mRNA_F-serratus_M_contig632.17200.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE) HSP 1 Score: 311 bits (797), Expect = 3.720e-104 Identity = 138/233 (59.23%), Postives = 184/233 (78.97%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDC-VQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEV 699
T ALRV+ P+ +V S PY + W GA DD FE+DL+YCGSYSFCF + +DCG++IA++C E+ C +Q+D +++V PEP+AG+S +GYRVRI+EVGTD FRCSEDFYL++SAD G GG TM+VV P ++++AVAGE YTVEFDYDNGFG+++GRF IDLY + G+GDCG+WVT++CDKP+ GC D++GDY+VVIPA + G Y IRVGLFG+D++Y CS FE+
Sbjct: 22 TEALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI) HSP 1 Score: 306 bits (784), Expect = 5.260e-102 Identity = 145/238 (60.92%), Postives = 186/238 (78.15%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGES-GSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGD---GDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
T AL+V+ P+ TVVS PY + W GAS DD FEIDL+YCGSYS+CFE+ + CG+++A++C E GS C+ Q D +++V PEP+ G S +GYR+RIAEVG+D +RCS+DFYLMSSADA VG GG T++VV PT+D++A+AGE YTVEFDYDNGFG+++GRF IDLY + G+ GDCGTWVT++CDKP+ GC D+QGDYNVVIP + G Y IRVGLFG+D +Y CS FEVV
Sbjct: 23 TEALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAE-CGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVV 259
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI) HSP 1 Score: 300 bits (768), Expect = 5.340e-100 Identity = 140/236 (59.32%), Postives = 181/236 (76.69%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVVPQ 708
T ALRV+ P+ TVVS+ PY + W GAS DD FEIDL+YCGSYSFCFE+ D+CG+++ +LC E C+ Q+D ++V +PEP+ G+S GYRVRI +VGT+ FRCS++FYLMSSADA+ G TM+VV P+S ++AVAG YTVEFDYDNGFG + GRF IDLY + G GDCG WV+++CDKP+ GCHDT+GDY++VIP + G Y IRVGLFG+D+V+ CS FEVVP+
Sbjct: 22 TEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADAS---DQDGPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVPE 254
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 247 bits (630), Expect = 8.180e-79 Identity = 121/233 (51.93%), Postives = 159/233 (68.24%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
+AL VV P+EG VV++ YT++WTG ++ +EIDLYYCGS C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ A+A G AGG + V +P+S A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDY+V IP AG Y IRVG F +D+VYGCS FE++
Sbjct: 6 SALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGS--MCME--DECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.790e-76 Identity = 118/233 (50.64%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
+AL VV P+ G VVS+ YT++W+G + FEIDLYYC S C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ ADA AGG + V +P++ A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDY+V IP AG Y IRVG F +++VYGCS FE++
Sbjct: 19 SALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNS--MCME--DECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 237 bits (605), Expect = 3.880e-75 Identity = 115/232 (49.57%), Postives = 157/232 (67.67%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEV 699
NAL+V PS+G+TV+++ YT++WTG S D+ FEIDLYYCGS C E DDCG ++ LC C + ++VMPEP+ G SG GY+VR+ ++ ++ CS++FYL++S++A VG G T++V +P S +A EYTVEFDYDNG G V RF+IDLY + G+GDCGT+V +ICDKP GC D+ GDY+V IP T AG Y IRV F +D++Y CS F +
Sbjct: 18 NALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGS--MCME--DDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 235 bits (599), Expect = 2.210e-74 Identity = 120/233 (51.50%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV PS + VV++ YT++WTGA FEIDLY+CGS C E D CG ++ LC C + ++VMPEP++G S GY+VR+ +V D CS+ FYLM+S DA G G + V +P A AGEEYTVEFDYDNG G +V RFSIDLY++ GDGDCGT+VT+ICDKP+ GC D+ GDY+V IPA T AG Y IRVG F ++ +YGCS F ++
Sbjct: 18 NALEVVTPSADLIVVADRTYTVEWTGADSG-RFEIDLYHCGS--MCME--DSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 226 bits (575), Expect = 8.390e-71 Identity = 119/233 (51.07%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV+P+ G VV++ YT++WTGA+ ++IDLYYCGS C E D+CG ++ LC C +VVMPEP+ G S GY+V + + + + CS DF L++S +A GA + V +P+ A+AG EYTVEFDYDNG G V RF+IDLY SGG GDCGT+VTTICDKP+ GC D+QGDY+VVIP+ T +G Y IRVG+F +D VYGCS FE+V
Sbjct: 18 NALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSV--CME--DECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDYGCSGDFTLIASTEAP-DATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 216 bits (550), Expect = 5.420e-67 Identity = 112/234 (47.86%), Postives = 154/234 (65.81%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSG-GDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV+P+ G++V+++ YT++WTG S D FEIDLYYCGS FC E D+CG ++ LC C ++VMPEP+AG S GY+V + + + CS DF L++S DA G G ++ V +P+ A+AG YTVE+DY+NG G RF+IDLY G G GDCGT+V T+CDKP+ GC D+QGDY+V IP+ T AG Y +RVG+F +D ++ CS+ FE+V
Sbjct: 18 NALEVVSPAAGISVIADRTYTVEWTGTS-DSRFEIDLYYCGS--FCME--DECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS-GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGY-SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.240e-65 Identity = 112/233 (48.07%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRI--AEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYNVVIPASTAAGFYVIRVGLFGEDAVYGCSQPFEV 699
NAL VV+P G++V+++ YT++WTG + FEIDLYYC S FC DD CG ++ LC C +++MPEP++G S GY+V + AE +D CS+DF L++S DA G G ++ V +P+ A+AGE YTVE+DY+NGFG RF++DLY+ GG GDCGT+VTT+CD+P+ GC D+QGDY+V IP+ T AG Y IRVG+F ++ +Y CS FEV
Sbjct: 18 NALEVVSPDGGISVLADRAYTVEWTGTT-TGRFEIDLYYCNS--FCM--DDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS-GYKVMVKNAEDESD-MGCSDDFTLIASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig632.17200.1 >prot_F-serratus_M_contig632.17200.1 ID=prot_F-serratus_M_contig632.17200.1|Name=mRNA_F-serratus_M_contig632.17200.1|organism=Fucus serratus male|type=polypeptide|length=236bp TTNALRVVAPSEGMTVVSNEPYTMQWTGASGDDLFEIDLYYCGSYSFCFEback to top mRNA from alignment at F-serratus_M_contig632:416278..419186- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig632.17200.1 ID=mRNA_F-serratus_M_contig632.17200.1|Name=mRNA_F-serratus_M_contig632.17200.1|organism=Fucus serratus male|type=mRNA|length=2909bp|location=Sequence derived from alignment at F-serratus_M_contig632:416278..419186- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig632:416278..419186- >mRNA_F-serratus_M_contig632.17200.1 ID=mRNA_F-serratus_M_contig632.17200.1|Name=mRNA_F-serratus_M_contig632.17200.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig632:416278..419186- (Fucus serratus male)back to top |