S+ ++G HG WK+EL+ N C+ P+ L RL++H DEVL + FSP GTRLA+CSRD+ +I+ V
Sbjct: 38 IFRFCGVQDLGACLAADRSWKAVADAHHVWADAYDRTQCVDASSAPNGEGLLRSLIERPFGEDAVGWEVAVLIEDGSERYSTGHIVAYRPEIDSYLVDYGSSSGLPGGDRRWEQERRKRTAAMRH-----------NPSLLGKSRFNFLSPPKPLAATGGSSSSSSLPRLAG------CHGSWKQELEHNVCNAPSRLLTRLLEHKDEVLFVVFSPCGTRLASCSRDLRTVIFKV 255
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A812UCT2_SYMPI (PAP13 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UCT2_SYMPI) HSP 1 Score: 113 bits (282), Expect = 1.800e-23 Identity = 79/240 (32.92%), Postives = 116/240 (48.33%), Query Frame = 1
Query: 40 LFDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQ-VGETAM---EDWARALAARPFGEDAVGWEVKVCNEEDN----TWHQGLVVEYA--HSSYRVEYPDGSSR-------WESEQRTQGPWHRRGNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPARPSMSSVSGGMWGQLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSVE 708
+F F ++R++G + V R WR A + +W + Y RTQ V +++ E+ R+L RPFGEDAVGW V V E+ ++ G VV Y+ +Y + Y ++ WE E+R + R S G+ S H+ S + + LR G WKEELK N P L +L DH+DEVL + FSP GTRLA+CSRD+ +++ V+
Sbjct: 29 IFRFCSIRDLGASLAVDRHWRAAVDSHHVWADAYDRTQRVDDSSAPSGENLLRSLIERPFGEDAVGWHVAVLAEDHGYSTERYYAGRVVAYSVETDTYLIAYDTEGAQADQPNMHWEQERRKRTAAMRHNPS---LAGKSRFSFLSPPPHLPKSGAAYSSSVAHAEPSQKVRARDERSREPLR-GSWKEELKHNVLQAPTQMLTQLNDHSDEVLFVVFSPCGTRLASCSRDLQTIVFKVQ 264
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A813B4T2_SYMMI (Wdr26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B4T2_SYMMI) HSP 1 Score: 113 bits (282), Expect = 1.110e-21 Identity = 82/250 (32.80%), Postives = 119/250 (47.60%), Query Frame = 1
Query: 40 LFDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQ-VGETAM---EDWARALAARPFGEDAVGWEVKVCNEE----DNTWHQGLVVEYAHSS--YRVEYPDGSSR------WESEQRTQGPWHRRGNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPARPSMSSVSGGMWGQLRH-----------GRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSVE 708
+F F ++R++G + V R WR A + +W + Y RTQ V +++ ED R+L RPFGEDAVGW V V E+ + ++ G VV Y+ + Y + Y WE E+R + R S G+ S H+ K+ A S S+ S G + G WKEELK N P L +L +H+DEVL + FSP GTRLA+CSRD+ +++ V+
Sbjct: 341 IFRFCSIRDLGASLAVDRNWRAAGDSHHVWADAYDRTQRVDDSSAPSGEDLLRSLIERPFGEDAVGWHVAVLAEDHGYSNERYYTGRVVAYSAETDTYLIAYDSEGQEDQPHMHWEQERRKRTAAMRHNPS---LAGKSRFSFLSPPPHLP-----------KSGAVSSSSTASAGPLQKAARPRDERPREPLRGSWKEELKHNVLQAPTHMLTQLNEHSDEVLFVVFSPCGTRLASCSRDLQTIVFKVQ 576
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A7S0B5Y1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B5Y1_9DINO) HSP 1 Score: 105 bits (262), Expect = 2.850e-21 Identity = 87/260 (33.46%), Postives = 119/260 (45.77%), Query Frame = 1
Query: 4 SAVSGDLYVCPFL-------FDFLTVREVGRAACVCRAWREAAEDDELWREQYARTQVGETAM----EDWARALAARPFGEDAVGWEVKVCNEEDNT-WHQGLVVEY--AHSSYRVEYP---DGS----SRWESEQRTQGPWHRR-----GNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPARPSMSSVSGGMWGQLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSV 705
SA++ D ++ L F F +V ++G V + W + +W + Y RTQ ++A E RAL RPFGEDAVGW V V E+ + G +V Y +Y + Y DGS WE E+R + R G SR F+ G TP SS S W LR WK+EL+ N + P+ L+RL +H DEVL + FSP GTRLA+CSRD+ +I+ V
Sbjct: 24 SALAADQFILDVLDPAWLDVFRFCSVPDLGACLSVSKCWHNVTDAHHVWADAYERTQRVDSASAPAGEGELRALIERPFGEDAVGWRVAVLVEDGTERYATGHIVSYNAEADAYLIAYEEESDGSRSPREAWEQERRKRTAAMRHNPSLAGKSRFSFLS-------------PPALDWRQPLGGLTPH--GRSSGSSRRW-PLRFRSWKQELENNVRNAPSRLLLRLEEHADEVLFVVFSPCGTRLASCSRDLRTVIFRV 267
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: S4RAG9_PETMA (Uncharacterized protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RAG9_PETMA) HSP 1 Score: 89.0 bits (219), Expect = 5.010e-17 Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 2554 ILSLSISRDDKFAMANVRPFTDGALERLQNTAEALHVAPDISNEVELQVWDVETKKLLFKLGG--HHAFTTKECPFLIFAEQSAADPFGDYVCSGSEEHQVYVWHLRHRLLLQCMKGHDNVVNSVSWNPKIPGVLASCSDDGTAIIWGP 2994
