mRNA_F-serratus_M_contig636.17256.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 2.780e-131 Identity = 215/393 (54.71%), Postives = 264/393 (67.18%), Query Frame = 1
Query: 43 FYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLLITDIPCMIKPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDVVNKYSLRVPPGGYPSP--SLRQDMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIR--TLAEMHLDSLHQQGCYAMTLFDVVVVHAQW 1206
+YAFEAL +HP+ F SYE G FPEI TIDGCAK+ TDN T+QF++AR +R VD D HQL KISMISKM F R+RF+ EA PTF NRISNLM R RGKM GSP+ GD+ +L+ AL I LSSK+ ADLK I+ CF GI+ + K LVQC LW S G G G C+ LFI + G+TAGVEG F DG+MYA+VFQI AES ADAVDV + V P L+ITDIPCM+ PIA+R+ P LL++ GRLPR DGVVS+PA+QH+G + + +++S++ P +PSP S D+ DNIYA YA A S QPH++F LL+R+A +A E VGD R TLAE L SLHQQGCYAMTLF+VV V + W
Sbjct: 49 YYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAE-----VGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAW 436
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE) HSP 1 Score: 254 bits (649), Expect = 2.390e-78 Identity = 133/239 (55.65%), Postives = 175/239 (73.22%), Query Frame = 1
Query: 34 ERAFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAG-VEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLL 744
++A++AFEAL + PF F S+ G + EIF IDGCAK+ TD+VS QF++AR +R VD DL +++ K+S+ISKM F +RLR++ EA P F PHNR+SN+M+R RG+M P GSPE+GD +L+ AL I LS K ++DL+ I+R CF G GI+ Y TK+ LVQCL +LWES+ G+G C+ LFI +PSGSTAG VEGLF D +M AHVFQI AESPADAVD+L +L V+ C L
Sbjct: 72 KQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYCTL 309
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE) HSP 1 Score: 242 bits (617), Expect = 3.750e-74 Identity = 129/237 (54.43%), Postives = 160/237 (67.51%), Query Frame = 1
Query: 40 AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGTCTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLLIT 750
A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS QF++ARV+R VD +L +++ K+SMISKM F + LR++ EA P F P P GSPEDGD +L+ AL I LS K+ DLK I+R CF G GI+ Y TK+ L QCL +LWE + G G+ C LFI +PSGSTAGVEGLF DG+M AHVFQI AESPADAVD+L +L VS C L T
Sbjct: 27 AYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELADGEGE-RCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE) HSP 1 Score: 230 bits (587), Expect = 6.630e-68 Identity = 152/364 (41.76%), Postives = 200/364 (54.95%), Query Frame = 1
Query: 238 MISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCF---RRGSGIASYSTKKD------------LVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLLITDIPC----------MIKPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDVVNKYSLRVPPGGYPSPSLRQDMRQDN-------IYAAYAGAEPSPHVQPHIDFRKLLRRTAMAA-------AGEGGANRVG-DVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVVHAQW 1206
MISKM F RLR++ EA PT SPHNRISN+MHR RGK+ P G+PE GD LL AL I LS+KT DL+ I+R C+ R S +S ++ L+QCL R WES+ G GD C+ +FI +PSG T GVEGLF TDG++YA VFQ+ ES AD VD++ + Q S T +P + + R PG GG LPR + V + +QHVG + + + +RVPP +PSP+ + +YAAYA +P P VQPH+DFR LL+R A EG A+ V + I LAE L SLH+QG +AMTLF+VV+++ W
Sbjct: 1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESA-GIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSS-----TTMPADHGYPMHDCTHCREASPRSTPG----GGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTTTASASDAHPAQSVPTVYAAYAVGQPMPGVQPHLDFRALLQRACDVVERNREVHATEGNASGVDWSSSAKRIADLAESTLKSLHKQGWHAMTLFEVVLMYMLW 354
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.220e-67 Identity = 110/206 (53.40%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 40 AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGM 654
A++AFE L +HPF+F SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM F++RLR+++EA PTF NRISN+M R RGK PP GS E GD +LL AL+G G++ L+ KT+ DLK I+R CF G GI++Y+ K+D + C +LW + G + C+ +FI RPSG TAGVEGLF DG+
Sbjct: 29 AYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.180e-60 Identity = 139/400 (34.75%), Postives = 192/400 (48.00%), Query Frame = 1
