mRNA_F-serratus_M_contig641.17329.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig641.17329.1
Unique NamemRNA_F-serratus_M_contig641.17329.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: D7G8W6_ECTSI (N-alpha-acetyltransferase 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W6_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 3.170e-101
Identity = 181/343 (52.77%), Postives = 221/343 (64.43%), Query Frame = 2 
Query:   92 MPSAKKERSRRKKRAAAPGRSLPPALRAAAARLEAANAVSDLSTGMEAFLSIDLPAVQVATESEGPTKRPGHHPLSDTAVEPLHMEIRAPTNLSKVDARRIYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQ-LAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSKPTRHWAARGRKATMM 1117
            MPSAKK+RS              PA+ AAA+R+EAANA  DLS G+EAFLSIDLPA    + +  PT  P          EP+ +EIR+P  L   D + +YDLL +NM D+Y+ AGWGW++  K REMEH  +RFLIAR G TE   G  AA    A L                ++    +S   G G   D+     AA A +        GG G+ +AG+C FRF+WDQD+ E+GEGVG   DVLYVYE+QVAPWA RRGLGRRMMQA+ELLANRHGM+K+MLTVFK N+QAMSFYTK+MKY +D+DSPSNWD+PDEVYEILSKPTR  AAR ++A  M
Sbjct:    1 MPSAKKQRSXXXXXXXXXXXXRSPAVAAAASRIEAANATLDLSAGLEAFLSIDLPAAAAVSGAAAPTPVP---------AEPVRLEIRSPKTLLDGDTQVMYDLLKSNMHDMYMAAGWGWNKAEKWREMEHRDSRFLIARCG-TEDDSGPEAAAVGVARLRVA-------------EEGVSESSAVNGAGGATDSEE---AARARSRGGEERKPGGAGERIAGYCDFRFAWDQDENEDGEGVGGMEDVLYVYELQVAPWATRRGLGRRMMQAIELLANRHGMTKVMLTVFKENRQAMSFYTKKMKYGVDKDSPSNWDQPDEVYEILSKPTRQGAARTKEALRM 317
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A7S1FZT1_9STRA (N-alpha-acetyltransferase 40 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZT1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.120e-25
Identity = 87/309 (28.16%), Postives = 132/309 (42.72%), Query Frame = 2 
Query:  149 RSLPPAL-RAAAARLEAANAVSDLSTGMEAFLSIDLPAVQVATESEGPTKRPGHHPLSDTAVEPLHMEIRAPTNLSKVDARRIYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSK 1072
            R+LPPA+      RL+AA+A      G+++  ++           +G  +   +    +  ++ L +      N+++      Y + T NMR +Y ++ WG+DE  K +E+ H+ ARFL                                                                       E  I+E    ++  F H+RF WD D+E        S  VLYVYEI V+  A+R G+GRR+M  +E+ A +  M K++LTVFK N  AM FY +RMKY +DE SPS +    + YEILSK
Sbjct:    2 RTLPPAVYNEFKERLDAASAFDPTRDGLQSLCTMK-------NIIQGSHRDKNNETDGNDQLQRLQINFHRSNNMTEYFRASCYTIFTTNMRGMYEDSSWGFDEEKKMQELRHNGARFL-------------------------------------------------------------------TVVNEGDINE----KVLAFSHYRFEWDNDEEP-------SCPVLYVYEIHVSSEAQRYGIGRRLMTIMEMTALQCKMKKVILTVFKKNLSAMRFYRERMKYGVDESSPSCYGEEAD-YEILSK 224
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: B7FVF1_PHATC (N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVF1_PHATC)

HSP 1 Score: 107 bits (268), Expect = 4.400e-24
Identity = 75/237 (31.65%), Postives = 111/237 (46.84%), Query Frame = 2 
Query:  365 NLSKVDARRIYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSKP 1075