I++ S+S+DD+ A+ NV + +H+ WD+ + L+ K G +T C P D+V SGSE+H+VYVWH + + + GH V+ VSWNP++P +LAS SDDGT IWGP
Sbjct: 7 IMTFSVSKDDRLALINV-------------ATQGVHL------------WDLHERALVRKYQGITQGLYTIHSC---------FGGPNEDFVASGSEDHKVYVWHRKQEQPVAVLAGHTRAVSCVSWNPRVPSMLASASDDGTVRIWGP 121
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: UPI0012ED789C (WD repeat-containing protein 26-like isoform X2 n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012ED789C) HSP 1 Score: 85.9 bits (211), Expect = 7.430e-16 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 2554 ILSLSISRDDKFAMANVRPFTDGALERLQNTAEALHVAPDISNEVELQVWDVETKKLLFKLGG--HHAFTTKECPFLIFAEQSAADPFGDYVCSGSEEHQVYVWHLRHRLLLQCMKGHDNVVNSVSWNPKIPGVLASCSDDGTAIIWGP 2994
I+S ++S++ + A+ NV + +H+ WD++ + L+ K G +T C F + D++ SGSE+H+VY+WH R L + + GH VN VSWNP +PG+LAS SDDGT IWGP
Sbjct: 13 IMSFTVSKNGRLALLNV-------------ATQGVHL------------WDLQDRVLVRKYQGVTQGFYTIHSC----FGGHNE-----DFIASGSEDHKVYIWHRRSELPIAELTGHTRTVNCVSWNPVLPGLLASASDDGTVRIWGP 127
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: A0A0G4EZM2_9ALVE (F-box domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4EZM2_9ALVE) HSP 1 Score: 94.4 bits (233), Expect = 8.680e-16 Identity = 78/236 (33.05%), Postives = 108/236 (45.76%), Query Frame = 1
Query: 58 VREVGRAACVCRAWREAAEDDELWREQYARTQVGE--TAMEDWARALAARPFGEDAVGWEVKVCNEEDNTWHQGLVVEYAH----------SSYRVEYPD---GSSRWESEQRTQGPWHRRGNSRLFFIGRLHDSIAGGNNHITXXXXXXXXSCGKTPARPSMSSVSG--GMWG--QLRHGRWKEELKANACHVPAVELVRLMDHTDEVLDLKFSPDGTRLATCSRDMSILIYSVE 708
V + A C + A ++ LW Y RTQ + + +L +RPFG DA+GW V V NE T+ +G VV++ S + V Y D G+ +WE+E+R Q W+ G SR F + D +G XXXXXXX G +W + R W+ K P L+ +M H DEVL + FS G +TCSRD S+L+YSVE
Sbjct: 21 VASILNVAQTCTYLKTATDNALLWLMLYERTQTAHPRAGVCEKLLSLISRPFGRDAIGWSVSVLNEATKTYREGKVVDFKTENIPSGFAMVSYFGVLYEDDETGTVQWETEERQQDRWYNAGKSRFIFKSKDEDG-SGCRKKGASXXXXXXXXXXXXXXXXXXXXXXGVFPLWSLRETRETDWRALTKQTFTGAPRKLLLDVMQHKDEVLHVAFSDCGRFFSTCSRDRSVLVYSVE 255
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Match: F6UT94_MOUSE (WD repeat-containing protein 26 (Fragment) n=2 Tax=Mus musculus TaxID=10090 RepID=F6UT94_MOUSE) HSP 1 Score: 84.7 bits (208), Expect = 8.930e-16 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 2692 LQVWDVETKKLLFKLGG--HHAFTTKECPFLIFAEQSAADPFGDYVCSGSEEHQVYVWHLRHRLLLQCMKGHDNVVNSVSWNPKIPGVLASCSDDGTAIIWGP 2994
+ +WD++ + L+ K G +T C F + D++ SGSE+H+VY+WH R L + + GH VN VSWNP+IP ++AS SDDGT IWGP
Sbjct: 7 VHLWDLQDRVLVRKYQGVTQGFYTIHSC----FGGHNE-----DFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGP 100 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig643.17360.1 >prot_F-serratus_M_contig643.17360.1 ID=prot_F-serratus_M_contig643.17360.1|Name=mRNA_F-serratus_M_contig643.17360.1|organism=Fucus serratus male|type=polypeptide|length=946bp MEDWARALAARPFGEDAVGWEVKVCNEEDNTWHQGLVVEYAHSSYRVEYPback to top mRNA from alignment at F-serratus_M_contig643:371571..396202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig643.17360.1 ID=mRNA_F-serratus_M_contig643.17360.1|Name=mRNA_F-serratus_M_contig643.17360.1|organism=Fucus serratus male|type=mRNA|length=24632bp|location=Sequence derived from alignment at F-serratus_M_contig643:371571..396202+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig643:371571..396202+ >mRNA_F-serratus_M_contig643.17360.1 ID=mRNA_F-serratus_M_contig643.17360.1|Name=mRNA_F-serratus_M_contig643.17360.1|organism=Fucus serratus male|type=CDS|length=5676bp|location=Sequence derived from alignment at F-serratus_M_contig643:371571..396202+ (Fucus serratus male)back to top |