mRNA_F-serratus_M_contig634.17237.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig634.17237.1
Unique NamemRNA_F-serratus_M_contig634.17237.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig634.17237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig634contigF-serratus_M_contig634:123623..129488 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size793
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931960.2446682-CDS-F-serratus_M_contig634:123623..1243321622931960.2446682-CDS-F-serratus_M_contig634:123623..124332Fucus serratus maleCDSF-serratus_M_contig634 123624..124332 -
1690964077.1736217-CDS-F-serratus_M_contig634:123623..1243321690964077.1736217-CDS-F-serratus_M_contig634:123623..124332Fucus serratus maleCDSF-serratus_M_contig634 123624..124332 -
1622931960.2638757-CDS-F-serratus_M_contig634:129405..1294881622931960.2638757-CDS-F-serratus_M_contig634:129405..129488Fucus serratus maleCDSF-serratus_M_contig634 129406..129488 -
1690964077.184307-CDS-F-serratus_M_contig634:129405..1294881690964077.184307-CDS-F-serratus_M_contig634:129405..129488Fucus serratus maleCDSF-serratus_M_contig634 129406..129488 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig634.17237.1prot_F-serratus_M_contig634.17237.1Fucus serratus malepolypeptideF-serratus_M_contig634 123624..129488 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig634.17237.1

>prot_F-serratus_M_contig634.17237.1 ID=prot_F-serratus_M_contig634.17237.1|Name=mRNA_F-serratus_M_contig634.17237.1|organism=Fucus serratus male|type=polypeptide|length=264bp
EDGAGSSGTKKSPAKRPATKTSHSSKITLESKPKNKTSPTPRKGRNKSSP
DEDRKGKEEGGDDHAAVEAVSGPVQQPRRAAASSSPASRKKHGTGKEETA
VAKGGGETSRYPAVADSPKGKRAARALAAVPSAASQAPSSSSTSSRRPAR
RSSSKKVNYRDHNGEGEEDDENEDDAFSDPGQEDESEHDDDEEDRDDSDA
DFFDKPSSFSPSSSRKRKSSSSSASVKRTATAKGNKPATKKRMVVDISDE
NEDDGGDVDEDEKP
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mRNA from alignment at F-serratus_M_contig634:123623..129488-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig634.17237.1 ID=mRNA_F-serratus_M_contig634.17237.1|Name=mRNA_F-serratus_M_contig634.17237.1|organism=Fucus serratus male|type=mRNA|length=5866bp|location=Sequence derived from alignment at F-serratus_M_contig634:123623..129488- (Fucus serratus male)