            +LS+ D     +L  ANM  +Y+++ WG D   K  E +H +ARF++     +   +               G S+R +T ++                                             LA F HFRF +D +D+        S  VLY+YEIQVA   +R+GLG+++M  +E +     MSKI+LTVFK N QAM FYT+++ Y +DE SPS + +  + YEILSKP
Sbjct:   11 DLSEEDLDSCLNLFRANMGQMYLDSSWGLDMTKKAAEFQHRKARFVLIHQINSNAEDNHDI-----------GISDRPVTAST---------------------------------------------LAAFVHFRFEYDDNDDP-------STIVLYIYEIQVAEAYRRKGLGQKLMALMEQIGCAVQMSKILLTVFKKNTQAMQFYTEKLCYGVDESSPSKFGKFAD-YEILSKP 183
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A1V9YDV1_9STRA (N-alpha-acetyltransferase 40 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDV1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 6.970e-24
Identity = 73/236 (30.93%), Postives = 101/236 (42.80%), Query Frame = 2 
Query:  368 LSKVDARRIYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSKP 1075
            L+  +  ++  L  ANM+  Y ++ WG+D  +KR E+ H  AR+L+A                                                                              G + GF HFRF  D          GA  +VLYVYE+Q+ P  +R+GLG+R+MQ LEL+  ++ M  I+LTVFK N  A++FYT ++ Y IDE SPS     DE YEILSKP
Sbjct:   54 LTTDEKTKVEALFCANMQTFYEQSSWGFDIESKRAELFHADARYLVA------------------------------------------------------------------------------GDVDGFLHFRFVEDD---------GA--EVLYVYELQIGPSLQRKGLGKRLMQLLELIGRKYKMKWILLTVFKANTSALTFYTHKLGYDIDETSPSQHGNLDESYEILSKP 200
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A7S1ZW93_TRICV (N-alpha-acetyltransferase 40 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZW93_TRICV)

HSP 1 Score: 107 bits (268), Expect = 9.150e-24
Identity = 82/251 (32.67%), Postives = 113/251 (45.02%), Query Frame = 2 
Query:  326 AVEPLHMEIR--APTNLSKVDARRIYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSK 1072
            A E   + IR  A  +L+ V ++   DL   NM ++Y  + WG D   K  E  H +ARFL+      E V+               G+ E+S+    E  +                                     G+ +L  F HFRF  D DD    E       VLY+YE+QV+P   RRGLG+++M  +E +A + GM K++LTVFK N  AM+FY   M Y +DE SPS +   D  YEILSK
Sbjct:   22 AREQFTVRIRCVAGKSLAPVASKSCLDLFETNMAEMYQRSSWGLDLRKKADEFRHERARFLLL-----EKVDA--------------GNMEKSVELMGESSE-------------------------------------GKNELLAFGHFRFEPDDDDHPKLE-------VLYLYELQVSPLYHRRGLGQKLMSIMEDVAKKRGMKKVVLTVFKANVAAMTFYKDGMVYGVDETSPSKFGE-DADYEILSK 208
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: UPI0014257A95 (N-alpha-acetyltransferase 40-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257A95)

HSP 1 Score: 106 bits (265), Expect = 5.700e-23
Identity = 62/117 (52.99%), Postives = 76/117 (64.96%), Query Frame = 2 
Query:  743 GQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWD--RPDEV-YEILSKPTRH 1084
            G   GF HFRF  D D+E           VLY YEIQ+    +R+GLG+ MMQ LEL+AN+  MSK++LTVFK NK A +FY+K +KYSID+ SPS +D   PD   YEILSK T H
Sbjct:  116 GNAVGFSHFRFDMDFDEE-----------VLYCYEIQLESKVQRKGLGKFMMQILELIANKTKMSKVVLTVFKENKVANNFYSKTLKYSIDDTSPSIFDPMNPDLYDYEILSKKTLH 221
