mRNA_F-serratus_M_contig641.17330.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig641.17330.1
Unique NamemRNA_F-serratus_M_contig641.17330.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: D7FXF8_ECTSI (NAD(P)H dehydrogenase (Quinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF8_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 7.550e-119
Identity = 167/239 (69.87%), Postives = 193/239 (80.75%), Query Frame = 2 
Query:   35 RRAWPPIVASAVRALNRITTFVPXXXXXXXXXX-KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            R+    ++A A+RALNR+T+FVP           K++VV VHPNGK PSFTLAL  AV DSL+  G++VR+TNLY E FQ A+   E+RG+MTA RDG++ EDVKGHV+DL WCSGLVLCYPTWWYSFPAILKGWLDR  +PGVAFDLPNGV++P P TG ISRLT+I KVGMVTTFGN FWNV+YVGDPGRRI+SRGLRPLFHPECTL+WKGLYDVE   P+ RSAFLEDV  SFR F
Sbjct:   11 RQPLSSLLAGAMRALNRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: A0A835ZJZ3_9STRA (NAD(P)H dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJZ3_9STRA)

HSP 1 Score: 232 bits (591), Expect = 5.380e-72
Identity = 110/225 (48.89%), Postives = 151/225 (67.11%), Query Frame = 2 
Query:   74 ALNRITTFVPXXXXXXXXXXKVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            ALN+ +   P          +VL++  HP  +  S++ AL  AV  +L+  G++VR+ +LY E F+ A+S  E R YMTA+R+G L   V  HVE L W  GLV  YPTWWY+ PAILKGW DR   PG  FD+P+G    +P TG+ISRLT+I+++G+V+T+GN + +VQYVGDPGRR++SRGLR + HP+C+++W GL+ VE  + E RSAFLE VR  F  F
Sbjct:   27 ALNKCSCHFPPARNADGGEQRVLLLYAHPVHEGSSYSCALRDAVVSALKDRGHDVRVADLYAEGFEAALSAEELRTYMTAYREGALAPAVAAHVESLRWAQGLVFVYPTWWYTPPAILKGWFDRCLCPGATFDMPDGTTPTNPNTGVISRLTNIKRIGVVSTYGNQWQHVQYVGDPGRRLISRGLRAICHPDCSVLWLGLHGVETCAQERRSAFLEHVRQEFSWF 251
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: W7TIP7_9STRA (Nad h dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIP7_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.800e-57
Identity = 100/241 (41.49%), Postives = 140/241 (58.09%), Query Frame = 2 
Query:   44 WPPIVASAVRALNRITTFVPXXXXXXXXXXK-VLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMT--AHRDGKLTEDVKG---HVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            W P+      A NR T+F+P          + VL++  HP G   SF  A       SL+  G+EV+  +LY+E FQP M   + R YM   + R  + T D      +++ L WC  L+  YPTWWY+ PAILKGW+DR F+P  AF LP     P  + GL+  L +I+KVG+VTT+G+ +  ++YVGDPGRRI++RGLRPLF  +CTL+W G+Y  +  S   R  FL +V +  R+F
Sbjct:   13 WDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTS-SFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: UPI00122F4783 (NAD(P)H-dependent oxidoreductase n=1 Tax=Roseibium aestuarii TaxID=2600299 RepID=UPI00122F4783)

HSP 1 Score: 175 bits (444), Expect = 1.230e-50
Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            K LVV  HP   + SF  +L   V ++L   G+ +R+ +LY E FQP MS  E RGY   H +    + VK HVED+LWC  L+  YPTWWY  PA+LKGWLDR +VP V F++P+      P      ++ HI K+G+VTT G  +W  + +G+PGR+ + RG+R L HP C  ++   Y +++ +P++R  +L  VR   + F
