mRNA_F-serratus_M_contig643.17348.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A6H5L4C1_9PHAE (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C1_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.300e-28 Identity = 69/123 (56.10%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 821 RRPSAEDALGTVSRRARSHSRVVEMGTDRAASLPPPSEPAGSSQGSPAT-SCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASRWGWDHKALS 1186
RR AED L T R++ + + + AA PS + PA + ARA+AMVPMRPEEY AQ++ +R+VFDEDTGRWRLV+GTGEIIERIVSR+E IQ+HASRWGWDHK LS
Sbjct: 73 RRNGAEDGLNTDYRQSTATGGFLPSSRNNAAQAQDPSNATTITAERPADMETKAARARAMVPMRPEEYAAQKRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQEQQEIQRHASRWGWDHKTLS 195
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A1Z5KSI4_FISSO (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSI4_FISSO) HSP 1 Score: 73.6 bits (179), Expect = 1.890e-11 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 2
Query: 971 CREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
C++ +A+ M PM EEY AQQ IREV+DE TGR+RLVRGTGEIIE +VSR + I + A+R
Sbjct: 104 CKQEQARRMAPMSREEYQAQQSTIREVYDEQTGRYRLVRGTGEIIESLVSRSQHENINRQATR 166
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S3Y5I9_HETAK (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5I9_HETAK) HSP 1 Score: 65.1 bits (157), Expect = 1.530e-8 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 2
Query: 968 SCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 1129
S ++ R AMVPMR EEY AQQ +RE+ D +TGR RLV+G+GEIIERIVS+ E
Sbjct: 98 SVKKQRRLAMVPMRREEYEAQQSVVREILDLETGRMRLVKGSGEIIERIVSKEE 151
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S4J1R6_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1R6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.650e-8 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 2
Query: 920 PPPSEPAGSSQGSPATSCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 1129
PPP++P+ + + + + A +++MVPM EEY AQ+ IREV+D DTGR RLVRG GEIIERIVSR +
Sbjct: 247 PPPADPSTTEKATTENE-KAAASRSMVPMSREEYEAQRSVIREVYDPDTGRMRLVRGDGEIIERIVSRED 315
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S3LBW5_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBW5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.810e-8 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 2
Query: 998 VPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHAS 1156
PM EEY A + +REV+DE +GR+RLVRGTGEIIERIVSR++ +I + A+
Sbjct: 38 APMTREEYEALRNTVREVYDEQSGRYRLVRGTGEIIERIVSRQDHESINRQAT 90
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: UPI001CF73691 (ADP-ribosylation factor-like protein 6-interacting protein 4 isoform X1 n=2 Tax=Tribolium madens TaxID=41895 RepID=UPI001CF73691) HSP 1 Score: 63.9 bits (154), Expect = 3.670e-8 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 2
Query: 980 ARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
A++KAM PM E++ QQ +R V+DE TGR RL+RG GE+IE IVSR AI Q A+R
Sbjct: 103 AKSKAMAPMTKEQWEKQQNVVRRVYDEATGRHRLIRGDGEVIEEIVSRERHKAINQQATR 162
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: D6WEC8_TRICA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Tribolium castaneum TaxID=7070 RepID=D6WEC8_TRICA) HSP 1 Score: 62.4 bits (150), Expect = 1.040e-7 Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 2
Query: 980 ARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
A++KAM PM E++ QQ +R V+DE TGR RL++G GE+IE IVSR AI Q A+R
Sbjct: 94 AKSKAMAPMTKEQWEKQQSVVRRVYDETTGRHRLIKGDGEVIEEIVSRDRHKAINQQATR 153
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S2XU08_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU08_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.120e-7 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2
Query: 965 TSCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
T ++ R AMVPM E+Y AQQ +REV+D ++GR+RLVRG+GEIIERIVSR I + A+R
Sbjct: 235 TKSKKERVAAMVPMTREQYEAQQAVVREVYDAESGRFRLVRGSGEIIERIVSRDAHAQINRVATR 299
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A2G8KF95_STIJA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KF95_STIJA) HSP 1 Score: 62.4 bits (150), Expect = 1.620e-7 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 2
Query: 974 REARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
RE++A+ + PM EEY +Q R VFD+DTGR RLV+G+GEIIE IVSR AI + A++
Sbjct: 118 RESQARILKPMTKEEYEKEQSVTRRVFDQDTGRTRLVKGSGEIIEEIVSRDRHKAINKQATK 179
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A1B6GJQ9_9HEMI (ADP-ribosylation factor-like protein 6-interacting protein 4 n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GJQ9_9HEMI) HSP 1 Score: 62.0 bits (149), Expect = 1.900e-7 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 2
Query: 983 RAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE*HAIQQHASR 1159
+A++M PM EE+ QQ IR V+DE+TGR RL+RG GEIIE IVSR I + A+R
Sbjct: 112 KAQSMAPMSKEEWEKQQNTIRRVYDEETGRTRLIRGEGEIIEEIVSRERHKEINRQATR 170 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig643.17348.1 >prot_F-serratus_M_contig643.17348.1 ID=prot_F-serratus_M_contig643.17348.1|Name=mRNA_F-serratus_M_contig643.17348.1|organism=Fucus serratus male|type=polypeptide|length=305bp MGRRRERDGEGHHSHRSRSKDARKSFDKEVRNDRRPTISPRPPRGITLSAback to top mRNA from alignment at F-serratus_M_contig643:185588..188807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig643.17348.1 ID=mRNA_F-serratus_M_contig643.17348.1|Name=mRNA_F-serratus_M_contig643.17348.1|organism=Fucus serratus male|type=mRNA|length=3220bp|location=Sequence derived from alignment at F-serratus_M_contig643:185588..188807+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig643:185588..188807+ >mRNA_F-serratus_M_contig643.17348.1 ID=mRNA_F-serratus_M_contig643.17348.1|Name=mRNA_F-serratus_M_contig643.17348.1|organism=Fucus serratus male|type=CDS|length=1830bp|location=Sequence derived from alignment at F-serratus_M_contig643:185588..188807+ (Fucus serratus male)back to top |