[Close]
BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: B8BWT3_THAPS (N-alpha-acetyltransferase 40 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWT3_THAPS)

HSP 1 Score: 106 bits (265), Expect = 9.800e-23
Identity = 77/226 (34.07%), Postives = 115/226 (50.88%), Query Frame = 2 
Query:  398 DLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEV-YEILSK 1072
            +L   NM  +Y  + WG D   KR+E+ H  ARFL+       VVE    +  EK     GG + R          DA+  + +T G                 A   T D+    ++ GF HFR+  + D     E    +  + Y+YE+Q+ P  ++ G+G+R+M  +ELL+ +  M K+MLTVFK+N +AM FY  +MKY +DE SPSN++  ++  YEILSK
Sbjct:   86 ELFEMNMGAMYRRSSWGLDMDEKRKELMHVDARFLV-------VVE---TSNVEKEEDXXGGATTRV---------DAVEVADDTDG---------------ATATLTTADD----KVLGFTHFRYEPNDD-----ESSTPTQPITYLYELQIHPTLQKLGMGKRLMTIVELLSFKCHMEKVMLTVFKMNDRAMGFYLNKMKYGVDECSPSNYEGCEDCDYEILSK 268
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A7S1K199_9ALVE (N-alpha-acetyltransferase 40 n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K199_9ALVE)

HSP 1 Score: 104 bits (259), Expect = 5.990e-22
Identity = 77/251 (30.68%), Postives = 121/251 (48.21%), Query Frame = 2 
Query:  344 MEIRAPTNLSKVDARRIYDLLTANMRDLYVEA---GWGWDEVTKRREMEHHQARFLIARLGGTEVVEGRGAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPGAALAVAAEEATIDEGGRGQ-LAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSID----EDSPSNWDRPDEVYEILSK 1072
            +E R  + +S+ + +R +DL  ANM   Y EA   G GWD+  K +E+    ARF++AR           + PS++AA                          +T  G+D           A  A   T+ + G G  +  F H+RF  + ++E           V Y++E+QV    + +GLGR +MQ LEL++ +  M+K+M T FK N +A+SFY  ++KY +D    E++P  +D  +  YEILSK
Sbjct:   62 IEDRRASVMSRGEIQRCFDLTKANMETFYDEAQPGGKGWDDRAKWKELSEDDARFILAR-----------SVPSQEAAP-------------------------STADGSD-----------AGPATNGTVSKDGDGSDIVAFVHYRFEIELEEE-----------VCYIWELQVDNKTRSKGLGRFLMQLLELVSRKLQMAKMMCTCFKANARALSFYKDKLKYVVDHTSPEENPDEFDEEEMTYEILSK 254
[Close]
BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A7M7HMI9_STRPU (N-alpha-acetyltransferase 40 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HMI9_STRPU)

HSP 1 Score: 102 bits (254), Expect = 1.680e-21
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 2 
Query:  743 GQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDR---PDEVYEILSK 1072
            GQL GFCHFRF  D  D            V+Y YEIQ+ P  +R+GLG+ +MQ LELLA R  M K+M+TVFK N  A +F+TK +KY IDE SPS +D     D  YEI+SK
Sbjct:  116 GQLVGFCHFRFDVDFGDA-----------VIYCYEIQLTPDVRRKGLGKFLMQILELLAFRTEMKKVMVTVFKNNLVATNFFTKVLKYEIDETSPSMYDPMNDEDYCYEIMSK 217
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BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Match: A0A1V9ZWD6_9STRA (N-alpha-acetyltransferase 40 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWD6_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.970e-21
Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = 2 
Query:  743 GQLAGFCHFRFSWDQDDEENGEGVGASGDVLYVYEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYTKRMKYSIDEDSPSNWDRPDEVYEILSK 1072
            G +  F HFRF  D          GA  +V YVYE+QV P  +R+G+G+R+MQ LEL++ ++ +  I+LTVFK N+ AM FYTK+M + ID+ SPS  D  +E YEILSK
Sbjct:  109 GMVDAFMHFRFFEDD---------GA--EVAYVYELQVGPNLQRKGVGKRLMQMLELISTKYKLKWIVLTVFKANESAMQFYTKKMGFEIDDTSPSQHDNTEESYEILSK 207
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig641.17329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W6_ECTSI3.170e-10152.77N-alpha-acetyltransferase 40 n=2 Tax=Ectocarpus Ta... [more]
A0A7S1FZT1_9STRA5.120e-2528.16N-alpha-acetyltransferase 40 n=1 Tax=Corethron hys... [more]
B7FVF1_PHATC4.400e-2431.65N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=Ph... [more]
A0A1V9YDV1_9STRA6.970e-2430.93N-alpha-acetyltransferase 40 n=1 Tax=Achlya hypogy... [more]
A0A7S1ZW93_TRICV9.150e-2432.67N-alpha-acetyltransferase 40 n=1 Tax=Trieres chine... [more]
UPI0014257A955.700e-2352.99N-alpha-acetyltransferase 40-like n=1 Tax=Anneissi... [more]
B8BWT3_THAPS9.800e-2334.07N-alpha-acetyltransferase 40 n=1 Tax=Thalassiosira... [more]
A0A7S1K199_9ALVE5.990e-2230.68N-alpha-acetyltransferase 40 n=1 Tax=Vitrella bras... [more]
A0A7M7HMI9_STRPU1.680e-2151.33N-alpha-acetyltransferase 40 n=1 Tax=Strongylocent... [more]
A0A1V9ZWD6_9STRA2.970e-2148.18N-alpha-acetyltransferase 40 n=1 Tax=Thraustotheca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig641contigF-serratus_M_contig641:176597..182060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.6e-82
Seed eggNOG ortholog2880.D7G8W6
Preferred nameNAT4
KEGG koko:K20405,ko:K20794
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010485,GO:0010556,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0031365,GO:0031935,GO:0033043,GO:0033044,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043967,GO:0043968,GO:0043998,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0051276,GO:0051604,GO:0060255,GO:0060968,GO:0061187,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:1901564,GO:1902275,GO:1903506,GO:1990189,GO:2000112,GO:2001141
EggNOG free text desc.H2A histone acetyltransferase activity
EggNOG OGsKOG2488@1,KOG2488@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-15_004510.1
EC2.3.1.257
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons5
Model size1195
Cds size1035
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931981.8963552-UTR-F-serratus_M_contig641:176596..1766751622931981.8963552-UTR-F-serratus_M_contig641:176596..176675Fucus serratus maleUTRF-serratus_M_contig641 176597..176675 +
1690964087.8828125-UTR-F-serratus_M_contig641:176596..1766751690964087.8828125-UTR-F-serratus_M_contig641:176596..176675Fucus serratus maleUTRF-serratus_M_contig641 176597..176675 +