Sbjct:    2 KTLVVYCHPC--EESFNASLRDTVLETLRDAGHAIRVRDLYGEAFQPVMSAAERRGY---HDEFDNVQPVKDHVEDILWCESLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFEMPSETRSARP------KMQHIRKLGVVTTCGASWWLSKVIGEPGRKTLLRGMRTLCHPACKTLYMAHYKMDSSTPQSRETYLAKVRQRLKSF 195
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: F2IWC8_POLGS (NAD(P)H dehydrogenase (Quinone) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) TaxID=991905 RepID=F2IWC8_POLGS)

HSP 1 Score: 175 bits (443), Expect = 1.730e-50
Identity = 88/205 (42.93%), Postives = 124/205 (60.49%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            + LVV  HP  +  SF  A+   V  SLEA G+E+RL +LY E FQPAM+  E RGY   H  G   E V+ HVE++LWC  LV  YPTWW+  PA+LKGWLDR +VP V F++P         +G+  R+ HI K+ +VTT G  +W  + +G+PGRR + RG+R L  P C  ++   Y +++ + E+RS +L  V    ++F
Sbjct:    2 RALVVYCHPCAE--SFNAAVLRTVLASLEAAGHEIRLVDLYAEGFQPAMNAEERRGY---HDHGSNVEPVRTHVENILWCEMLVFVYPTWWFGLPAMLKGWLDRVWVPHVTFEMPTEA------SGMRPRMQHIRKIAVVTTCGASWWVSKLIGEPGRRTLLRGMRALCAPRCRTLYLAHYKMDSSTSESRSCYLAMVTRRLKRF 195
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: A0A6N6VDW8_9HYPH (Flavodoxin family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VDW8_9HYPH)

HSP 1 Score: 169 bits (428), Expect = 3.060e-48
Identity = 85/199 (42.71%), Postives = 123/199 (61.81%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVR 730
            KVLVV  HP  +  SF  AL   V D+L+A+G++VRLT+LY ENF P +   E R Y   H +GK    V  H+ ++ W   L+  +PTWWY  PA+LKGWLDR FVPGV+F +P G         ++  LT+++ VG +TT G+ +W ++ VG+P RR + RG+R   HP C  +W   Y +++ +PE+R ++L  VR
Sbjct:    2 KVLVVYSHPVPE--SFCAALRDTVVDALKAKGHDVRLTDLYAENFDPRLGCQERRDY---HTEGKNLTYVPEHIANIQWAEALIFVFPTWWYGLPAMLKGWLDRVFVPGVSFTMPKG------QMPIMPALTNVKLVGGITTCGSPWWWMKIVGEPHRRTLLRGIRGSCHPRCKTLWMAHYRMDSSTPESRKSYLALVR 189
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: UPI001A8F307D (NAD(P)H-dependent oxidoreductase n=1 Tax=Roseibium limicola TaxID=2816037 RepID=UPI001A8F307D)

HSP 1 Score: 167 bits (423), Expect = 1.720e-47
Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            + LVV  HP   + SF  AL   V  +L++ G+EVRL +LY E FQP MS  E RGY   H +G     VK HV+D+LWC  L+  YPTWWY  PA+LKGWLDR +VP V F +P          G+   + HI ++G+VTT G  +W  + VG+PGR+ + RG+R L HP    ++   Y +++ + E+R  +L  V    + F
Sbjct:    2 RALVVYCHPC--EESFNAALRDKVVATLKSAGHEVRLRDLYKEGFQPVMSAEERRGY---HDEGDNVVPVKAHVDDILWCEMLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFQMPTAD------RGMRPNMQHIVRLGVVTTCGASWWLSKLVGEPGRKTLMRGMRALCHPRGKTLYMAHYKMDSSTVESRETYLAKVERRLKSF 195
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: A0A7X5JAQ4_9HYPH (Flavodoxin family protein n=2 Tax=Pannonibacter TaxID=227873 RepID=A0A7X5JAQ4_9HYPH)

HSP 1 Score: 166 bits (419), Expect = 6.820e-47
Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            +VLVV  HP  +  SF  A+   V  +L + G+E+R+ +LY ENFQPAM   E RGY   H  G     V+ HVE +LWC  +   YPTWW+  PA+LKGWLDR +VP V F++P         TG+  ++ HI K+ ++TT G  +W  + +G+PGR+ + RG+R L  P C  ++   Y +++ +P++R  +L+ VR    +F
