mRNA_F-serratus_M_contig643.17359.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig643.17359.1 vs. uniprot
Match: D7G7N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N8_ECTSI) HSP 1 Score: 152 bits (384), Expect = 1.260e-33 Identity = 92/181 (50.83%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 1873 SVMIAKICKQMISHARARDLRLKKRKTDASIEDARQECRDYLESTSQTVTGYWRQQAEDLVERGLQAEDAVAAARERVRALAVEHEEQWQASMDRVQKHATALKRLDNQVRSGRGTFES-KLKVAWQADVEALKINLQKHREGTVASFSSTLANLEKKAKSG-GEAVDSSSIPSLLSRLTM 2409
S+++A+I KQ+++ ++AR R+KKRKTD+++E R ECRDY+ES SQ V+ +WR+QA+DL+E+G QAE+ V AARE VR L ++HE+Q QA+ DRV+K A+ LK L++ G G + KL+ AW + L+ LQKHRE VA FS TL++ +K K G G DS+SI SLLS LTM
Sbjct: 1015 SLILAQIYKQLVAASQARTKRIKKRKTDSAVEATRAECRDYVESVSQAVSEHWRRQAQDLLEQGRQAEEDVVAAREVVRVLTLQHEDQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVARFSVTLSSNKKANKGGRGGGGDSTSIASLLSHLTM 1195
BLAST of mRNA_F-serratus_M_contig643.17359.1 vs. uniprot
Match: A0A6H5L3H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H8_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 4.490e-15 Identity = 63/143 (44.06%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 1921 ARDLRLKKRKTDASIEDARQECRDYLE-------------STSQTVTGYWRQQAEDLVERGLQAEDAVAAARERVRALAVEHEEQWQASMDRVQKHATALKRLDNQVRSGRGTFES-KLKVAWQADVEALKINLQKHREGTVA 2307
AR R+KKRKTD+++E R+ECRDY+E + S Q A+DL+E+G QAE+ V AARE VR L ++HEEQ QA+ DRV+K A+ LK L++ G G + KL+ AW + L+ LQ HRE VA
Sbjct: 573 ARTKRIKKRKTDSAVEATREECRDYVERDGGSNRFDDCYKARSTLPRLQETQSAQDLLEQGRQAEEDVVAAREAVRVLTLQHEEQRQAARDRVEKLASTLKGLESYFGPGPGASSTTKLENAWLGEGVELQQKLQNHRESAVA 715 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig643.17359.1 >prot_F-serratus_M_contig643.17359.1 ID=prot_F-serratus_M_contig643.17359.1|Name=mRNA_F-serratus_M_contig643.17359.1|organism=Fucus serratus male|type=polypeptide|length=698bp MVRGGGPTDKARNDRHFGKVYSAHKNIRSIAEGNADLDAVETTVVGRVGEback to top mRNA from alignment at F-serratus_M_contig643:318666..326103+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig643.17359.1 ID=mRNA_F-serratus_M_contig643.17359.1|Name=mRNA_F-serratus_M_contig643.17359.1|organism=Fucus serratus male|type=mRNA|length=7438bp|location=Sequence derived from alignment at F-serratus_M_contig643:318666..326103+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig643:318666..326103+ >mRNA_F-serratus_M_contig643.17359.1 ID=mRNA_F-serratus_M_contig643.17359.1|Name=mRNA_F-serratus_M_contig643.17359.1|organism=Fucus serratus male|type=CDS|length=4188bp|location=Sequence derived from alignment at F-serratus_M_contig643:318666..326103+ (Fucus serratus male)back to top |