mRNA_F-serratus_M_contig632.17178.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig632.17178.1
Unique NamemRNA_F-serratus_M_contig632.17178.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: D7G1M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M4_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 9.090e-127
Identity = 240/346 (69.36%), Postives = 270/346 (78.03%), Query Frame = 2 
Query:  266 EILGGMRRDRGTGLLGPAERSERRYLRNFDDPNDDLVDAGSGGRSGXXXXXXXXXXXXXXXXXGRNQDNIGADHGIGGEDDAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDT------RRITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWTEDEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLFQ 1285
            E  G  R  +GT LLGPAERSERR+LRN+D   DD +  G GG  G XXXXXXXXXXXXXXXX   +D        GG D   DIDQTIDRYDYL+AFP+P E  AR    G   E ++   GDG  S   + DT      +RITL EVN+IWYSAVPGDE++KT AKESLARE++ARFR P+ D EEV+IS+SEWVRLAR+VI+ TLF KSGLQLKLTLSR  D+VLCRIRAPI+LLER+AARE YRLQFRGEVDPG  FWTEDEIAEE  LYGKDEANETLEKLFQAEKISPNDL +FDEEV PNQW+RR HALERIADRVPV NRFPA+AE++N+DKHRHLFQ
Sbjct:   30 ESPGKARHGQGTPLLGPAERSERRFLRNYD--LDDGITQG-GGIPGGXXXXXXXXXXXXXXXXXXERD--------GGNDGVADIDQTIDRYDYLIAFPHPREQAARAGGRGRRSELSAV--GDGEGSDDSDSDTGGFEAAQRITLTEVNDIWYSAVPGDEVTKTAAKESLAREWEARFRTPSADSEEVSISQSEWVRLAREVIVNTLFEKSGLQLKLTLSRHGDKVLCRIRAPIVLLERQAARESYRLQFRGEVDPGETFWTEDEIAEELRLYGKDEANETLEKLFQAEKISPNDLAVFDEEVAPNQWSRRTHALERIADRVPVVNRFPAYAEYTNDDKHRHLFQ 362
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA)

HSP 1 Score: 309 bits (792), Expect = 3.120e-90
Identity = 186/388 (47.94%), Postives = 234/388 (60.31%), Query Frame = 2 
Query:  209 RPSPCRRTVLCT--SSQQKLREILGGMRRD------RGTGLLGPAERSERRYLRNFDDPNDDLVDAGSGGRSGXXXXXXXXXXXXXXXXXGRNQDNIGADHGIGGEDDAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDTRR----ITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRAPTN-----DPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWTEDEIAEEQSLYGK-----------DEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLFQA 1288
            RP    R +L T  SS Q+L E    ++ D       G  +L P ER+ERRY+R++    +   D     +                    R   N+              +  T+DRYDYL+ FPNP E    R R   D EE    G  G  +H  + D       ITL EV EIWYSAVPGDE++K  A++ L REF ARFR P       +  E+T+SR+EW+RLAR+VII TL+AKSGLQLKLT+SR   +VLCR+RAP+ LLE++AARE YRLQFRGEVDPG DFWTE+EIAEEQ LY K           DEANE LEKL+QAEKISPND+ +FD+E     ++RR+H LERIADRVPVTNR+PA++EF+ + K RHL+QA
Sbjct:  726 RPDVLLRKLLSTDNSSAQELLEFARTVQADSPQFDAHGKRILNPLERTERRYMRSYGHAEEAAADFADIDQEAAADIAVSSTGGACAVGSARGASNV-----------PKFLQLTVDRYDYLIIFPNPAEDKKSRYR---DVEEACSAGDGGARTHAGDADAGEAGTFITLGEVAEIWYSAVPGDEVAKHEAQDKLRREFDARFRTPAEFSNLEESREMTMSRNEWLRLAREVIINTLYAKSGLQLKLTVSRDGSKVLCRVRAPVALLEQQAAREGYRLQFRGEVDPGYDFWTEEEIAEEQRLYSKGKANELSMYALDEANELLEKLYQAEKISPNDIAVFDQEPTDKHFSRRLHTLERIADRVPVTNRYPAYSEFTLDGKDRHLYQA 1099
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A8J2SE39_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE39_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.790e-51
Identity = 115/276 (41.67%), Postives = 160/276 (57.97%), Query Frame = 2 