Sbjct:    2 RVLVVYCHPCPE--SFNAAVKETVLSTLVSAGHELRVIDLYGENFQPAMGADERRGY---HAQGSNVRPVERHVEAILWCEMITFIYPTWWFGLPAMLKGWLDRVWVPHVTFEVPTET------TGMRPKMQHIRKIAVITTCGATWWVSKLMGEPGRKTLLRGMRVLCAPRCKTLYLAHYKMDSSTPDSRRQYLDKVRRKLARF 195
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BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: A0A2H0ETD4_9RHOB (NAD(P)H dehydrogenase n=2 Tax=unclassified Rhodobacterales TaxID=285892 RepID=A0A2H0ETD4_9RHOB)

HSP 1 Score: 165 bits (418), Expect = 9.340e-47
Identity = 88/205 (42.93%), Postives = 119/205 (58.05%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            +VL+V  HP+    S+  +L   V ++L   G+E+R+ +LY E FQP +SR  +R Y  A R+    ED   HV  L W  GL+  YPTWWY  PA+LKGWLDR + PGVAF LP   D P     +   LTHI K+G+VTT G  +W  Q VG PGR +M RG R L  P C  ++   Y ++A +P++R  F   VR +  +F
Sbjct:    2 RVLIVHSHPD--PDSYNASLCRTVAETLTRGGHELRVIDLYAEGFQPVLSREGWRAYEDAARNADGIED---HVAALRWAEGLIFVYPTWWYGLPAMLKGWLDRVWTPGVAFTLPK--DGP-----IAPSLTHIRKLGVVTTCGASWWLTQVVGAPGRNLMLRGCRFLMAPRCKRLYLAHYRMDASTPQSREKFRARVRRAMARF 194
[Close]
BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Match: A0A651EEL6_9RHOB (Flavodoxin family protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A651EEL6_9RHOB)

HSP 1 Score: 164 bits (415), Expect = 2.630e-46
Identity = 88/205 (42.93%), Postives = 116/205 (56.59%), Query Frame = 2 
Query:  134 KVLVVSVHPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGYMTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFVPGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPGRRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF 748
            +VLVV  HP+ +  SF  AL  A   +LE  G+EVRL +LY E F P +SR ++RGY     +G    D   HVE L W   LV  YPTWWY  PA+LKGWLDR ++PGV F LP   D    +TG       + K+G+VTT G  +W  Q VG PGR ++ RG R L    C  ++   Y ++A +P  R+AFL  V  +  +F
Sbjct:    2 RVLVVHSHPDPE--SFNAALCAATVAALEKAGHEVRLIDLYAEGFDPVLSREDWRGYENPETNGAAVAD---HVERLRWAEALVFVYPTWWYGLPAMLKGWLDRVWLPGVTFSLPRDGDIRPLLTG-------VRKLGVVTTCGASWWLTQIVGAPGRNLLLRGCRFLMARRCRTVFLAHYSMDASTPGTRAAFLAKVERAMARF 194
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXF8_ECTSI7.550e-11969.87NAD(P)H dehydrogenase (Quinone) n=1 Tax=Ectocarpus... [more]
A0A835ZJZ3_9STRA5.380e-7248.89NAD(P)H dehydrogenase n=1 Tax=Tribonema minus TaxI... [more]
W7TIP7_9STRA8.800e-5741.49Nad h dehydrogenase n=1 Tax=Nannochloropsis gadita... [more]
UPI00122F47831.230e-5040.98NAD(P)H-dependent oxidoreductase n=1 Tax=Roseibium... [more]
F2IWC8_POLGS1.730e-5042.93NAD(P)H dehydrogenase (Quinone) n=1 Tax=Polymorphu... [more]
A0A6N6VDW8_9HYPH3.060e-4842.71Flavodoxin family protein n=1 Tax=Parvibaculum sed... [more]
UPI001A8F307D1.720e-4741.46NAD(P)H-dependent oxidoreductase n=1 Tax=Roseibium... [more]
A0A7X5JAQ4_9HYPH6.820e-4739.51Flavodoxin family protein n=2 Tax=Pannonibacter Ta... [more]
A0A2H0ETD4_9RHOB9.340e-4742.93NAD(P)H dehydrogenase n=2 Tax=unclassified Rhodoba... [more]
