mRNA_F-serratus_M_contig64.17313.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A6H5KPN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPN3_9PHAE) HSP 1 Score: 453 bits (1165), Expect = 1.760e-148 Identity = 228/328 (69.51%), Postives = 263/328 (80.18%), Query Frame = 3
Query: 279 LSGGAAFHDRKASSCSIASPSTAQQLNHRSSTGPTGPRHGRWPEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWPLPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKYIVPHREA 1262
LSGG FH ++ QQ +++ G WPE R VL+R LARA SGG+PGA AG+LQV+T MWLRT++NYQCRYG S+VAAA+ELY+QGGVLRFYRGV FALVSNP+SRFGMAAANEGA+ALSDALP + V F TWI SLFAG WRVVLTPLDTCKTVLQVEG +GF L KKV G +GCLYQGATAAA ATAVGYFPWFLTFN+LN R+++PSA +LLRNA IGL SS+SSD+C+NSIRVLK TKQAAAAYD+ +TY AAALV+E DG GL GRGL+TRILANGLQSM+FTVVWRYLH+K++VP REA
Sbjct: 121 LSGGELFHRKR----------EQQQQRLQATAKTNGDATSAWPEARRVLKRCLARAASGGIPGAVAGLLQVVTLMWLRTIVNYQCRYGTSIVAAASELYRQGGVLRFYRGVVFALVSNPMSRFGMAAANEGAMALSDALPMQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGQLGCLYQGATAAAAATAVGYFPWFLTFNFLNGRLRRPSALAGMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDSKVTYSGAAALVIENDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKFVVPRREA 438
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.810e-79 Identity = 143/286 (50.00%), Postives = 186/286 (65.03%), Query Frame = 3
Query: 405 PEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWP--LPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKYIVPHR 1256
P VL ++L +A GGL GA+A V+ V T MWLRT +NYQ R+G S AA T LYK+GG+ RFYRGV ALV PLSRFG AAN G +AL +++ LPV T S A WR+VL P+DT KT++QVEG GF L KK LY GA AA+ AT VG++PWF T+NYL RI K +A + L RNA IG SS+ SD C+NSIRV+K+ KQ++ +TY +AA V+ +DG GL GRGL T+++ANG+Q +MF+V W++ E++ P R
Sbjct: 10 PSASEVLNKALRKALGGGLAGASAMVMNVGTLMWLRTAMNYQYRHGTSTRAAITHLYKEGGIPRFYRGVVPALVQGPLSRFGDTAANTGVLALLESMDSTKGLPVGVKTLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTE---PVTYLQAAKNVIASDGVLGLFGRGLKTKLIANGMQGLMFSVFWKFFEEQFNGPAR 292
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A4D9D315_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D315_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.770e-79 Identity = 141/277 (50.90%), Postives = 185/277 (66.79%), Query Frame = 3
Query: 411 IRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWP--LPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHE 1235
I + R + RA GG+PGA AG++QV+T MWLRTV NYQ RYG S A LYKQGG+ RFY G+ FAL+ PLSRFG AAN+G AL LP+ T + +L AG+WR+ L P+DT KTVLQVEG +G+ L +++ RG + YQG+ A A A A+G+FPWF + LN I+ P+ L RNAFIG ++S+ +D TN +RV+K TKQA A+ +SI+Y + +++ DGW GL GRGL+TRIL NGLQS++FTVVWR L E
Sbjct: 122 IIDIFRIAGKRALGGGIPGALAGMMQVVTLMWLRTVGNYQYRYGTSFREAVATLYKQGGMGRFYEGLGFALIQGPLSRFGSTAANDGCRALLKNFETTRGLPLFVPTAMAALAAGSWRIFLMPIDTAKTVLQVEGNEGYRSLMRRIGRGELSAFYQGSLATAAAAALGHFPWFYVYTLLNEAIRAPAGWLGKLCRNAFIGFVASLVADTLTNVMRVVKTTKQATASL-SSISYAQTVQIILAADGWNGLFGRGLSTRILTNGLQSIVFTVVWRALSE 397
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A7S0UJE9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJE9_9STRA) HSP 1 Score: 270 bits (690), Expect = 8.050e-79 Identity = 142/292 (48.63%), Postives = 189/292 (64.73%), Query Frame = 3
Query: 405 PEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWPL--PVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKYIVPHREAEAAA 1274
P+I + R++ +A GGLPGAAAGV+QV T MWLRT INYQ RYGA A LYK+GG+ RFYRG+ FAL PLSRF A+N+G +AL LP+ A T SL G +R++L P+DTCKTVLQV+ ++GF L ++V G I LYQGA A AV++ +G++PWF+ +N L+A S K L+RNA IGL++S+ SD N RV+K TKQ + TY +++ DGWKGL GRGL TR+LAN +QS++FTV+WR L E++ + AE A
