mRNA_F-serratus_M_contig636.17269.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig636.17269.1
Unique NamemRNA_F-serratus_M_contig636.17269.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig636.17269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig636contigF-serratus_M_contig636:302490..304247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-15_003730.1
Exons3
Model size213
Cds size210
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig636.17269.1prot_F-serratus_M_contig636.17269.1Fucus serratus malepolypeptideF-serratus_M_contig636 302492..304247 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931968.8031445-CDS-F-serratus_M_contig636:302491..3025271622931968.8031445-CDS-F-serratus_M_contig636:302491..302527Fucus serratus maleCDSF-serratus_M_contig636 302492..302527 -
1690964081.472492-CDS-F-serratus_M_contig636:302491..3025271690964081.472492-CDS-F-serratus_M_contig636:302491..302527Fucus serratus maleCDSF-serratus_M_contig636 302492..302527 -
1622931968.8241582-CDS-F-serratus_M_contig636:303575..3036801622931968.8241582-CDS-F-serratus_M_contig636:303575..303680Fucus serratus maleCDSF-serratus_M_contig636 303576..303680 -
1690964081.486534-CDS-F-serratus_M_contig636:303575..3036801690964081.486534-CDS-F-serratus_M_contig636:303575..303680Fucus serratus maleCDSF-serratus_M_contig636 303576..303680 -
1622931968.8602598-CDS-F-serratus_M_contig636:304178..3042471622931968.8602598-CDS-F-serratus_M_contig636:304178..304247Fucus serratus maleCDSF-serratus_M_contig636 304179..304247 -
1690964081.498794-CDS-F-serratus_M_contig636:304178..3042471690964081.498794-CDS-F-serratus_M_contig636:304178..304247Fucus serratus maleCDSF-serratus_M_contig636 304179..304247 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig636.17269.1

>prot_F-serratus_M_contig636.17269.1 ID=prot_F-serratus_M_contig636.17269.1|Name=mRNA_F-serratus_M_contig636.17269.1|organism=Fucus serratus male|type=polypeptide|length=70bp
RFEDAKDATGALVDVPEGEFTVENVINTKRFSITIEACPPGGGGDDALSR
VADGRAVQLMPKSATTKKTP
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mRNA from alignment at F-serratus_M_contig636:302490..304247-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig636.17269.1 ID=mRNA_F-serratus_M_contig636.17269.1|Name=mRNA_F-serratus_M_contig636.17269.1|organism=Fucus serratus male|type=mRNA|length=1758bp|location=Sequence derived from alignment at F-serratus_M_contig636:302490..304247- (Fucus serratus male)
AGGTTTGAAGACGCGAAAGATGCAACAGGGGCGCTCGTTGACGTCCCCGA
GGGGGAGTTCACCGTTGAGGTAAGGCGTGTTTCCCTGGGCGTTTTCACCG