A0A651EEL6_9RHOB2.630e-4642.93Flavodoxin family protein n=1 Tax=Rhodobacteraceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig641contigF-serratus_M_contig641:186541..195069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2.2e-94
Seed eggNOG ortholog2880.D7FXF8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Flavodoxin-like fold
EggNOG OGs2S51M@2759,COG2249@1
Ec32 ortholog descriptionFlavodoxin-like fold
Ec32 orthologEc-07_003040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size957
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig641.17330.1prot_F-serratus_M_contig641.17330.1Fucus serratus malepolypeptideF-serratus_M_contig641 186747..195065 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931982.0783985-UTR-F-serratus_M_contig641:186540..1867461622931982.0783985-UTR-F-serratus_M_contig641:186540..186746Fucus serratus maleUTRF-serratus_M_contig641 186541..186746 -
1690964088.0000415-UTR-F-serratus_M_contig641:186540..1867461690964088.0000415-UTR-F-serratus_M_contig641:186540..186746Fucus serratus maleUTRF-serratus_M_contig641 186541..186746 -
1622931982.2591493-UTR-F-serratus_M_contig641:195065..1950691622931982.2591493-UTR-F-serratus_M_contig641:195065..195069Fucus serratus maleUTRF-serratus_M_contig641 195066..195069 -
1690964088.0668032-UTR-F-serratus_M_contig641:195065..1950691690964088.0668032-UTR-F-serratus_M_contig641:195065..195069Fucus serratus maleUTRF-serratus_M_contig641 195066..195069 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931982.140623-CDS-F-serratus_M_contig641:186746..1869561622931982.140623-CDS-F-serratus_M_contig641:186746..186956Fucus serratus maleCDSF-serratus_M_contig641 186747..186956 -
1690964088.0152311-CDS-F-serratus_M_contig641:186746..1869561690964088.0152311-CDS-F-serratus_M_contig641:186746..186956Fucus serratus maleCDSF-serratus_M_contig641 186747..186956 -
1622931982.2056308-CDS-F-serratus_M_contig641:187251..1873621622931982.2056308-CDS-F-serratus_M_contig641:187251..187362Fucus serratus maleCDSF-serratus_M_contig641 187252..187362 -
1690964088.026584-CDS-F-serratus_M_contig641:187251..1873621690964088.026584-CDS-F-serratus_M_contig641:187251..187362Fucus serratus maleCDSF-serratus_M_contig641 187252..187362 -
1622931982.222441-CDS-F-serratus_M_contig641:187673..1878761622931982.222441-CDS-F-serratus_M_contig641:187673..187876Fucus serratus maleCDSF-serratus_M_contig641 187674..187876 -
1690964088.0446832-CDS-F-serratus_M_contig641:187673..1878761690964088.0446832-CDS-F-serratus_M_contig641:187673..187876Fucus serratus maleCDSF-serratus_M_contig641 187674..187876 -
1622931982.2404647-CDS-F-serratus_M_contig641:194842..1950651622931982.2404647-CDS-F-serratus_M_contig641:194842..195065Fucus serratus maleCDSF-serratus_M_contig641 194843..195065 -
1690964088.0578818-CDS-F-serratus_M_contig641:194842..1950651690964088.0578818-CDS-F-serratus_M_contig641:194842..195065Fucus serratus maleCDSF-serratus_M_contig641 194843..195065 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig641.17330.1