GAGGATGGCGCTGGGAGTTCTGGCACGAAAAAATCTCCGGCTAAGCGCCC
TGCCACCAAGACCAGCCACTCCAGCAAGATAACGTGAGATTAAGCCCTAT
CAGGCACTATGTATTGTGCAGAACTCCGCATTCTGTAATGTTCATTGGAA
TATTTTTCACTCGTCCATCAAGCGGCGGTTGTGGACGGATGTCTGCCCAT
ATCGTCTTGGCTTCATGACACAGCTAGGACTCGACACTATCATACCGTCT
AAAAATATTATATTCATACTCTAACTGTAGTATAACACAGGCGCAACCTG
TTCGTGATTCAGACTCTTGAACAAATTTGAAAAACGAATTTGAAACATGC
AAACATTACATTGTACCATTATATAATAAATAGCATAGAAAAGGGCTTGC
GCGCGCATTTTCTGTTTACGCATTTCGAGATCACTACTAATAGATCCACC
CTCCTTCGTTTCAAGTAATTATATGGTCATTACATATCGCAGAGTATAGA
TCAACCGGGTAAGGTTGCCAATCCTGCTCGTGCTCAGCTGAACAGGGATA
ATGAATATTCCCCTGTCCCCATGCGTGCCTGATAATTTGGTCTCGCGAGG
CGGGTTCAGCCGTCCCGTCCCGCGTCAACCTGCTCATCTCCATACTCAGG
CTGAATCTGGTGCCTACTTACGGGATCCCTCCCGAGTTCCGCGGCGGCGT
CCATTTATGAAACCGCCATACGCCATCGGGTTAGTCCCGAGTTTATCGGG
TCACGCAATTGCGTACCGATGGCGTTCACTGCTGGGAGTCCGCCGGCACA
GGGCCAGTAAACCTTAAGGTAGTTCCGAACGAGTGCTGCCTTGGGAGGTC
ACTATGGACCAATTAATATGCGCATCTCTTTCCCATACCCACTATTGGTA
TGAAGTGGGCATGTTGAAAGCACCGGCGCCAACACAGTATAATGTCGGGG
GGAAGCCCACCGCTATATGTACTGCTGTACACTTACATCAATCGCCATGC
AGGGACGCCAAAAAATACTTCAACAAAAACATTATATGAATATAAAGTAC
ATACCTCAATCAAAAACAACCAAAAACAATGTATACTGGCCCCCCCGGTA
GCTCAGAGGTACCTCGTTACCTTCTGACACGTTGGGACGTGAGTTCGATT
CCGGCAAACGGGATTTTTCTCACTAAAAACAAAAAAACTAAAATAAAATG
CCCAACGGGTGGAGAACGATAAATTCGTTAGTACACGACTTTCACGGTCG
ACGAGGGAAAGGAATGGCTGAATCCTTATCACGATAAAAATTAAGGCACG
CACCGCAGAAGGAAGGTGGATGAGAAATCCTTTGTGACCTTCCTCCTGAT
GTGAATGGATGGGAAGAAAACCCACACTGGTACGTCCATTGATGTCCAGA
ATGGATGGGAAGAAAACACACACACACACACACACACACACACACCATAG
TCTAGTCTAATTAGATAGGATAGTAATAATATACGATAATAGTGACATCG
CACCATACACCAGTAGGGGCTACTATTAATAGTCTAGAACACAAGGAACG
TTATGATATTATAGCTGATGAGGAGTGATTGATTTTGGTTAAGGTAAAGG
ACACCTGATGGTAGTGGTGAATACATGGGGTTTGGGTTAAGGATTGAAAC
AGCATAGTAATAGTAATAGGGCAGAGAGGACCACCATCGTAGATATCTTC
GACATGACATAATCCAGCAAGTACGAGACACCTGAAAGTAGATGACGAGA
AAATAACAGCTTGTAAATAGTAAATACTAAATACGTACTTGTACTTCTGA
