mRNA_F-serratus_M_contig632.17198.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE) HSP 1 Score: 316 bits (809), Expect = 7.310e-106 Identity = 139/233 (59.66%), Postives = 185/233 (79.40%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDC-VQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 699
T ALRV+ P+ +V S PY++ W GA DD FE+DL+YCGSYSFCF + +DCG++IA++C E+ C +Q+D +++V PEP+AG+S +GYRVRI+EVGTD FRCSEDFYL++SAD G GG TM+VV P ++++AVAGE YTVEFDYDNGFG+++GRF IDLY + G+GDCG+WVT++CDKP+ GC D++GDYDVVIPA + G Y IRVGLFG+D++Y CS FE+
Sbjct: 22 TEALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.700e-102 Identity = 145/238 (60.92%), Postives = 187/238 (78.57%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGES-GSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGD---GDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
T AL+V+ P+ TVVS PYI+ W GAS DD FEIDL+YCGSYS+CFE+ + CG+++A++C E GS C+ Q D +++V PEP+ G S +GYR+RIAEVG+D +RCS+DFYLMSSADA VG GG T++VV PT+D++A+AGE YTVEFDYDNGFG+++GRF IDLY + G+ GDCGTWVT++CDKP+ GC D+QGDY+VVIP + G Y IRVGLFG+D +Y CS FEVV
Sbjct: 23 TEALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAE-CGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVV 259
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI) HSP 1 Score: 306 bits (784), Expect = 2.580e-102 Identity = 143/240 (59.58%), Postives = 184/240 (76.67%), Query Frame = 1
Query: 4 TNALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVVPQGEVL 720
T ALRV+ P+ TVVS+ PYI+ W GAS DD FEIDL+YCGSYSFCFE+ D+CG+++ +LC E C+ Q+D ++V +PEP+ G+S GYRVRI +VGT+ FRCS++FYLMSSADA+ G TM+VV P+S ++AVAG YTVEFDYDNGFG + GRF IDLY + G GDCG WV+++CDKP+ GCHDT+GDYD+VIP + G Y IRVGLFG+D+V+ CS FEVVP+ + L
Sbjct: 22 TEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADASDQD---GPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVPETQGL 258
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 248 bits (633), Expect = 3.720e-79 Identity = 121/233 (51.93%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
+AL VV P+EG VV++ Y ++WTG ++ +EIDLYYCGS C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ A+A G AGG + V +P+S A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDYDV IP AG Y IRVG F +D+VYGCS FE++
Sbjct: 6 SALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGS--MCME--DECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 241 bits (616), Expect = 8.110e-77 Identity = 118/233 (50.64%), Postives = 154/233 (66.09%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
+AL VV P+ G VVS+ Y ++W+G + FEIDLYYC S C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ ADA AGG + V +P++ A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDYDV IP AG Y IRVG F +++VYGCS FE++
Sbjct: 19 SALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNS--MCME--DECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.240e-75 Identity = 115/232 (49.57%), Postives = 156/232 (67.24%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 699
NAL+V PS+G+TV+++ Y ++WTG S D+ FEIDLYYCGS C E DDCG ++ LC C + ++VMPEP+ G SG GY+VR+ ++ ++ CS++FYL++S++A VG G T++V +P S +A EYTVEFDYDNG G V RF+IDLY + G+GDCGT+V +ICDKP GC D+ GDYDV IP T AG Y IRV F +D++Y CS F +
Sbjct: 18 NALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGS--MCME--DDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 236 bits (603), Expect = 7.080e-75 Identity = 120/233 (51.50%), Postives = 152/233 (65.24%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV PS + VV++ Y ++WTGA FEIDLY+CGS C E D CG ++ LC C + ++VMPEP++G S GY+VR+ +V D CS+ FYLM+S DA G G + V +P A AGEEYTVEFDYDNG G +V RFSIDLY++ GDGDCGT+VT+ICDKP+ GC D+ GDYDV IPA T AG Y IRVG F ++ +YGCS F ++
Sbjct: 18 NALEVVTPSADLIVVADRTYTVEWTGADSG-RFEIDLYHCGS--MCME--DSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 227 bits (578), Expect = 3.800e-71 Identity = 119/233 (51.07%), Postives = 154/233 (66.09%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV+P+ G VV++ Y ++WTGA+ ++IDLYYCGS C E D+CG ++ LC C +VVMPEP+ G S GY+V + + + + CS DF L++S +A GA + V +P+ A+AG EYTVEFDYDNG G V RF+IDLY SGG GDCGT+VTTICDKP+ GC D+QGDYDVVIP+ T +G Y IRVG+F +D VYGCS FE+V
Sbjct: 18 NALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSV--CME--DECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDYGCSGDFTLIASTEAP-DATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.450e-67 Identity = 112/234 (47.86%), Postives = 153/234 (65.38%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSG-GDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 702
NAL VV+P+ G++V+++ Y ++WTG S D FEIDLYYCGS FC E D+CG ++ LC C ++VMPEP+AG S GY+V + + + CS DF L++S DA G G ++ V +P+ A+AG YTVE+DY+NG G RF+IDLY G G GDCGT+V T+CDKP+ GC D+QGDYDV IP+ T AG Y +RVG+F +D ++ CS+ FE+V
Sbjct: 18 NALEVVSPAAGISVIADRTYTVEWTGTS-DSRFEIDLYYCGS--FCME--DECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS-GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGY-SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 214 bits (544), Expect = 5.620e-66 Identity = 112/233 (48.07%), Postives = 154/233 (66.09%), Query Frame = 1
Query: 7 NALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEQDDDCGYYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRI--AEVGTDKFRCSEDFYLMSSADAALVGLAGGATMDVVTPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYVSGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 699
NAL VV+P G++V+++ Y ++WTG + FEIDLYYC S FC DD CG ++ LC C +++MPEP++G S GY+V + AE +D CS+DF L++S DA G G ++ V +P+ A+AGE YTVE+DY+NGFG RF++DLY+ GG GDCGT+VTT+CD+P+ GC D+QGDYDV IP+ T AG Y IRVG+F ++ +Y CS FEV
Sbjct: 18 NALEVVSPDGGISVLADRAYTVEWTGTT-TGRFEIDLYYCNS--FCM--DDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS-GYKVMVKNAEDESD-MGCSDDFTLIASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig632.17198.1 >prot_F-serratus_M_contig632.17198.1 ID=prot_F-serratus_M_contig632.17198.1|Name=mRNA_F-serratus_M_contig632.17198.1|organism=Fucus serratus male|type=polypeptide|length=243bp TTNALRVVAPSEGMTVVSNEPYIMQWTGASGDDLFEIDLYYCGSYSFCFEback to top mRNA from alignment at F-serratus_M_contig632:304375..306997- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig632.17198.1 ID=mRNA_F-serratus_M_contig632.17198.1|Name=mRNA_F-serratus_M_contig632.17198.1|organism=Fucus serratus male|type=mRNA|length=2623bp|location=Sequence derived from alignment at F-serratus_M_contig632:304375..306997- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig632:304375..306997- >mRNA_F-serratus_M_contig632.17198.1 ID=mRNA_F-serratus_M_contig632.17198.1|Name=mRNA_F-serratus_M_contig632.17198.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig632:304375..306997- (Fucus serratus male)back to top |