>prot_F-serratus_M_contig641.17330.1 ID=prot_F-serratus_M_contig641.17330.1|Name=mRNA_F-serratus_M_contig641.17330.1|organism=Fucus serratus male|type=polypeptide|length=249bp
MIDHVYRTLGRRAWPPIVASAVRALNRITTFVPPPPSAAGGGGKVLVVSV
HPNGKQPSFTLALTTAVCDSLEAEGNEVRLTNLYDENFQPAMSRVEYRGY
MTAHRDGKLTEDVKGHVEDLLWCSGLVLCYPTWWYSFPAILKGWLDRAFV
PGVAFDLPNGVDEPDPMTGLISRLTHIEKVGMVTTFGNGFWNVQYVGDPG
RRIMSRGLRPLFHPECTLMWKGLYDVEARSPEARSAFLEDVRASFRKF*
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mRNA from alignment at F-serratus_M_contig641:186541..195069-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig641.17330.1 ID=mRNA_F-serratus_M_contig641.17330.1|Name=mRNA_F-serratus_M_contig641.17330.1|organism=Fucus serratus male|type=mRNA|length=8529bp|location=Sequence derived from alignment at F-serratus_M_contig641:186541..195069- (Fucus serratus male)
GGGCATGATTGATCACGTCTATAGAACACTAGGTCGAAGAGCTTGGCCTC
CAATTGTCGCGAGTGCTGTGCGAGCGTTGAATCGAATTACAACTTTCGTG
CCTCCTCCTCCCTCTGCCGCGGGTGGTGGAGGCAAGGTGCTTGTCGTCTC
AGTACACCCTAATGGGAAACAGCCGTCCTTCACCTTAGCCTTGACGACGG
CTGTGTGTGACTCGCTAGAGGCTGAAGGTGAGCTGGTAATCGGGGCACTT
TGACAGCGTGGTAAAGGGTTGAGTGGTTCTAGCTATTAATAGTAGATGGC
TCTTGACTGAGATGGATAGAAAAAGTCGATGCCATTCAGCGTTTTGGTTG
CCAACCCGAAATATGATAAGTTGATTGACTGCTCAGTTTTAGCGTTCCGT
CCTATTAATAGCAGAGAAACTACGGTGGATTAATGTAAGTGCACAGTATA
ACGATGGGCTTCGCCCCGACATATTGCTGTTGACACAATGTTACTATTAA
TACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATCTGCAG
CTTATGATCCCGCCTAAACGTCTTAGACTACTCTGTCACTTGACTCAGTA
CAGTAGCCCAATGGCTTAGCCGTACAACTGACACAGGATTCATTGTGATC
GTCAACTATTAATAGTGTAATTGGCGTCGCTTGGCAGATTCTACCCTTCC
GCGTACGATAGCAATTTTCCTAGTCTCGTTCGCCTCTGTGTTCTCCTGGC
GATGTCTAGCCGTGTGTTCCTCTTCTTTCCTCCACGCGGCCATCAACCTC
CGCCCCACCTCCGTGGCCGTCTCAACCCACACCCCTGCCTCCAACGACGT
CGCTTTCCAGTCCACCGCTATGCCAAACGCCCGGACTTCGCTCTGCACGC
AATCGGTCCACTCTTTCTCCTTCCCACCCCGTCCTCTCTGCGCTGCACCC
TCGAGGTTTACGAACTCGATTAGTCGCTTCGGCAACCGCCCGCCACTCAT
TCGGAGGAGCGTTCCCGCCTACAAGAGTCTTCTCGTAAACAAGGCTGTCG
CAATGCTCTCACATCCAGTTATCTCGAGGGCGTGGTTGTAGGAAATCATC
CGATAGTCTGGTTCTCTTGTGCTGTGCCCCGACGACGCGAAGCAAGATCC
GGTGGTGTACGGTGCGGAGTTTGAAGTAATGTTCCTGGCGAAGGGTCTAC
GTACTGCATTCGTACAGTAGAGCCTCGGTTGCCTCGACCTTTACCATTCG
GATCTAGAGGGCGCGTGCCCCTTTTGGCTGGTCGTAGACCTCACGTAAGT
ACCGCCTGATTCTCATCCAGCATGCGCGGTCAGGAAGGTGAATGCTTGCA
CCTGTTTGTATATTTTCCTGGCCGCTTCGACTTGCGTCGTCGTCCGCGCG
GTGGAGGTATGCACGCGGTTTGTGTCTTCTTCTCAGACACGGTTAGGATG
AAGGCTGGGTAAACCTCCACGATGACCTTCATTTTTTTTAGCAAGCTCCC
CGCAGGGATCGTGAAACTATGTAGATGTCATCCGCGTACAACATACCCCA
CACGGTGCGACGAACGTAGTCTATGGTGGGGTCCGGTCCCATCGACGTCG
GCGGTTCCTTCGAGTGCACCAGGTCGGCGAGGATGGCCGTATCCTCGCTG
AATCTTTGGAGGACGACGGTCAGCTCGACTGCGAAGAAGATGGTAAGCAA
CAGCGGGGATAGTACGCATCCTTGCCGTAGTCCTTGCTTTTACCTCAAAC
CATTCCGAGCAGACGCCGTCATCAGGTCGCACACAAGCTTTCATCCCATC
GTGGAATTGTAATTGTCGGTTGACGGCTTTCGTCTGCGGTGACACTCCAA
TGCGAGTGAGTACCTGCCACAGAAAGGGTGCGTTGAAATGTGATCCGTTA
TCACGCAGATCCTGTCGACCGTGTTGCAGCACGATATATAGTCGAGGCCC