1622931981.912477-UTR-F-serratus_M_contig641:177236..1772481622931981.912477-UTR-F-serratus_M_contig641:177236..177248Fucus serratus maleUTRF-serratus_M_contig641 177237..177248 +
1690964087.904477-UTR-F-serratus_M_contig641:177236..1772481690964087.904477-UTR-F-serratus_M_contig641:177236..177248Fucus serratus maleUTRF-serratus_M_contig641 177237..177248 +
1622931982.0180056-UTR-F-serratus_M_contig641:181991..1820601622931982.0180056-UTR-F-serratus_M_contig641:181991..182060Fucus serratus maleUTRF-serratus_M_contig641 181992..182060 +
1690964087.9794445-UTR-F-serratus_M_contig641:181991..1820601690964087.9794445-UTR-F-serratus_M_contig641:181991..182060Fucus serratus maleUTRF-serratus_M_contig641 181992..182060 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931981.9264257-CDS-F-serratus_M_contig641:177248..1774411622931981.9264257-CDS-F-serratus_M_contig641:177248..177441Fucus serratus maleCDSF-serratus_M_contig641 177249..177441 +
1690964087.9230556-CDS-F-serratus_M_contig641:177248..1774411690964087.9230556-CDS-F-serratus_M_contig641:177248..177441Fucus serratus maleCDSF-serratus_M_contig641 177249..177441 +
1622931981.9464746-CDS-F-serratus_M_contig641:179106..1797321622931981.9464746-CDS-F-serratus_M_contig641:179106..179732Fucus serratus maleCDSF-serratus_M_contig641 179107..179732 +
1690964087.9370844-CDS-F-serratus_M_contig641:179106..1797321690964087.9370844-CDS-F-serratus_M_contig641:179106..179732Fucus serratus maleCDSF-serratus_M_contig641 179107..179732 +
1622931981.9728994-CDS-F-serratus_M_contig641:181292..1813781622931981.9728994-CDS-F-serratus_M_contig641:181292..181378Fucus serratus maleCDSF-serratus_M_contig641 181293..181378 +
1690964087.9550848-CDS-F-serratus_M_contig641:181292..1813781690964087.9550848-CDS-F-serratus_M_contig641:181292..181378Fucus serratus maleCDSF-serratus_M_contig641 181293..181378 +
1622931981.9988673-CDS-F-serratus_M_contig641:181861..1819911622931981.9988673-CDS-F-serratus_M_contig641:181861..181991Fucus serratus maleCDSF-serratus_M_contig641 181862..181991 +
1690964087.9673345-CDS-F-serratus_M_contig641:181861..1819911690964087.9673345-CDS-F-serratus_M_contig641:181861..181991Fucus serratus maleCDSF-serratus_M_contig641 181862..181991 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig641.17329.1prot_F-serratus_M_contig641.17329.1Fucus serratus malepolypeptideF-serratus_M_contig641 177249..181991 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig641.17329.1

>prot_F-serratus_M_contig641.17329.1 ID=prot_F-serratus_M_contig641.17329.1|Name=mRNA_F-serratus_M_contig641.17329.1|organism=Fucus serratus male|type=polypeptide|length=345bp
MPSAKKERSRRKKRAAAPGRSLPPALRAAAARLEAANAVSDLSTGMEAFL
SIDLPAVQVATESEGPTKRPGHHPLSDTAVEPLHMEIRAPTNLSKVDARR
IYDLLTANMRDLYVEAGWGWDEVTKRREMEHHQARFLIARLGGTEVVEGR
GAAPSEKAALAAGGDSERSLTPTSEPKDDAMRASLNTGGGNDVDARRDPG
AALAVAAEEATIDEGGRGQLAGFCHFRFSWDQDDEENGEGVGASGDVLYV
YEIQVAPWAKRRGLGRRMMQALELLANRHGMSKIMLTVFKINKQAMSFYT
