mRNA_F-serratus_M_contig6364.17271.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 238 bits (606), Expect = 1.150e-69 Identity = 159/359 (44.29%), Postives = 208/359 (57.94%), Query Frame = 3
Query: 198 ISVPGWIKVIEKAINDTEGAIRMPTG*IEALYYTTLGTGKGKRETFMQKPATCMTKFKPLKTEYTKGAAWLYDTPEDVAANLPSGTSPEDALKELERDMWLQSVRSRKDTTKTQETSEFDEWNDLAGGHDGVEGLDTSGGAANWVPLTPAVGAVLAATPRRSNFAAGGSREAMDSLGSLAHMDAAAHLQELAGLGAAGDCTTRGKVKDKPNE-MPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDE----------EVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVEL 1241
I+VPGWIKV E AI D++G + P G +ALYYTTLGTG+ R+TFM+ P TKFK LKTEYTKGA +DT + + L SGT DAL +L DM+ ++ + +E + D + + EG+ SG TPA A S +LA A A +E+A A+G + + + NE +PDDYYYP LLLAC W+ W GNTPSE K LA+SSG RN++S D+ EV I +DNPIGSP AM +N NGDA+SRRQ++A IK+EK KKD +KE+ R E L+TRK+G AAME A+ HVG LS+NIK++V+L
Sbjct: 80 IAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMYRKATKGN----AAKEDAAADIFFNTP--RRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXX-XTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSG--PRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQL 429
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 153 bits (387), Expect = 2.310e-37 Identity = 115/364 (31.59%), Postives = 177/364 (48.63%), Query Frame = 3
Query: 198 ISVPGWIKVIEKAINDTEGAIRMPTG*IEALYYTTLGTGKGKRETFMQKPATCMTKFKPLKTEYTKGAAWLYDTPEDVAANLPSGTSPEDALKELERDMWLQSVRSRKDTTKTQ----ETSEFDEWNDLAGGHDGVEGLDTSGGAANWVPLTPAVGAVLAATPRRSNFAAGGSREAMDSLGSLAHMDAAAHLQELAGLGAAGDCTTRGKVKDKPN--------EMPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
I+VPG+IK+IE A++ EG +MP +YYTTLG+G K +TFM+KP+T +TKFK K +YT+ WL ++ + LPSGT+ +D+L+EL MW +S ++D ++ E ++F L+ G G +D +G A P+T A + + +DK E+P+ + +P LLL ++ W G PSE K L SS G + K +V + +NP+ SP+ MSRLNPNGDA+SR K + ++ R E L+T+KKG AA+E A+ H+ + N+KR+VEL+ ++
Sbjct: 184 IAVPGFIKLIEHALSTMEGPPQMPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTRVWLWLDTNDKNTPSELPSGTNTQDSLEELNDAMWFESDMYKRDKARSDKAGAEVADF-----LSRGAAGS--VDAAGSPAG-SPVTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQEREQDKGGDEGKHEGEEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRSSRRG----------KQRPTRNFQETRKEALKTKKKGLAALEAANTHIETIGANMKRMVELKEAE 525
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.610e-27 Identity = 66/141 (46.81%), Postives = 92/141 (65.25%), Query Frame = 3
Query: 831 EMPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
E+P+ + +P LLL ++ W G PSE K L SS G + K +V + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK +K DK ++ E LET+KKG AA+E AS H+ + N+KR+VEL+ ++
Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAE 166
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 112 bits (280), Expect = 2.260e-24 Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 3
Query: 831 EMPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
E+P+ + +P LLL ++ W G PSE K L SS G K+ +V + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK +K DKE + LET KKG AA+E A+ HV + N+KR+VEL+ ++
Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGG----DVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALET-KKGPAALEAANTHVDSIGANMKRMVELKEAE 255
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 112 bits (281), Expect = 3.780e-24 Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 3
Query: 834 MPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
+P+ + +P LLL ++ W G PSE K L SS G K+ K + +V + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK K +KE ++ R E LET KKG AA E A+ HV + ++KR+VEL+ ++
Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGA----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLET-KKGLAAFEAANTHVETIGADMKRMVELKEAE 271
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.550e-23 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 3
Query: 831 EMPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEAS 1193
E+P+ + +P LLL ++ W G PSE K L SS G K+ K +V++ +NP+ SP+ MSRL+PNGDA+SRRQH+AAIKREK +K DKE ++ R E LET+KKG AA+E A+
Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGG----DVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAAN 233
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 7.450e-11 Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 3
Query: 933 SGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
+GR+K+ K +V + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKRE+ +K DKE + A+ HV + N+KR+VEL+ ++
Sbjct: 43 TGRRKKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE-------------------QAANTHVETIGANMKRMVELKEAE 126
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5K1D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D4_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 1.120e-9 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 1020 MSRLNPNGDAMSRRQHYAAIKREKGLAKKDETDKESKKDRTEFLETRKKG*AAMEEASIHVGVLSTNIKRLVELRRSK 1253
M RLNPNGDA+SRRQH+AAIK+ K +K DKE ++ R KKG AA+E A+ HV + + KR+VEL+ ++
Sbjct: 1 MFRLNPNGDALSRRQHFAAIKQVKEQERKAAADKELQEARXXXXXXXKKGLAALEAANTHVESIGASTKRMVELKEAE 78
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Match: A0A6H5KVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE3_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.560e-7 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 3
Query: 831 EMPDDYYYPNLLLACMWT*WDGNTPSE*K*LASSSGRQKRNKSSAKDEEVDIAEDNPIGSPSAMSRLNPNGDAMSR 1058
E+ + + +P LL ++ W G PSE K L SS G + K +V + +NP+ SP+ MSRLNPNGDA+SR
Sbjct: 31 EVSEWWVFPFLLHTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSR 102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6364.17271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6364.17271.1 >prot_F-serratus_M_contig6364.17271.1 ID=prot_F-serratus_M_contig6364.17271.1|Name=mRNA_F-serratus_M_contig6364.17271.1|organism=Fucus serratus male|type=polypeptide|length=184bp MQKPATCMTKFKPLKTEYTKGAAWLYDTPEDVAANLPSGTSPEDALKELEback to top mRNA from alignment at F-serratus_M_contig6364:5809..8393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6364.17271.1 ID=mRNA_F-serratus_M_contig6364.17271.1|Name=mRNA_F-serratus_M_contig6364.17271.1|organism=Fucus serratus male|type=mRNA|length=2585bp|location=Sequence derived from alignment at F-serratus_M_contig6364:5809..8393+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6364:5809..8393+ >mRNA_F-serratus_M_contig6364.17271.1 ID=mRNA_F-serratus_M_contig6364.17271.1|Name=mRNA_F-serratus_M_contig6364.17271.1|organism=Fucus serratus male|type=CDS|length=1104bp|location=Sequence derived from alignment at F-serratus_M_contig6364:5809..8393+ (Fucus serratus male)back to top |