mRNA_F-serratus_M_contig6369.17273.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A6H5K2D2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D2_9PHAE) HSP 1 Score: 347 bits (889), Expect = 3.010e-112 Identity = 188/275 (68.36%), Postives = 204/275 (74.18%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISA-----------------------------------EAGGGDSLNRVVVLAATNTPWDLDEALRRR----LEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAG RGS GEHEASRRVKTEL+VQMDG++ V+VLAATNTPW LDEALRRR LEKRIYIPLPTE GRKELFRINLG VEVDD VD D L+ LT+GYSGADVA+VCRDAAMMS+R MKGALE+GLS EI++H++ MKDEL+ AA+TM DFR SL KVSKSVGQADL+KY W KEFGSA
Sbjct: 77 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIVLAATNTPWSLDEALRRRVQRRLEKRIYIPLPTEVGRKELFRINLGDVEVDDDVDLDALAGLTDGYSGADVAIVCRDAAMMSVRRVMKGALERGLSGPEIQKHIMEMKDELA-AAVTMEDFRSSLRKVSKSVGQADLDKYAEWMKEFGSA 350
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: D8LRZ3_ECTSI (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ3_ECTSI) HSP 1 Score: 353 bits (906), Expect = 2.050e-109 Identity = 189/271 (69.74%), Postives = 204/271 (75.28%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISA-----------------------------------EAGGGDSLNRVVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAG RGS GEHEASRRVKTEL+VQMDG++ V+VLAATNTPW LDEALRRRLEKRIYIPLPTE GRKELFRINLG VEVDD VD D L+ LT+GYSGADVA+VCRDAAMMS+R MKGALE+GLS EI++HV+ MKDEL+ AA+TM DFR SL KVSKSVGQADL+KY W KEFGSA
Sbjct: 509 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIVLAATNTPWSLDEALRRRLEKRIYIPLPTEVGRKELFRINLGDVEVDDDVDLDALAGLTDGYSGADVAIVCRDAAMMSVRRVMKGALERGLSGPEIQKHVMEMKDELA-AAVTMEDFRSSLRKVSKSVGQADLDKYDEWMKEFGSA 778
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A7S1XMB5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMB5_9STRA) HSP 1 Score: 308 bits (788), Expect = 3.060e-98 Identity = 158/245 (64.49%), Postives = 189/245 (77.14%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISAEAG---------GGDSLNRVVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
ECKTTFFNVSASTLGSKYRGESE+MVR LF+MARYYAPSTIFFDEID+LAG RG+ EHEASRRVKTEL+VQMDG+S AG GG + V+VLAATN PWDLDEALRRRLEKRIYIPLP+ TGRK+LF+IN+ VE+ + V + L+ EGYSGAD+A VCR AAMM +R M A ++GL+ E++ ++ +D L+ +A+T DF +L KVSKSVG ADLE+Y W KEFGSA
Sbjct: 26 ECKTTFFNVSASTLGSKYRGESERMVRTLFDMARYYAPSTIFFDEIDALAGSRGNANEHEASRRVKTELMVQMDGVSEAAGARDEDGDGDGGATNKTVIVLAATNMPWDLDEALRRRLEKRIYIPLPSATGRKQLFQINMREVELAEDVAVEALAAECEGYSGADIANVCRTAAMMGVRRVMDAARKRGLNGLEVQRELMNNRDALAHSAVTQQDFVEALNKVSKSVGGADLERYDAWMKEFGSA 270
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A7S3YD60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD60_HETAK) HSP 1 Score: 302 bits (773), Expect = 2.010e-95 Identity = 156/242 (64.46%), Postives = 184/242 (76.03%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISAEAGGGDSLNR------VVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
EC+TTFFNVSASTL SKYRG+SEKMVR+LFEMARYYAPSTIFFDEIDSLAG RGS EHEASRRVKTEL+VQMDG++ + V+VLAATN PWDLDEALRRRLEKRIYIPLP GR+ELFRIN+ +V + V D +S +TEGYSGADVA VCRDAAMM +R M A EKGL + I+ ++ KD+L +A +TM DF + KV++SVG+ DL+KY+ W EFGSA