AGGCTATTAATAGTGTGTATGTAATGCTAAAACAAGGTCTCATCTCCCGC
GTTGCCTCAGAGTGGACAGCTGTAGTGCATGCATGACCTTGGATGTATTG
CCTGTCGTGTTCTGGAAGAGAAAGGACAGCAGGGCAAGCAAAGGCTCCGA
ACAGCTTTGGAATTGTCTTATCAAAGTAACCCTGCGTCAAGAGCCTTATA
CAGTTGAACTCCGTACTATTATAGTTCTGCAGGTATAATACCGTCGAGTG
GAATCCGTCGCAGAATCAAGGCCTTCGCGTAGGAAAGTTTACCAGAGCAC
GTCCCGTGTCGGCTTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTA
CTTACGGATTCGTCCCTATTCCCGCGGCGGCGTCCATTTACTTATTTAAA
CCACCACACGCTATCGGGCCAGTCCCGAGTTTATCGGGCCACGCAATTGC
GTACCGATAGCGTTCACTGCCGAGTGTCCGCTGGCACAGGGTCAGTAAAC
CTCAAGGTAGTTCAAAACGGGTGCTCCCTTGGCAGATCACCATGGACCAA
TCAATATGCGCGTCCCTCTCCTACACCCACTGATGGTGTGAAGTGGGCAT
AATGGTAGTACCGGCGTAAATATACCAGTTATTGGAACCTTTGAGCTCCT
TCTTTGGTTTGGGTGGAATTGATGACAAGAAACGGTAAACAATAATCCAG
GTATTCATACCTCCGGCATTCTCTCACGGTACAGTAGTATAATAGGTGTT
CCCGTCCTCCAGAGCACTTACCGAGGTACCAGGTACTCACTTCTGTACTG
TACAAGCGAAGAGTACGTAAACGACGGGGACATGTAAAGCACTTTCGTAT
CAGGTTTAGATTCGCACGGTACTGCCTGGATAGATTTGCACGTTCGCTCT
CCATATAGTCTGCGCTAAATATATCCAGTCCGCCGAAATAATCCGAAAGC
CCCAGCGCCCCTCCACCCGCAAAGCAGTTGGCCCGCTCTTCTTCCGTTCC
ATTCCGTCCTCTCCTCCTCGCCCCATGGGAATGCATCCCTCCAATAAGGG
CCAGCATGGGTATCCGTTGTTGGGCGTGCATGCGCATGACCACTTATTCC
GTCCCCTGTCCCCGGGTAACAAAAAGGTTACCCAGTATCTTAAATGCATC
CATGATACTGTGCCAGGCATATTTTAGGAGGGGCTAACATATGCCAGGTT
TTTATATTAACTACGAAGTACTTGATAGTTCATATTATAGTAACACCGCA
AAGCTAGGAGTGGGCCCCGCAGGGCTAGGAGCGGGCCCTCTGTTCCCGGT
GGCTTCTCTTCTCAACCACTAGAACATTAGAACTACTTGGTACCAGGGAA
TAAGGGTGGGCCCCGCAAGACTAGGAGTGGGCTCCACAGCAAGGGATTGT
GCAGAACAACGCTCCCGCCAACATTAATTACCTCCTCGTTCTTTCAGTCG
TTTCTGTTCTTTCGCAGTCGATTTCCTGTAGGACGTTCTTGTACGAGAGA
ACGAGATCGTTCCGCGATCAACCTCGGGCTCTGACACGGTAATGCTCGTT
GTTGGGTGTACATGCGCATAACCACTCCACCTCGCCCCCTGTCCCCGAGT
AACAAAAACACTCTAATGAAAACGTCCATGATATACAAGTACTGAAAAAT
ACGAGGTTTATTATTTTTGTTACTGGCGGCCTGACACATGCCAGGCGTGC
AGTCGATTTCTTGTAGGGTGTTCTTGTGCGAGAGGACGAGATCGTCCCAC
GATCAACCTCGCGCTCTGACACAGTAATACGCAATCAGAGCGGTGTGCGG
TGTGCGGTGCGCAGCTCGTTGTGCTCTTGAGACGTGGGATCCATAATACG
CTGCCGTAAGAGGAGAGCTTCGCAGCGGCCTCGTCTCTCATCGTCCGGGT
CGTTTGAGGCCAAGCTGCACGGTGGGAAGAACTGTCGGACAGTTTTCCTC
TGCAGTACGCCGATTTCCCTGGAAATCATTTACTTCCTTGCGTGTCCGCC