KRMKYSIDEDSPSNWDRPDEVYEILSKPTRHWAARGRKATMMLD*
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mRNA from alignment at F-serratus_M_contig641:176597..182060+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig641.17329.1 ID=mRNA_F-serratus_M_contig641.17329.1|Name=mRNA_F-serratus_M_contig641.17329.1|organism=Fucus serratus male|type=mRNA|length=5464bp|location=Sequence derived from alignment at F-serratus_M_contig641:176597..182060+ (Fucus serratus male)
GGCAGCAAGCCCAAGCGTGTGTGTAAGTGGCTGGAGATAAATCGTACCAC
AATTAACTCCATATCCGTCGCTATTGAAGGTGAGAGACTCTTACAATCGG
TTGCGGGGTGGATGATAACTTTACCACGGTCTGATTTTAACGATCATTAC
ATGACACGGCATGTTCTTGTTTACAGAAAATGTTCACAAGTAGCAGTTTG
TACGGCTACTGCTGTAGTTTTTCTTTTCTTTTCAAATTTGAACTTCATCC
CGCCATCTCTCGAGGGGTGGCTACTGGACCCCAGTCCTCGGCCATGCAAT
ATGCTTCCCCAATAAAAGAACCCTTGAGACTCATCTAGTGGGGGCGCGTG
CGCTGTTTTCGCCAACTGTATTGCTGTCCGTATCACACTGTGCACGCAAT
ACCTGAGCTCTGAGAGCAGGATCCCAAGTTACTACTGTAGGTACTCTTCC
AGACAAAAACATTAATTTATACCGCACTCGCACGTTGGTTGGAAGGTTTC
CCTACTCGAGCTACGTCACAGGGCCTCAGCGTCTCTAAAGTGCGAACAGT
ATCTGATACTTCTGAGGTACTCTTGAAGCTCGACTGCGCAATACTCAACT
CAAGCGAGTTTTTTCTTCCCGCCGTGCGTGAGGACTCCAGAATCGCGAGA
TAATGCCTAGCGCAAAAAAGGAACGGTCAAGGAGGAAGAAGCGAGCGGCC
GCGCCTGGGCGATCGCTTCCTCCCGCCTTACGCGCCGCGGCGGCAAGGCT
TGAGGCGGCCAACGCTGTTTCTGATCTGTCCACCGGAATGGAGGCGTTCT
TGTCCATCGATCTGCCTGCCGTCCAAGTAGCAACGGAGTCCGAAGGTAAC
GGTGTGCCGCAACAGTATTAATAGTACCTGTACTGTACTGTATACCTGTA
CAGGGTGAGGTGTGTTCGGCCTTTGTGAAGCCACGCATTTTTCCATTAAT
AGTTAGAAGGACTGAACCATTAGACTAACTGTACTAAGACGTTATTTTTA
TTTTTATTTTATTTTAATCACACTTATAGCCGATGGACCTCTAATTACCA
TCCTGCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCT
TGCAATTTTTATCGCGATGCAAGTTCAGCACTCTTGCAACTCGTCAACCA
ATGGTTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTTACGAAAGAA
AGAACACAAATTCTGCTTAAGCTAAGAATCGAACTCACGACTTCCGCACT
ATTATAGCAGGTATGCAGGTTACCTACACCACTCGGTGCTAGGTTGTTGT
TGTTTACCTCACATTAACTGATCCGCTACGAATCGAATCCAGCCCGTGGT
CACAAGATAGACGGAACCAAACCAAGTCCGGTCGGGGACACGGTAGGAGA
AAAAAAAGCAAGGAAACGGGCAGGAATGTAGCCAGCAAAAAAAATGGTCG
CCAGGAAGGGACACAGAAGAGGGGGGGGGAAATAAAAAACGAAGAAAAAC
GAAGAAAAAAATGCACGAACAAAAACAAAAACAAAATCGTCAGCAGGCTA
CGCAAGAAAGGCAGCAAGCAGCGGATTACAACCCAGGCAGGAGACTAGGG
CAAAGACAACGCATGCGATACACAGCGAAAGAAAAACGCCGACAGCAGAA
GGATGGAAATTATATCAAATTATGAGGTACATCTACAGAGTTGTCGAGTG
GTTTAGCTCTAGCTCCTCTAAATAACAAGACATATGCGTTGGGCTCTCTG
GCCTTCTCCCGGTAGGCAACAGTGATCTATCTATCTCCGGGGCACCTCCC
CTCGGCACTGACCGGCTCCCTTGACAAACAGTGCTTGCGGCCGGATTCGA
ACTCACGATTTCTTACATGTGTTTCCAAGGCGGTACCTCTGAGCTACTCA
GTCACGTGACTCAGTAGCTCAGGAGTATCACCTTGGAAACAGATGTTAAA
AATCGTGAGTTCGAACCCGGCTGCGAGCACTGTTTGCCAAGGGAGTAGGT
CAGTGGCGAGGGTAGTGCCCCGGAGATATGATAGATAGATTATTGTTGCT
ACCGAGGAGAAAGGCCAGAGAGCCCAAGGCAAATCTTTTGTTCGCAAGAA
GAGCTAACATATGGTTCGCGTGCATCGACTAGACGCAAACTTATAATTTC
GCCGCATACGGCGGCCACTGTATAAAGTATAAACTGTATACAGCTCTATT
TCCCCAACGCTTTGGAGAAATTCATTTACTGTTGCGGTTCAGTTCGTCGC
CTCTTCATTCTATAAACTTTTGTTCTGTCTGGGGCGAGTTCATTAGAACA