Sbjct: 69 ECRTTFFNVSASTLSSKYRGDSEKMVRILFEMARYYAPSTIFFDEIDSLAGSRGSSSEHEASRRVKTELMVQMDGVTETSADXXXXXXXXXXXXVIVLAATNMPWDLDEALRRRLEKRIYIPLPCAEGRRELFRINMKDCDVTEDVSVDKISEITEGYSGADVANVCRDAAMMGVRRVMAAAREKGLQGSAIQAELMNNKDQLQTA-VTMEDFLTAAGKVNRSVGEQDLKKYEQWMSEFGSA 309
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: W7U5R9_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5R9_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.110e-93 Identity = 157/250 (62.80%), Postives = 191/250 (76.40%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISA----------EAGGGDSLNR-----VVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGS 1186
EC TTFFNVSASTLGSKYRG+SEKMVR+LFEMARYYAPST+FFDEIDS+AG RG GEHEASRRVKTEL+VQMDG++ E G D R V+VLAATN PWDLD+ALRRR+EKRIYI LPTE GRKELFRIN+ +EV D +D D L+ TEGYSGAD+A VCRDA+MMS+R M+ A ++GL EI++ ++A +D+L ++ +T DF +L K+SKSVG DL++Y W +EFGS
Sbjct: 411 ECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A7S2SSB0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB0_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.200e-92 Identity = 158/247 (63.97%), Postives = 188/247 (76.11%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISAEAG-----------GGDSLNRVVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
EC+TTFFNVSAS+LGSKYRGESEKMVRVLFEMARYYAPSTIFFDEID++AG RGS GEHEASRRVKTEL+VQMDG+S+ A G V+VLAATN PWDLD+ALRRRLEKRIYIPLP+ +GR ELFRIN+ +E+ + VD L+ L+E YSGADVA VCRDA+MMS+R M KG+ + ++ ++ K L++A +T DF +L+KVSKSVGQADLE YQ W EFGSA
Sbjct: 323 ECRTTFFNVSASSLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDAIAGARGSEGEHEASRRVKTELMVQMDGVSSAADTEDGEQENEEENGPGKRTVIVLAATNRPWDLDDALRRRLEKRIYIPLPSTSGRAELFRINMHDIELHEDVDLQRLAELSEDYSGADVACVCRDASMMSMRRLMSDVRAKGIGLDAMQRELIQNKAALNTA-VTQEDFILALKKVSKSVGQADLETYQKWMDEFGSA 568
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A4D9D8G0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8G0_9STRA) HSP 1 Score: 310 bits (794), Expect = 4.480e-92 Identity = 157/250 (62.80%), Postives = 191/250 (76.40%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISA----------EAGGGDSLNR-----VVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGS 1186
EC TTFFNVSASTLGSKYRG+SEKMVR+LFEMARYYAPST+FFDEIDS+AG RG GEHEASRRVKTEL+VQMDG++ E G D R V+VLAATN PWDLD+ALRRR+EKRIYI LPTE GRKELFRIN+ +EV D +D D L+ TEGYSGAD+A VCRDA+MMS+R M+ A ++GL EI++ ++A +D+L ++ +T DF +L K+SKSVG DL++Y W +EFGS
Sbjct: 411 ECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAADEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDMDLDALAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: F0Y1I1_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1I1_AURAN) HSP 1 Score: 292 bits (747), Expect = 2.170e-91 Identity = 154/243 (63.37%), Postives = 188/243 (77.37%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISAEAG------GGDSLNR-VVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGSA 1189
ECKTTFFNVSASTL SK+RGESEKMVR+LF+MAR++APST+FFDEIDSLAG RG EHEASRRVKTEL+VQMDG++ +G G ++ R V+VLAATNTPW+LDEALRRRLEKRIYIPLPT GR LF IN+ V+V D V+ D L+ T+GYSGADVA VCRDAAMMS+R M+ A KGLS AE++ + A + + A ++M DF ++ KV SVG ADL+KY+ W+ EFG+A