CGCCGACCTCTCAGCTGAGACGTCCTGGGTTTCTAAAAGGGCACCTCCAG
ACAATCCTTAAGAGTATTTGTTTTGTCTGTACCGTTTGCCCGCTGATATA
TAGTTGAAGATCAAATCCGTATGCGTGCTTGGGACACTTCCCTTCTCTTT
TTCGCAACGCCTATTAATAGCGGCCACCACTACACGGCGCAGATACAGTC
GGCCGCGTGCAGCACACTTCCGCACACATTGCGCATCGTTTTTGCAGTTT
AGAGCGATTTTCGCGGTCGGCGACTCGGGCAGATGCACCAGGTCAGCGAG
CACGTCCGCAACCCCACGCCAACCTTTGAATAGCGATGAGCAGTGCCGCA
GGAGGAATATTTCTCGCAACTTCTACCGCAACCCCGGTTGTACTTAGAAG
AAGGAGTACCAATGTGCTGCTATGCTGACTTTAGTTGCCTCCCTGTTGCT
GTCATGCTGACTCTGACTCTCTTGAGATGACTCTCTTGAGATGGGGGAAG
GGGGCGGGACTCCGTTCCTTTCATGTAGCAGTCAGTCCATTTATATTTGT
CTTGAGTCACATGTTAGAGCTAAAACAACGACAAGGACAACGTCGCCGAA
GACTAGACCTACGAATAAAGTGATGGCCCTCATTCCGCAAAACAAGGGCC
AAGTAGATGTACCGTATTATATTATAATAGTGAGTGCATAATCTCATAAT
CTCATAATCTCTTGGTCTGGTGCAGTCCACGGAGGGGACCAGACGAGTAC
TAGTTTTGTGTAGAAGGCGTTAGAACAGAAATTCAGGAAATTGGCATAGT
TGACCAAAAGTTTCGTTCAAAATATTTATGCTCGGGGTGCATGCGCCACT
GGCTTCGGGCGCCACTGATTCGAGAACTATTTTATTTTTTATTTTGGCCA
CCCTCTCACTCACATGAGGTTTAAAAAAAAAATGGCGTTCTTCATGTGCG
CGCGGCGATGTGTTAAAAGCTGGTTGTCCGAGAAGGGGTGCCCCCTGGTC
AACGGTCAACGGTCAACGGTCAACGGTACTTAAATATAAGGACATAAGAC
ATATTTCCCCCAGAACCGACACTTCGCAAAGAAGGAAAACAGAGTATGCG
AAAAGTGCCACTCAAGGTCACGCAACGCGCCCTCTTTCTGAGCAATGGTA
TGACGGGAAGAACCTGGTTTTACCGTCAGGAACAAAGATAAAGTTTTTCT
GTGTAATTGAAGACTTATTTTCCTGTACCACCCGTTGTAGTACCGTACCA
CTGTAGATGGTATGGTACACGTAAGTCGCCCGGCAGTGCTCTCTTTTCCT
TTTTTCAAAAGGCGATGTTTCGTTTGCATGTACTGTATTCACGTCATCCC
GCTCAGGCTGGAGAGCAAACCAAAAAACAAGACGTCGCCGACGCCGAGGA
AAGGTAGAAACAAATCCTCCCCCGATGAGGACAGAAAGGGGAAAGAAGAA
GGGGGAGACGATCATGCGGCGGTCGAGGCCGTGTCGGGCCCCGTGCAACA
GCCCCGCCGGGCGGCGGCCTCGTCGTCCCCCGCGTCACGTAAGAAGCACG
GGACGGGAAAAGAAGAAACGGCGGTGGCGAAAGGCGGGGGGGAAACGTCG
CGATACCCGGCGGTGGCGGACAGTCCGAAGGGGAAGAGAGCCGCTAGGGC
TTTAGCGGCCGTTCCATCCGCCGCATCTCAGGCACCGAGCAGCAGTAGTA
CTAGCAGCAGGAGGCCAGCCAGGAGGAGCTCTTCCAAGAAAGTGAACTAC
CGCGATCATAATGGTGAAGGGGAAGAAGACGACGAGAACGAGGACGACGC
TTTTAGCGACCCCGGGCAGGAGGACGAAAGCGAGCACGACGACGACGAGG
AAGACCGCGACGACAGCGACGCTGACTTTTTCGACAAGCCATCCTCGTTC
TCCCCTTCTTCCTCTCGGAAGCGCAAGTCGAGCTCGTCCTCCGCTTCTGT
CAAGAGGACGGCGACGGCGAAGGGTAACAAGCCGGCGACCAAGAAGCGCA
TGGTGGTGGACATCAGCGACGAAAATGAGGACGACGGCGGCGACGTTGAC
GAAGATGAGAAGCCGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig634:123623..129488-

>mRNA_F-serratus_M_contig634.17237.1 ID=mRNA_F-serratus_M_contig634.17237.1|Name=mRNA_F-serratus_M_contig634.17237.1|organism=Fucus serratus male|type=CDS|length=1584bp|location=Sequence derived from alignment at F-serratus_M_contig634:123623..129488- (Fucus serratus male)
GAGGATGGCGCTGGGAGTTCTGGCACGAAAAAATCTCCGGCTAAGCGCCC
TGCCACCAAGACCAGCCACTCCAGCAAGATAACGAGGATGGCGCTGGGAG
TTCTGGCACGAAAAAATCTCCGGCTAAGCGCCCTGCCACCAAGACCAGCC
ACTCCAGCAAGATAACGCTGGAGAGCAAACCAAAAAACAAGACGTCGCCG
ACGCCGAGGAAAGGTAGAAACAAATCCTCCCCCGATGAGGACAGAAAGGG
GAAAGAAGAAGGGGGAGACGATCATGCGGCGGTCGAGGCCGTGTCGGGCC
CCGTGCAACAGCCCCGCCGGGCGGCGGCCTCGTCGTCCCCCGCGTCACGT
AAGAAGCACGGGACGGGAAAAGAAGAAACGGCGGTGGCGAAAGGCGGGGG
GGAAACGTCGCGATACCCGGCGGTGGCGGACAGTCCGAAGGGGAAGAGAG
CCGCTAGGGCTTTAGCGGCCGTTCCATCCGCCGCATCTCAGGCACCGAGC
AGCAGTAGTACTAGCAGCAGGAGGCCAGCCAGGAGGAGCTCTTCCAAGAA
AGTGAACTACCGCGATCATAATGGTGAAGGGGAAGAAGACGACGAGAACG
AGGACGACGCTTTTAGCGACCCCGGGCAGGAGGACGAAAGCGAGCACGAC
GACGACGAGGAAGACCGCGACGACAGCGACGCTGACTTTTTCGACAAGCC
ATCCTCGTTCTCCCCTTCTTCCTCTCGGAAGCGCAAGTCGAGCTCGTCCT
CCGCTTCTGTCAAGAGGACGGCGACGGCGAAGGGTAACAAGCCGGCGACC
AAGAAGCGCATGGTGGTGGACATCAGCGACGAAAATGAGGACGACGGCGG
CGACGTTGACGAAGATGAGAAGCCGGCTGGAGAGCAAACCAAAAAACAAG
ACGTCGCCGACGCCGAGGAAAGGTAGAAACAAATCCTCCCCCGATGAGGA
CAGAAAGGGGAAAGAAGAAGGGGGAGACGATCATGCGGCGGTCGAGGCCG
TGTCGGGCCCCGTGCAACAGCCCCGCCGGGCGGCGGCCTCGTCGTCCCCC
GCGTCACGTAAGAAGCACGGGACGGGAAAAGAAGAAACGGCGGTGGCGAA
AGGCGGGGGGGAAACGTCGCGATACCCGGCGGTGGCGGACAGTCCGAAGG
GGAAGAGAGCCGCTAGGGCTTTAGCGGCCGTTCCATCCGCCGCATCTCAG
GCACCGAGCAGCAGTAGTACTAGCAGCAGGAGGCCAGCCAGGAGGAGCTC
TTCCAAGAAAGTGAACTACCGCGATCATAATGGTGAAGGGGAAGAAGACG
ACGAGAACGAGGACGACGCTTTTAGCGACCCCGGGCAGGAGGACGAAAGC
GAGCACGACGACGACGAGGAAGACCGCGACGACAGCGACGCTGACTTTTT
CGACAAGCCATCCTCGTTCTCCCCTTCTTCCTCTCGGAAGCGCAAGTCGA
GCTCGTCCTCCGCTTCTGTCAAGAGGACGGCGACGGCGAAGGGTAACAAG
CCGGCGACCAAGAAGCGCATGGTGGTGGACATCAGCGACGAAAATGAGGA
CGACGGCGGCGACGTTGACGAAGATGAGAAGCCG
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