GACCAATCAATGTGCAGGACACACACGCTCACACACACACGCACACTCAC
ACCCACACCCACACCCACACCCACACCCCCCCTTGGGAGGACCAATGCGA
GCAGCCCATAATGACTAGGACGACAGGACCGGATTGCGCGGTTATGAATA
ATTCAATAAACACCCACTCACACACACACACACACACACACACACGGCGA
GCGAACGACCACAAGATGGAAACGGGAGCGGGGACGCGGGGACGGGGCGG
GGACGGGAACGGGGGTAGAGACCCGAGGACAAGCACAAGATGGGAACGGG
GACGGGAACTAAAACAGAAGCGGAGACGGAAAAGGGAATGGGGACGGGAT
TGGAGACGGGAAAAGGAACGAGAATGAAGAGGGACGCGGGGGACGACGAG
AGCTCTGGTATCCTCCACATCAGGAACGAATAGTATAACACCAGGCACTG
CTATTCCGCACGCGGCACTATCTCTGTAGACAGCAAGTGGTACCCACAGG
TAGCTAGCAGCTTCGTGCGCAAGACCCGGCGCCGGCCCGTCGATGTGGTA
CCGAGAGGAGAACAGGGCACCAGGGACGGAAGGGAGGAAGCGGGGACAGG
GACGGGGGCGGGGACGGGGACGGGAAGGATTACGATTACGGGGATTTGTA
CAAGGGTAGAGATGGGAGCGGCAACACGAGCGGGAAAGGGAGAGAGGACG
GGGATGAGAATAGAGATGAGGGTGGAGGGAAGAGATAGCCTAGGAACTTA
CGAAGTGGCATTAGAGGTGTTATAGGTCGGAAGATGCGAGGAGGCGAGCT
ACGCGAACGAGTAACCGGCAAGCGTAGCCGCAAGACCCGACGCCTCAGCG
AGACCGTCGCATCATGCTGAGATCCAGAGCCCAGGCACAGAAGGCGAGGG
AATGGATCGGGGAGGGCGGAGGAGAGGCGAAGGAACGCAAGAAACCCCAA
AGGAGTTGTAGACGCGATGTGGGAAACGGGGTGGACTTGGGCGGAAAGAG
AAAAAAGCGTAGACAAGAAAGGTTCGGTTCAGCAGCTGTCGACCCAGTTA
ATCTAGAGAATAGCAAGGAAGCAGCGAGGGAAGCGCAAGGCATTCAGGGG
TAAGTAAGAACTGTACAGAGAGTGTGTCCACTTTGTCGCGTCTGATACAG
AACCCAGGGATGGGATGCGAGGGACAGGATCGGGGAGGGCGGAGGAGAGG
CGAAGAAGCGCAAGAAACCCCATGTGGGAAACGGGGGAGACTTAGGCGAA
TAATAAATAAGAATTGGGAGGACAACTGCGAATGGCATAGAATGACAAGA
AAGACAGGGCCGGATCGCGCGGTTTCACACAAGTATCATTGATCCCCCCT
CGGGAGGATCAATGCGAGTTGCATAGAATGACTAGGATGACAGGGCCGGA
TTGCGCGGTTATGTGCAATTTAATAAATACACACACACACACACACACAC
ACACACACACACACACACCCCCCTTTGTCGCGTCTGATCACACACACACA
CACACACACACCCTTTGTCGCATCTGATCAGAGGTTTTCGTAATAAGTAT
CATTAATCCCCCCTTGGGAGGATCAGTACGAGTGGCGTAAAGTGACTAGG
ATGACAGGGCCGGATTGCGCGGTTATGTGCAACCTCATAAACACATAAAA
ACACTTAATAAATACTCACAATGCTATATACACTATATACATTAGCATAT
GAGCAAAAAAAGGCAAGCCTTTTTTTTTGGACTGAAATTGAAACGTAGAC
GATGGGTGCTTCACTAAAAGGGGCGGTGAAAAAATTACGCGACAACATCT
GGAGGTCACCCGCAGTACAAGGTTCCAGTCGGCGCAGGCTTTTTAGATTA
TTTGGGCCCACGACGGGCTGTGGCTGGCGTTCCAAAATTCGAGTCAAAGT
AACTTATACAGGGTAGTAACCACATGACCCAAGCCAAAAAAAAAAAAAGT
TGATGCAGTTCAATTCCAACAAACAACGTTTTGGGCTCGCATTTTCTTCC
GCCTTCTACTTGACATGTACAATCTATGTCGTTCTTCTGCTGTAGGAGGG
CCGAGCGAGTTGTTGCTATTATTCAGATGAAGGAGTCGAGCGCAGGCGAC
ACCCATCCGCTTAGCGTATGACGCTGACTGCAAGGAACTTGCAACGGACG
AAGCTCGCTTTACCGCTGGCTTGAGAAGGTTGGTGTTATTAATGGAGTAG
CGTGAAAACCTCTTTTTGGCCATCCATCTTTTACGAACTCCATCTTTTAC
CAACACCTTACACGCGCTCGCGGTATCTCGGTCGTAGAGACAGGCAGACA
GCTTTCGCTCTTTTGCTTACGACCCAGCTACAGCCTCCGCCGCCGCCGCA
GCAGCAGCAGCAGCAGCAGATGACGTCCTGGAGCTGCCTCACTCACACTT
TCACGACATTGAATCAAGACTTTAGTTTTCGAACGCCTGGTCTCGTGCCC
AAAGAAATTGCCCGTCCCAACGGTTTCGTCTCATCAAGATGTCTCAAGAT
GCAGCGCACGTCAACCCAAACCGTGCTTGGACATCCCTGGGAGCTGGATC
GAGAGTGAAAACCTATTGTACAGCACTATCACTGCCATACAGTTATTACC
CACTCGGCGTTGTCCTCTGAGCTATGAAAGCTACTAAAACCGATCTGGGG
ATCGCCGAGAGAGTAGCATGGAATAATGCACGGGAAATGAGAACAGCACA
TAGTTATGTGTCGGTTGTTTGGTGGGAGAACGAGCACATATACTATACTC
TCGGTCGCAAATTGTATCAGAAAATCCAGGTTCCGCCGTTCCATTTCCCA
GGGTGCTGTAGCAATACTTGGCTACAGCTACAGTACCCTAACGAGAAGAG