TTTGCAGTAGTGCGTAGGCGGCGCGGGAAGTAACGTCCGTGATGGGACAC
GTTAGGCCGGGGACGGTAAGCTGACATTCCCCAATGGCGGACGGGAGTGG
TTTCTCTCGGCGCATAGGGCCCCTATCCGTTCGTTCAACCTTCGCCCTCA
GGCGATGACTTCACGACATGTTTTCAATCAAGAAACATTCGGCGCCGCCT
TTCAAAACAGGCCCGACGAAGAGGCCCGGACACCACCCGCTCTCAGACAC
AGCGGTAGAACCCTTACACATGGAGATCCGGGCGCCGACGAATCTCTCCA
AGGTCGACGCCCGGAGGATATACGATCTGCTGACGGCGAACATGCGCGAC
CTCTACGTGGAGGCCGGGTGGGGCTGGGACGAGGTGACAAAGAGGCGAGA
GATGGAGCACCATCAAGCGCGCTTCTTGATCGCTCGCCTCGGCGGCACGG
AGGTAGTAGAGGGTCGAGGGGCAGCTCCATCTGAGAAAGCCGCCTTAGCG
GCGGGAGGAGACAGCGAAAGGAGCTTGACGCCCACGAGTGAGCCAAAGGA
CGACGCGATGCGCGCGAGTCTGAACACGGGCGGCGGAAATGATGTTGATG
CGAGAAGGGATCCTGGCGCCGCTCTTGCGGTGGCAGCCGAGGAAGCGACG
ATCGACGAAGGAGGGCGCGGTCAACTGGCGGGCTTTTGCCACTTCCGCTT
CTCTTGGGATCAGGACGACGAGGAGAATGGCGAGGGGGTCGGTGCTTCGG
GCGACGTTCTCTACGTCTACGAGATTCAGGTGGCGCCGTGGGCGAAACGG
CGGGGTCTAGGGCGACGTATGATGCAGGCCCTGGAGGTGAGCTCTCATCG
GCAGGCTTGAACGATGCTCTTTCTTGTGTGCAATCATGCTCTCTGTAAAG
AGCAACTGAAACCGCTCCCTCCTTCCCAAGGGGGAACCAAGGGGGAGAGC
GAAGATCATCGATGCGATCGTGCAGGGAGAGGCCAACTCTCGTTTCGGGG
TGACGCTTGTTGGCGTGGCCAAGAGACACAAATCTGCAAGGGGCGCGCTT
TACTCTGTTTGGTGGCCAATTATAAAAACCGCGTCTCTATTGTTCTTTTG
AAACAAACAATAAATATTACCAACAATAGCCCTCGTCGTCCAAGTGGTCT
AGTAGGTGTAACCTGCACACTTGCTAGTGCGGGGGTCGTGAGTTCGATTC
TTGGCTAAATCAGTATTTTAATTCTTGCTTCCGTAACGGAAAGCGTGAGA
ACGTGAGTAGGTAAAACTCAACCATTGATTGACGAGTTGTAAGAGTGCTG
AACTTGCGTCGCGATAAAAAAATCGTAAGGCGTGAACCGGGGAGAGATGA
GAAGATCCTTAGTGACCACAGGCAGGATGGAGTAAGGCCCATCGGCTATA
AGTGAGATGAAAGAAAAAAGAAAAAAGAAAATTGCCTGTGTCCGATAATG
AGAACGACACGCGAATCACCGAAAGCTGGCGCACTCTATGAACTTCGAAC
GGGCTGCAACACGCCAGGCAGTAGCAGACCTTCTCAAGAGCCGAGGCTTC
GATGTCTCTGGTAGGCGTGACCCCACCGGGGCGCTGCCGTGAAAATGGGT
GAAAATGTCCAACCGCAACTCATTCATAGTCACAGAAACCACCGTCGCGG
CGGTTACACCATGAGCTGCCGCTGCCGTAAATAGCTGCTTGTTGGCGCAG
GTTAAGGCGGCAAGTTCTTGTTGCGGTGTCGGTGCTATCAGGTGTTTTGG
AAGTGTCAGGTCGCCTGTCATCAGTGCTCTCGGAAGCTTAACTTGGAAGC
CTCGATGCTTCCTCAGTGTGATCAATACCCCGGTATCGCGTTGATGAGTC
ACGGTCGCTATCGAGGGGGGAGGGGAGGGGAGGGGGGCAATGTACGCTAA
CTTCGCCATGTTTTCTTCGAAAACCGCCTGTTTTAGAACTAGCCACCCTT
AGCACGTCTTTTGATATCATAGTACTGATGACAAATGGACGATAATATCT
TTGTTACCGTTCGAGTTGCACCGCACATTTTTCCTTTTTGAGTGGGGGGG
TTGGGGGCGGTTATGTTTTCGATATCCATAATCGATTCCGAAGAATTGAA
AAGTTATTATCACTTAACGTGAAATATTATTTTTGTTACCTCTAAGCTCC
TTCATCCGTCAGATATTTGTCGAATCATGCCGCGCGTTTTTGCTTTTATG
CTATGCTTCCGTATTTTTTATTTTTTTTACGAATACAATTTTGCGGACAC
TTCTCTTCTTCATCCTGATATCGAGTAAATCTCACTCATCTTAATATATA
TATATATACGTATAGGTATAGATATATTTATTTTTTAGGCTCATCCCAAG
CCCCGACACGTTCCGTTTCGTCCCGGCGCCTCTCGTGTCACCCCAGCTTT
TGGCAAATAGGCACGGCATGTCTAAGATTATGCTCACCGTCTTCAAGATC
AACAAGCAAGCCATGTCGTTCTACACCAAGAGGTAAGGTTCCTCGCGTTC
GCCCCATCCCTCTCCGCGTACCCCTCGGAGAAAAGAGAGAGAGTGCCCGC
TGTGTATACCGGGAATTCATTAATGCGATATAAAATACACGAAGCGGAGA
CGCACCGCACCGCCCCCGCGTCGTATTGATTAACAAAGTAACCCACCTTG
AGATGCGACTACCGACGGCGCCGCGAGGCATTTTTATGGCCGTTAAAGAT
TTCCTTCTTTTGGCTGATACCAAGCTACCGATACCTCCCCAGCAAATACC
AGGTACGCGCTCGAGTTGCCCTCTTTTTTGCGGAGCCTGTATGCGTAAAC