Sbjct: 110 PKIGEIFRKAGRKALGGGLPGAAAGVVQVFTLMWLRTTINYQSRYGAGFFRALAILYKEGGIGRFYRGIGFALFQAPLSRFVATASNDGVLALLAGLPYTKHWAPAITTVFASLTVGLFRILLMPVDTCKTVLQVDSSEGFRALMRRVRAGKISALYQGAAATAVSSTIGHYPWFVIYNGLSAAEWLKSLIPKKLVRNASIGLVASVVSDTLVNVFRVIKTTKQTIGV-NHDFTYSDTIRIIVAADGWKGLFGRGLRTRVLANSVQSILFTVIWRGLAERWGNTNETAEDGA 400
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A7S4HVE3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HVE3_9STRA) HSP 1 Score: 271 bits (692), Expect = 8.920e-79 Identity = 142/284 (50.00%), Postives = 188/284 (66.20%), Query Frame = 3
Query: 411 IRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWPLP--VAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNA-----RIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKY 1241
+ +L ++ R GGLPGA AG++QVLT MWLRTVINYQCRYG + + + T LY QGGV RFYRG++FALV PL+RF AAN+G AL L + T + S G WR++L P+DTCKTVLQV+ +GF L + V RG + LYQGA A A++ V ++PWF T+NYL RI +P+ LLRNA +G LSS+ SD +N++RV+K TKQA + ITY +A +++ DGW+GL GRGL TRI AN LQS++FTV+WR L E++
Sbjct: 147 LSEILGHAVHRGLGGGLPGAVAGIVQVLTLMWLRTVINYQCRYGTTFLQSLTTLYNQGGVPRFYRGMAFALVQAPLARFASTAANDGVEALLGNLEYTKNWGPGKGTVVASAVVGLWRMMLMPVDTCKTVLQVDSAEGFRNLIRGVRRGKVWLLYQGAMAQALSAVVSHYPWFYTYNYLTKHPFVQRILRPA-----LLRNAVVGFLSSVVSDTVSNAVRVIKTTKQAMGSKHV-ITYGEAVGMILAADGWRGLFGRGLKTRIFANALQSVVFTVIWRGLAERW 424
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A448ZHR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHR9_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.630e-77 Identity = 139/278 (50.00%), Postives = 185/278 (66.55%), Query Frame = 3
Query: 420 VLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALP----WPLPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKY 1241
+ R + RA GGLPGAAAGV+QVL MWLRT INYQCRYG S A + LY+ GGV RFYRG+ FAL+ PL+RF A+N+G +AL LP W V T SL GA+R++L P+DTCKTVLQV+ +GF L ++V G +G LYQGA A AV++A+G++PWF+ FN L++ + LLRNA IGL++S+ SD N RV+K TKQ+ + +Y +++ DGWKGL GRGL TR+LAN +QS++FTVVWR L +++
Sbjct: 114 IFRSARRRALGGGLPGAAAGVVQVLALMWLRTTINYQCRYGGSFGHALSLLYRDGGVRRFYRGIGFALLQAPLTRFVATASNDGVLALLAGLPQTRDWTPAV--TTVFASLTVGAFRILLMPIDTCKTVLQVDSREGFRALVRRVRAGRVGALYQGALATAVSSAIGHYPWFVIFNALSSAEWLEALVSSGLLRNAGIGLVASVVSDTVVNVFRVIKTTKQSIGSRH-DFSYGDTIKVILAADGWKGLFGRGLRTRVLANAVQSVLFTVVWRGLADRW 388
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A7S2WCX6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCX6_9STRA) HSP 1 Score: 261 bits (668), Expect = 8.910e-77 Identity = 145/283 (51.24%), Postives = 180/283 (63.60%), Query Frame = 3
Query: 405 PEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIAL--SDALPWPLPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSA--AGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKY 1241
P ++ +L ++ RA GGLPGA A +QV + MWLRT +NYQ RYG S A LYK+GG+ RFYRGV AL+ P+SRFG AAN G ++L S LPVA T S AG WRV L P+DT KTVLQVEGT+G G+L K+ G +Y GA AA AT VG++PWF TFN L +I P GK L RNA IG SS SD +NSIRV+K TKQ + +I+Y +A LV+E DG GL RGL TRI+ANG Q M+FTV+W+Y+ E +
Sbjct: 57 PTMKEILEKAGKRALGGGLPGAMAMGIQVGSLMWLRTTMNYQYRYGTSTKVALQTLYKEGGIRRFYRGVGPALIQGPMSRFGDTAANAGMLSLLNSQESTRDLPVAAKTACASFAAGLWRVFLMPVDTLKTVLQVEGTKGPGVLKNKIKSGGPFVMYHGAVGAAGATMVGHYPWFFTFNTLQEKIPMPGEDEVGKKLARNALIGFCSSFVSDCTSNSIRVIKTTKQTSRE---TISYPQAVKLVIEKDGVSGLFIRGLQTRIIANGFQGMLFTVLWKYMEETF 336
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: F2USX5_SALR5 (MC family transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USX5_SALR5) HSP 1 Score: 259 bits (662), Expect = 1.280e-76 Identity = 149/281 (53.02%), Postives = 176/281 (62.63%), Query Frame = 3
Query: 405 PEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWP--LPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKY 1241