GTGACCCCAAAATGCCTCAAATACATTACAAACTCCAGATACAGGGCCAT
CTGTTGACGCAAGTTACGGCTCGCAGGGCTGAGATCGGCACTGTGACGGC
GAGCGCGGCTTTAGGTACGAGCCGATGTGCTCCCCTCTCGCGCGGCACCC
TTACATTCCCGACGCGTTTTGTCGCCGATCAACGTGCTGAGGCCAACCTG
AGTCATGTAGATGAGTCCGCGGTGCGAGTGTCCGGTGCAAGGTCCCAGCG
TGGAGGGCGTAGGCCTGTGCGGCTGAAGAGGACCCTGGCTTGATGGGTTA
TGTGTATCCACTGATCCCAAAACAAACTAAAGCCTCCCAACGTTTTGACT
GAAAAACATTTTTGTTGCTTGTTCTATTCATATATATATTGCAGCACCAC
GATTTGAAGATGACTTACTGTTCTGCAGCTCGTCGCCCCGAGTGGTCTAG
TAGGTAACCTGCACACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTCTG
CTTAAGCAGAATTTGTGTTCTTTCTTTCGTAACGGAAAGCGTGGGAACGG
GAGTAAGTAGAAATTAACCTTTGGTTGACGAGCTGTAAGATTGCTGAACT
TGTGTCGCGATAAAAATCGTAAGGCGTGAACCGGGCAGAGATGGGAAAAT
CCTTTGTGACTACAGGCAATATGTTAATGATAGGTCCATCGGCTGCAAGT
GTGATATTAAAAATATAAAATAAAAAGTGGAAACAAATGGCATCAAAAGG
TGACGAGGCACAAAATTGCTGAACAGCACCTCTGGCAAATGTGTCTAATA
AGGTTTGCACGCTCGTGCCCCGAACACTTCCAGGCACAAACTACAGAACC
TTGACGAGCAGTACCTCGTGCGCGGTGTCAGGAAGCATGGCCAAGCACTT
AGCGGTGGGGATGCACGTCGAGCGCCCTTAAGTGCTGCAAGTCTCCCTCC
GCCTATTCTGAGTTATTTCTAAAGTTAAGTAACCATTTCAGTCAACTGAT
GATTCCATTCAAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTAT
TAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTAT
GCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATACTTATTACGAA
AACCTCGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCGC
GCAATCCGGCCTTGTCATCCTAGTCATTCTATGCCACTCGCATTGATCCT
CCCGCGCGGGGATCAATGATACTTATTACGAAAAAACCTTGTTTGTGTGT
GTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTAT
TTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATT
CTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATACTTATTA
CGAAAACCTCTGATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTT
GCACATAACCGCGCAATCCGGCCCTGTCATCCTAGTTAATTTCATACCAC
TCGCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATTTA
TTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTA
TGCCACTCGCATTGATCCTCCCGAGGGGGATCAATGATGTGTGTGTGTGT
GTGTGTGTGTGTCGTGGGTTCTCTTCCCATTTATTCTGGACATCAAGTTC
GTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGTTCTCATAGGATTTA
TCATCTACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTCTCACGAGAAGG
ATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACT
AACGATTCAATCGTTCTCCACTTAATGGATATATTTTTTATTTTTTTATT
TTTTTATTTTTTTATTTTTTTATTTTTTTATTTTTTAGTAAAAAAAAATC
CCGTTTACCGGAATCGAACTCACGCCCCAACGTGTCAGAAGGTTACGAAG
ATACCTCTGAGCTACAGGGGCCACCGGCTTTGCAAAGCGAGATTCCCCGC
TTCAAAATATGAAATAAGGTTGCGGTCCGGTTAGTATTCGCCGATAAAAT
CTATCAAAATAAAAAACGTGATGAGAGAAAAAAAAAGGGGCATTTTCTGA
TACCACCCGCAGCTATGGTACATTTTTTGCCGTAGACGTTGATTATTATT
TTTTGTCTCCTTCCCACAACTCCGAAAACTGCCCAGCTGCCGCCAGCCTC
TCAGAAACAATAACCGAGCGTCGGTGTTCTGTCTCGTCATGCAAATCTTG
GAATCGCGAATGCGCCTTCCTTCCCACGGTGGCTCTTCTCCAGGGAACGA
GGTCCGATTGACAAACTTGTACGACGAAAACTTTCAGCCAGCCATGAGCA
GAGTGGAGTACCGAGGGTACATGACCGCGCACCGGGACGGGAAGTTGACG
GAGGACGTCAAGGGGCACGTGGAGGACCTGCTGTGGTGTTCCGGGTTGGT
GCTGTGCTACCCTACCTGGTGGTACTCTTTTCCAGCCATTCTAAAGGTGA
GGTTTTAAGTCGTGGAGCTGCTGTCACTGGGTACTAGACTATGATACACT
TGTAATTATTCTGAGAGATGGCGAGCCTGGGAATGGTGTGAAGGTTAAGT