Query: 40 AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLLITDIPCMIKPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDVVNKYSLRVPPGG--YPSPSLRQ-----DMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVVHAQW 1206
A++AFE L +HPF+F SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM+ D + C +LW + G + C+ +FI RPSG TAGVEGLF DG++ +H+ Q++ P W +P +L+TDIPCM+ P A++ PGLLQ+GG LPR G VS+P +QH+G D +++ +RVPP G + S S D + N+Y A+A A P VQPHIDF LL+ G + P + I LAE L LHQQGCYA+ LF+VV+ +A W
Sbjct: 19 AYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKME----------------------------------------------------------------------------------------DFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATALSGP-VQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKR-ISELAETSLRYLHQQGCYALNLFEVVLAYALW 328
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE) HSP 1 Score: 176 bits (445), Expect = 8.410e-50 Identity = 87/167 (52.10%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 232 ISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQV 729
+SMISKM F++RLR+++EA PTF NRISN+M R RGK PP GSPE GD +LL AL+G G++ L+ KT+ DLK I+R CF G GI++Y+ K+D + C +LW + G + C+ +FI RPSG TAGVEGLF DG++ +H+ Q+ +ESPAD VD + +L V
Sbjct: 1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAV 167
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE) HSP 1 Score: 168 bits (425), Expect = 3.500e-47 Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 34 ERAFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYI 465
++A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS QF+ AR +R VD DL +++ K+SMISKM F +RLR++ EA P PHNR+SN+MHR RG+M P GSPE+GD +L+ AL I LS K+++DLK I
Sbjct: 25 KQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.470e-46 Identity = 98/226 (43.36%), Postives = 138/226 (61.06%), Query Frame = 1
Query: 565 RGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLLITDIPCMIKPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDVVNKYSLRVPPGGYPSPSLR---------QDMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIRT--LAEMHLDSLHQQGCYAMTLFDVVVVHAQW 1206
+G+G C+ LF+ +PSG+TAGVEG F TDG+ FQ+ ES AD VD+L ++ V PCL+ITDIPC I PIA+R+ PGLLQDGG LPR +G V + +QH+G + + +++ ++VPP G+P+ + AE +P VQPH+DFR LLRR AA + A V D +R LAE L+ LH++G YAMTL++VV+++ W
Sbjct: 4 QGEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRR---AADAQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLLYYLW 226
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.670e-43 Identity = 89/172 (51.74%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 232 ISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIADLKYIFRQCFRRGSGIASYSTKKDLVQCLPRLWESSSGRGDGT-CTTLFIERPSGSTAGVEGLFATDGMMYAHVFQILAESPADAVDVLWYLQVSPCLL 744
+SMI KM F +RLR++ EA PTF PHNR+SN+MHR RG+M P GSPE+GD +L+ AL + LS K+ + LVQCL +LWES+ G+ C+ LFI +PSGSTAGVEGLF DG+M AHVFQI AESPADAVD+L +L VS C L
Sbjct: 1 MSMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLVSYCAL 148 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig636.17256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig636.17256.1 >prot_F-serratus_M_contig636.17256.1 ID=prot_F-serratus_M_contig636.17256.1|Name=mRNA_F-serratus_M_contig636.17256.1|organism=Fucus serratus male|type=polypeptide|length=402bp QHRRPQLSRASERAFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATback to top mRNA from alignment at F-serratus_M_contig636:32770..34647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig636.17256.1 ID=mRNA_F-serratus_M_contig636.17256.1|Name=mRNA_F-serratus_M_contig636.17256.1|organism=Fucus serratus male|type=mRNA|length=1878bp|location=Sequence derived from alignment at F-serratus_M_contig636:32770..34647+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig636:32770..34647+ >mRNA_F-serratus_M_contig636.17256.1 ID=mRNA_F-serratus_M_contig636.17256.1|Name=mRNA_F-serratus_M_contig636.17256.1|organism=Fucus serratus male|type=CDS|length=2412bp|location=Sequence derived from alignment at F-serratus_M_contig636:32770..34647+ (Fucus serratus male)back to top |