ATTCTGAAACATCTACTTACACACCCGCTCCTCGTTCTTGTTCGTCCCTC
GGATGTTGGATGTTCAGTCGCTCCCGCCCGGATTTACAAAATGATCGCGG
ATTTCCCCTGTGCTCCTCGCGACCTCTCTTGTCTGTCTTATCATCGTGGA
TTCTTGTACGGACAGGATGAAGTACAGCATAGACGAAGACTCCCCGTCCA
ACTGGGATCGCCCCGACGAAGTGTACGAGATACTGAGCAAGCCGACTAGA
CACTGGGCGGCGCGGGGAAGGAAGGCGACTATGATGCTTGACTGAATAAC
AGACTATCCCCTTCTATTTGCAGCACGATTACAACAGCGCGAGATATATT
TTTATAGAGGATGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig641:176597..182060+

>mRNA_F-serratus_M_contig641.17329.1 ID=mRNA_F-serratus_M_contig641.17329.1|Name=mRNA_F-serratus_M_contig641.17329.1|organism=Fucus serratus male|type=CDS|length=2070bp|location=Sequence derived from alignment at F-serratus_M_contig641:176597..182060+ (Fucus serratus male)
ATGCCTAGCGCAAAAAAGGAACGGTCAAGGAGGAAGAAGCGAGCGGCCGC
GCCTGGGCGATCGCTTCCTCCCGCCTTACGCGCCGCGGCGGCAAGGCTTG
AGGCGGCCAACGCTGTTTCTGATCTGTCCACCGGAATGGAGGCGTTCTTG
TCCATCGATCTGCCTGCCGTCCAAGTAGCAACGGAGTCCGAAGATGCCTA
GCGCAAAAAAGGAACGGTCAAGGAGGAAGAAGCGAGCGGCCGCGCCTGGG
CGATCGCTTCCTCCCGCCTTACGCGCCGCGGCGGCAAGGCTTGAGGCGGC
CAACGCTGTTTCTGATCTGTCCACCGGAATGGAGGCGTTCTTGTCCATCG
ATCTGCCTGCCGTCCAAGTAGCAACGGAGTCCGAAGGCCCGACGAAGAGG
CCCGGACACCACCCGCTCTCAGACACAGCGGTAGAACCCTTACACATGGA
GATCCGGGCGCCGACGAATCTCTCCAAGGTCGACGCCCGGAGGATATACG
ATCTGCTGACGGCGAACATGCGCGACCTCTACGTGGAGGCCGGGTGGGGC
TGGGACGAGGTGACAAAGAGGCGAGAGATGGAGCACCATCAAGCGCGCTT
CTTGATCGCTCGCCTCGGCGGCACGGAGGTAGTAGAGGGTCGAGGGGCAG
CTCCATCTGAGAAAGCCGCCTTAGCGGCGGGAGGAGACAGCGAAAGGAGC
TTGACGCCCACGAGTGAGCCAAAGGACGACGCGATGCGCGCGAGTCTGAA
CACGGGCGGCGGAAATGATGTTGATGCGAGAAGGGATCCTGGCGCCGCTC
TTGCGGTGGCAGCCGAGGAAGCGACGATCGACGAAGGAGGGCGCGGTCAA
CTGGCGGGCTTTTGCCACTTCCGCTTCTCTTGGGATCAGGACGACGAGGA
GAATGGCGAGGGGGTCGGTGCTTCGGGCGACGTTCTCTACGTCTACGAGA
TTCAGGTGGCGCCGTGGGCGAAACGGCGGGGTCTAGGGCGACGTATGATG
CAGGCCCTGGAGGCCCGACGAAGAGGCCCGGACACCACCCGCTCTCAGAC
ACAGCGGTAGAACCCTTACACATGGAGATCCGGGCGCCGACGAATCTCTC
CAAGGTCGACGCCCGGAGGATATACGATCTGCTGACGGCGAACATGCGCG
ACCTCTACGTGGAGGCCGGGTGGGGCTGGGACGAGGTGACAAAGAGGCGA
GAGATGGAGCACCATCAAGCGCGCTTCTTGATCGCTCGCCTCGGCGGCAC
GGAGGTAGTAGAGGGTCGAGGGGCAGCTCCATCTGAGAAAGCCGCCTTAG
CGGCGGGAGGAGACAGCGAAAGGAGCTTGACGCCCACGAGTGAGCCAAAG
GACGACGCGATGCGCGCGAGTCTGAACACGGGCGGCGGAAATGATGTTGA
TGCGAGAAGGGATCCTGGCGCCGCTCTTGCGGTGGCAGCCGAGGAAGCGA
CGATCGACGAAGGAGGGCGCGGTCAACTGGCGGGCTTTTGCCACTTCCGC
TTCTCTTGGGATCAGGACGACGAGGAGAATGGCGAGGGGGTCGGTGCTTC
GGGCGACGTTCTCTACGTCTACGAGATTCAGGTGGCGCCGTGGGCGAAAC
GGCGGGGTCTAGGGCGACGTATGATGCAGGCCCTGGAGCTTTTGGCAAAT
AGGCACGGCATGTCTAAGATTATGCTCACCGTCTTCAAGATCAACAAGCA
AGCCATGTCGTTCTACACCAAGAGCTTTTGGCAAATAGGCACGGCATGTC
TAAGATTATGCTCACCGTCTTCAAGATCAACAAGCAAGCCATGTCGTTCT
ACACCAAGAGGATGAAGTACAGCATAGACGAAGACTCCCCGTCCAACTGG
GATCGCCCCGACGAAGTGTACGAGATACTGAGCAAGCCGACTAGACACTG
GGCGGCGCGGGGAAGGAAGGCGACTATGATGCTTGACTGAGATGAAGTAC
AGCATAGACGAAGACTCCCCGTCCAACTGGGATCGCCCCGACGAAGTGTA
CGAGATACTGAGCAAGCCGACTAGACACTGGGCGGCGCGGGGAAGGAAGG
CGACTATGATGCTTGACTGA
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