Sbjct: 78 ECKTTFFNVSASTLSSKWRGESEKMVRLLFDMARWHAPSTVFFDEIDSLAGQRGGANEHEASRRVKTELMVQMDGVAGGSGDAPEDAGAEAAPRTVIVLAATNTPWELDEALRRRLEKRIYIPLPTAAGRAALFEINMKSVDVADDVELDDLAAKTDGYSGADVANVCRDAAMMSVRRVMEAARAKGLSGAEMQRELAANRGAMQ-ADVSMEDFLNAIRKVRGSVGSADLQKYRDWSDEFGAA 319
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A813CYV9_9DINO (Katnal1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CYV9_9DINO) HSP 1 Score: 281 bits (719), Expect = 1.770e-86 Identity = 150/247 (60.73%), Postives = 182/247 (73.68%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISA-----EAGG-------GDSLNRVVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGS 1186
EC TTFFNV+AS L SK+RGESEK+VR+LF+MARYYAPSTIF DE+D+LAG RG+ EHEASRRVKTELLVQMDGIS+ E GG G +VVVLAATN PW LDEA RRRLEKRIYIPLP R LF I +GGVE+D VD + L++ TEGYSGAD+A VCRDA+MM++R + KGLSMAE++E A K ++S+ ++M DF +L+KV SVG ADL +++ W EFGS
Sbjct: 126 ECGTTFFNVTASMLTSKWRGESEKLVRILFDMARYYAPSTIFIDEVDALAGARGASSEHEASRRVKTELLVQMDGISSLQTTGEEGGDGXXXXXGSGTKQVVVLAATNLPWGLDEAFRRRLEKRIYIPLPAREDRMALFHIAMGGVELDPSVDLEALADGTEGYSGADIANVCRDASMMTMRRVLDELRGKGLSMAEMKEAHEAHKADVSTP-VSMQDFVAALDKVRSSVGAADLSRFEEWMTEFGS 371
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Match: A0A3B4ZQ95_9TELE (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZQ95_9TELE) HSP 1 Score: 281 bits (720), Expect = 2.310e-86 Identity = 149/235 (63.40%), Postives = 175/235 (74.47%), Query Frame = 2
Query: 482 ECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGCRGSGGEHEASRRVKTELLVQMDGISAEAGGGDSLNRVVVLAATNTPWDLDEALRRRLEKRIYIPLPTETGRKELFRINLGGVEVDDGVDSDLLSNLTEGYSGADVAVVCRDAAMMSIRHAMKGALEKGLSMAEIREHVLAMKDELSSAAITMGDFRCSLEKVSKSVGQADLEKYQVWTKEFGS 1186
EC TTFFNVS+STL SKYRGESEK+VR+LFEMAR+YAP+TIF DEIDS+ G RG+ EHEASRRVK+ELL+QMDG+ D V+VLAATN PWD+DEALRRRLEKRIYIPLPT GR EL +INL VEV D VD DL++ EGYSGAD+ VCRDA+MM++R ++G LS EIR KDEL +TM DF +L+K+SKSV ADLEKY+ W EFGS
Sbjct: 166 ECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVEVADDVDLDLIAEKIEGYSGADITNVCRDASMMAMRRRIQG-----LSPEEIRA---LSKDELQMP-VTMEDFTLTLKKISKSVSAADLEKYEAWMAEFGS 391 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6369.17273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6369.17273.1 >prot_F-serratus_M_contig6369.17273.1 ID=prot_F-serratus_M_contig6369.17273.1|Name=mRNA_F-serratus_M_contig6369.17273.1|organism=Fucus serratus male|type=polypeptide|length=273bp MDARLLPWHPSAMERSIDVRTAGNGEDHACKSRRRGECKTTFFNVSASTLback to top mRNA from alignment at F-serratus_M_contig6369:12168..23614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6369.17273.1 ID=mRNA_F-serratus_M_contig6369.17273.1|Name=mRNA_F-serratus_M_contig6369.17273.1|organism=Fucus serratus male|type=mRNA|length=11447bp|location=Sequence derived from alignment at F-serratus_M_contig6369:12168..23614+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6369:12168..23614+ >mRNA_F-serratus_M_contig6369.17273.1 ID=mRNA_F-serratus_M_contig6369.17273.1|Name=mRNA_F-serratus_M_contig6369.17273.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig6369:12168..23614+ (Fucus serratus male)back to top |