TAGGAAAAGGACAAAAGTTATGGTTGTGAGATACACCGCTCCCGGGGGCC
GTAGAATTATGTAGAAGCGGATATCCAGCTCCGCGGCTTCCTCCGGGTGA
GGGCGAGGGTAGATTCGATCACGTCCCGACCCGCGGCCTTATCCACGACC
GCTTTAGTGTTGCAAACTTCGGGATTTGGGGGGGGGGGTCCCCTGATATT
TCCCGTGTAAAACTTAGGCGTACTAGACGTGGTATCTCGGTTTTATATTT
TTTTAGACAGAAGAAACGCCCTTGATGGAGATAAGAACTCCTTGATGCCG
TTCCCCGTCAAAAGTTCCTCGATGTTTACGGGAAAAGAGGAAACCCCGAA
GCGCCGGTAGGTGTAACGGCAGTCGCCACCCGTCGTTCCACAAAAACACA
GCAGCTCAGTCGCTCCCTTCTCGCTCGCTCGCTTTTGGTTGGTGTATGCG
TTTTTTTTGTACGACAGAACGTCATCAACACGAAGAGGTTTTCCATCACC
ATCGAGGCATGTCCCCCAGGAGGTGGCGGAGATGATGCCCTGAGCCGCGT
CGCGGACGGGAGGGCGGTGCAGGTAAGATAACATTAAATATACTTGCAAT
GTTGCCGAAGGTAGGGCTAATACCATGAACGCAAGCGGGTACTGCACGAG
CAGCACTGTCTGTCGTAATTATAGATGATAGGATGTGGGGTGAACGGGAG
ATTCAGGACGCGTCGCCGATTGACTCGACTTTTGAGTTTTGGGAGCGATA
TCCTGTACCAGTACTACTCAAGCAGCTATAAGGGCAACAGGCATACTGCA
CTAGTAGCATCTTACACTATTAATAGTGTACTGTCTTTGTTTGGGGGAGG
GCGTGTCGTCGTCACCGTTTTTTTTTTTTTTTTTTTATTCTTTTTTTTAC
CTCCCAACGCAACAAAAACACAGAGATTGAGATAGTAGTTTCCCTTTGCT
TTTTTTTTCTTCTTTACTACGCCGAAAGTGCTAGCCAATCAGAAAGGAAG
GATAACCCGGTAAAATATTCTCTGCTCTACCACCGGTATGCAGCGTGTAC
ATGTACTACTCAAGACAACGTTATGTTCTCTGTGTTGGGTGTGTGTGTCC
CACGTGTGTTCGCAAGGTGTCTTGTGTGTACGCCCGAGTAGTCTAGTAGG
TAACCTGCATACCTGCTATTAATAGTGCGGAAATCGTGAGTTCGATTCTT
AGCTTAATCATAATTTGTGTTCTTTCTTTCGTAACGGAAAGCATGAGAAC
GTGAGTAAGTAAAATTCAACCACTGGTTGACTGTAAGCGTGGCCGAACTT
GCATTGCGATAAAAAATTAAAAAAGGACGAGAACCGGGGGGACATAGGAA
AACCTTTCGTGACTACAGGCATTCAGGATGGCAGCGTTGCAGTAGCTGGG
GTTGGTAACCTAGCACGTTGAGGGCCATCGGCCGTAAGTGAGATACGAAC
AAACAAACAAAAAACATCGTTTTACGAAGACAAAGAATGGGCCTCCTGTC
ACTTACGTACGTATTGTGTTATTTTTGACCCCTTTCTCCCCCTCTTCTTT
TCTACCCTGTGCGTTTTTTTCTTTTTCTTCTTTCCTTGATTGAACCGAAT
TATTGAATTTTCACCCCAAGCTGATGCCAAAATCGGCCACAACAAAGAAA
ACACCATT
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Coding sequence (CDS) from alignment at F-serratus_M_contig636:302490..304247-

>mRNA_F-serratus_M_contig636.17269.1 ID=mRNA_F-serratus_M_contig636.17269.1|Name=mRNA_F-serratus_M_contig636.17269.1|organism=Fucus serratus male|type=CDS|length=420bp|location=Sequence derived from alignment at F-serratus_M_contig636:302490..304247- (Fucus serratus male)
AGGTTTGAAGACGCGAAAGATGCAACAGGGGCGCTCGTTGACGTCCCCGA
GGGGGAGTTCACCGTTGAGAGGTTTGAAGACGCGAAAGATGCAACAGGGG
CGCTCGTTGACGTCCCCGAGGGGGAGTTCACCGTTGAGAACGTCATCAAC
ACGAAGAGGTTTTCCATCACCATCGAGGCATGTCCCCCAGGAGGTGGCGG
AGATGATGCCCTGAGCCGCGTCGCGGACGGGAGGGCGGTGCAGAACGTCA
TCAACACGAAGAGGTTTTCCATCACCATCGAGGCATGTCCCCCAGGAGGT
GGCGGAGATGATGCCCTGAGCCGCGTCGCGGACGGGAGGGCGGTGCAGCT
GATGCCAAAATCGGCCACAACAAAGAAAACACCACTGATGCCAAAATCGG
CCACAACAAAGAAAACACCA
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