P ++ VL ++ RA GG GAAA V QV T MWLRT +NYQ RYG S AA LYKQGGVLRFYRG+ AL+ PLSRFG AAN G + L D+ LPVA T S A WRVVL P+DT KTV+QVEG G L K+ G LY G+ AA AT VG+FPWF TFNYLNA I + L R A IG SS+ SD +NSIRV K+TKQ A+ ITY +A V+ DG GL RGL TR++ANG+Q MMFTVVW+ L E++
Sbjct: 10 PSVQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQ---AHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEERF 287
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A7S2UB41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB41_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.830e-76 Identity = 138/286 (48.25%), Postives = 188/286 (65.73%), Query Frame = 3
Query: 405 PEIRSVLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAA-TELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDALPWPLP--VAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYLHEKYIVPH 1253
P + S+L++SL +A GG+PGAAAG++QV+T MWLRT+INYQ RYG S + +Y GG+ RFYRGV FALV PLSRF AAN+G AL AL T + +L GAWR++L P+DTCKTVLQV+ +GF L KV G LYQGA A A+ + V ++PWF T+N+L + +RNA IGL+S ++SD+ +N +RV+K TKQA + SI+Y + ++++ DG++GL GRGL TRI+AN LQS++FTVVWR L E++ H
Sbjct: 65 PTLESILKKSLKKAVGGGIPGAAAGLIQVMTLMWLRTLINYQSRYGGSSFRRSFATMYADGGIRRFYRGVGFALVQAPLSRFVSTAANDGINALLPALEMTKQWGPGRTTVVAALVVGAWRMLLMPIDTCKTVLQVDSVEGFRHLMLKVQAGQFSVLYQGAVAQAIGSFVSHYPWFYTYNFLVSINFMHHLISSQHIRNALIGLISGITSDVVSNCLRVVKTTKQAMGS-KRSISYAETISMILNADGYRGLFGRGLKTRIMANALQSILFTVVWRGLAERWDTSH 349
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Match: A0A7S2CJL7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJL7_9STRA) HSP 1 Score: 259 bits (663), Expect = 3.460e-76 Identity = 133/272 (48.90%), Postives = 187/272 (68.75%), Query Frame = 3
Query: 420 VLRRSLARAGSGGLPGAAAGVLQVLTFMWLRTVINYQCRYGASMVAAATELYKQGGVLRFYRGVSFALVSNPLSRFGMAAANEGAIALSDA--LPWPLPVAFATWIGSLFAGAWRVVLTPLDTCKTVLQVEGTQGFGLLTKKVLRGNIGCLYQGATAAAVATAVGYFPWFLTFNYLNARIKKPSAAGKILLRNAFIGLLSSMSSDMCTNSIRVLKITKQAAAAYDTSITYRKAAALVMETDGWKGLLGRGLTTRILANGLQSMMFTVVWRYL 1229
+ R + RA GGLPGAAAG +QV MWLRT +N+Q +YG +M A LY +GG+ R Y+G+SFA+ PL RFG AA NEG +A++++ + P VA T + S+ AG WR+++ PLDTCKT+LQVEG++GF LL +V GNI LY GA A+A+ T VG+FPWF+ FN LN R+ P+ L+RNA IG+++S +SD+ TN +RVLK TKQ+ D ++Y + ++ + G +G L RGL+TR+L N +QS++FTVVWR+L
Sbjct: 48 IFRNAGKRAMKGGLPGAAAGAVQVSMLMWLRTTLNFQYKYGYTMREAFRHLYGEGGIGRLYKGISFAIFQQPLVRFGGAAVNEGMMAINESFDITSPFGVALMTSLASVTAGLWRLLIIPLDTCKTMLQVEGSKGFKLLMIRVRNGNIRYLYSGAYASALTTVVGHFPWFVIFNSLNHRLSVPTPPLMKLMRNALIGMIASAASDVSTNWLRVLKATKQSTIVQD-GVSYVQIIRSIIASHGIRGFLFRGLSTRLLGNAVQSIIFTVVWRHL 318 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig64.17313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig64.17313.1 >prot_F-serratus_M_contig64.17313.1 ID=prot_F-serratus_M_contig64.17313.1|Name=mRNA_F-serratus_M_contig64.17313.1|organism=Fucus serratus male|type=polypeptide|length=462bp MNECVLPYSRGLWFLAHVFLLWMAAVCGVSSVGLDCRYPAGCRRGGLKPPback to top mRNA from alignment at F-serratus_M_contig64:351578..355150+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig64.17313.1 ID=mRNA_F-serratus_M_contig64.17313.1|Name=mRNA_F-serratus_M_contig64.17313.1|organism=Fucus serratus male|type=mRNA|length=3573bp|location=Sequence derived from alignment at F-serratus_M_contig64:351578..355150+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig64:351578..355150+ >mRNA_F-serratus_M_contig64.17313.1 ID=mRNA_F-serratus_M_contig64.17313.1|Name=mRNA_F-serratus_M_contig64.17313.1|organism=Fucus serratus male|type=CDS|length=2772bp|location=Sequence derived from alignment at F-serratus_M_contig64:351578..355150+ (Fucus serratus male)back to top |