CATGTTCCTTCGACATTTTTACATGTGCGGTTATATAATGTCTTTTTTCC
AACTTCGATTTGACAGATATTGTTTGGCGAGCTCGAACCGTAACTTATTT
TTTGTAACGGTCGCGTCGACAACCCTCGGCCGAATCGGGAAAAAGGTCAT
GTATAGGTGATGATCTCCTTGATCCTTCTCCATTCCCCCTGCCCACCCCC
CATCTAGGGCTGGCTCGACAGGGCATTCGTGCCAGGTGTCGCGTTCGACC
TCCCGAACGGTGTGGACGAGCCGGATCCCATGACTGGTCTGATAAGTCGT
CTGACTCACATCGAGAAGGTGTGTTCCTCTTAATAGACAATAAGTATCAC
TTTATCGCACAATACAAGTATTAGGGGAAGCTTAAACGGATTAGTCTATA
TACCACACTGTAAGAGACGTTTCTAGCGACATCAAAATCAGCAAAGTCGG
AGCTCGATGTGCAGCAGACTAACGATCTCTTCGCGGCAATTCGTCCCACA
AAATCATAACCAAATCGGCCTCTTTGGGAAGCAGGAAGTCGATTCGGAAA
CCAGCTCTTTATTTGCTTTAATATTATTTTTTGTAATTTTCTTTTTTTCT
TTTTTTCCCCCAGGTGGGAATGGTGACGACCTTCGGGAATGGGTTCTGGA
ACGTCCAATACGTTGGCGACCCCGGGAGAAGGATTATGTCGCGTGGCTTG
CGTCCACTCTTCCATCCCGAATGCACCCTGATGTGGAAGGGGTTGTATGA
CGTGGAAGCGCGGTCGCCCGAAGCTAGGTCGGCGTTTTTGGAAGACGTCC
GAGCCTCGTTTCGAAAATTTTAGTCTTACAAAAATTCAAGCATTTTATAA
ATATATGTGATGAAGAGCCAGTTCTATTCGCCTCCGTTTCTATACTTTTT
TGCCAAACTAGCTCGCTGCCTGTTTGCTCCAAAAGAGATAGAGTTTGAAG
CACGCTCGAACCTACCAGACTTCGCTGAGAACTTGTCTTTCTCTGACATT
CCTACAGTAGTACCAATAAGTTCGTTTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig641:186541..195069-

>mRNA_F-serratus_M_contig641.17330.1 ID=mRNA_F-serratus_M_contig641.17330.1|Name=mRNA_F-serratus_M_contig641.17330.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig641:186541..195069- (Fucus serratus male)
ATGATTGATCACGTCTATAGAACACTAGGTCGAAGAGCTTGGCCTCCAAT
TGTCGCGAGTGCTGTGCGAGCGTTGAATCGAATTACAACTTTCGTGCCTC
CTCCTCCCTCTGCCGCGGGTGGTGGAGGCAAGGTGCTTGTCGTCTCAGTA
CACCCTAATGGGAAACAGCCGTCCTTCACCTTAGCCTTGACGACGGCTGT
GTGTGACTCGCTAGAGGCTGAAGATGATTGATCACGTCTATAGAACACTA
GGTCGAAGAGCTTGGCCTCCAATTGTCGCGAGTGCTGTGCGAGCGTTGAA
TCGAATTACAACTTTCGTGCCTCCTCCTCCCTCTGCCGCGGGTGGTGGAG
GCAAGGTGCTTGTCGTCTCAGTACACCCTAATGGGAAACAGCCGTCCTTC
ACCTTAGCCTTGACGACGGCTGTGTGTGACTCGCTAGAGGCTGAAGGGAA
CGAGGTCCGATTGACAAACTTGTACGACGAAAACTTTCAGCCAGCCATGA
GCAGAGTGGAGTACCGAGGGTACATGACCGCGCACCGGGACGGGAAGTTG
ACGGAGGACGTCAAGGGGCACGTGGAGGACCTGCTGTGGTGTTCCGGGTT
GGTGCTGTGCTACCCTACCTGGTGGTACTCTTTTCCAGCCATTCTAAAGG
GAACGAGGTCCGATTGACAAACTTGTACGACGAAAACTTTCAGCCAGCCA
TGAGCAGAGTGGAGTACCGAGGGTACATGACCGCGCACCGGGACGGGAAG
TTGACGGAGGACGTCAAGGGGCACGTGGAGGACCTGCTGTGGTGTTCCGG
GTTGGTGCTGTGCTACCCTACCTGGTGGTACTCTTTTCCAGCCATTCTAA
AGGGCTGGCTCGACAGGGCATTCGTGCCAGGTGTCGCGTTCGACCTCCCG
AACGGTGTGGACGAGCCGGATCCCATGACTGGTCTGATAAGTCGTCTGAC
TCACATCGAGAAGGGCTGGCTCGACAGGGCATTCGTGCCAGGTGTCGCGT
TCGACCTCCCGAACGGTGTGGACGAGCCGGATCCCATGACTGGTCTGATA
AGTCGTCTGACTCACATCGAGAAGGTGGGAATGGTGACGACCTTCGGGAA
TGGGTTCTGGAACGTCCAATACGTTGGCGACCCCGGGAGAAGGATTATGT
CGCGTGGCTTGCGTCCACTCTTCCATCCCGAATGCACCCTGATGTGGAAG
GGGTTGTATGACGTGGAAGCGCGGTCGCCCGAAGCTAGGTCGGCGTTTTT
GGAAGACGTCCGAGCCTCGTTTCGAAAATTTTAGGTGGGAATGGTGACGA
CCTTCGGGAATGGGTTCTGGAACGTCCAATACGTTGGCGACCCCGGGAGA
AGGATTATGTCGCGTGGCTTGCGTCCACTCTTCCATCCCGAATGCACCCT
GATGTGGAAGGGGTTGTATGACGTGGAAGCGCGGTCGCCCGAAGCTAGGT
CGGCGTTTTTGGAAGACGTCCGAGCCTCGTTTCGAAAATTTTAG
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