Query:  500 EDDAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDTRRITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRAPTNDPEEV--TISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWTED------------EIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDE-EVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLF 1282
            + D V  D T D+YD+L+ FP P            D++E+  EG              RI+  ++  +W+ A+PGDE  KT   E L +E+ +RFR  T    E   T+  +    L R+ ++  L  K+GLQL+LTL++   +V CR+RAP+ LLER+A    ++L+FRGEVDPG +FW +             EI EE  LY K++ANE LE L++A K+ PND  +FDE E     W+RRVH LERIADRVPVTNRFPA A+F+   + RHL+
Sbjct:   40 DSDGVQFDPTCDKYDFLLVFPRP------------DDDESEAEGD-------------RISWCQIETLWFQAIPGDEDRKTAGIEWLRQEWVSRFRTDTVSSAEGGDTVPLTALQGLVREHVVDRL-TKAGLQLELTLAQDGSKVFCRVRAPMALLERKADELNHKLKFRGEVDPGPEFWRKSADQDAEGKPIFCEIVEESILYEKNQANELLEDLYRAGKVGPNDAAVFDEAEPTKKHWSRRVHTLERIADRVPVTNRFPAHADFTTAPESRHLY 289
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A7S3NJZ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJZ7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.740e-44
Identity = 108/277 (38.99%), Postives = 158/277 (57.04%), Query Frame = 2 
Query:  500 EDDAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDTRRITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRA-PTNDPEEVTIS-RSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFW-----TED--------EIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEE-VVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLF 1282
            + DA   D T D+YDYL+ F N      +++ +  D+E        G + H   ++  +I    +  +W  A+PG+E  K   ++ L   +Q RF + P  D EE+ +  +SE   L RD II  L  KSGLQLKL+LS    +  C++RAP+ LLER+A + +Y+L+F+ E+DPG  FW     T D        E+ EEQ L  KDE NE L  L++  KI P+D+++FDEE      W+RR+  LERI D+VP TN +PA+A F+ + K RHL+
Sbjct:   36 DSDAAAFDPTADKYDYLIVFKNDK---PKKKISHYDDE--------GQEQH---KEEEKIKWEWLENVWLEAIPGEEDKKEKGRDYLKFLWQQRFGSLPNEDSEEIDMQPKSEIELLVRDHIIDVLSRKSGLQLKLSLSANGRKQYCQVRAPMSLLERKATQLEYKLKFKPEIDPGPAFWQRTDGTYDRAGRPRYIELIEEQRLTSKDETNEALAILYKLGKIGPHDMSVFDEEETTEKHWSRRLRTLERIVDKVPCTNEYPAYASFTGKPKERHLY 298
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A8J2S5F9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5F9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 4.440e-35
Identity = 95/275 (34.55%), Postives = 140/275 (50.91%), Query Frame = 2 
Query:  506 DAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDTRRITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTL-SRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWTE-------------DEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIF-DEEVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLFQ 1285
            D    D T D++DYL+ F       A  R                       R +  +   EV E W+ A+PGDE  KT   E L R++  RF       EE    + + + L R+ ++  L  +SGLQLKL+L S    RV C++RAP+ LLER+A    Y+ +F+ E+DPG  FW               DEI E+ ++  +++A ETL++L+   +  P D+ +F D E  P  W+RRVHALERI+DRVP  N + A+A +    + RHL++
Sbjct:   39 DVAAFDPTADKHDYLLVF-------ATERS----------------------RSSETLKWNEVRETWFQAIPGDEEKKTAGVELLRRDWVQRF------GEEEECPKGDVLGLCREHVVDLLARRSGLQLKLSLPSDGARRVYCQLRAPVSLLERKADALDYKFKFKDEIDPGPAFWRRSSGTDRVSGRPVYDEIIEDATILDREKAQETLQQLYAQGRCGPADVAVFADAEPTPRHWSRRVHALERISDRVPCHNAYAAYAPYDAAPRERHLYE 278
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A7S2DV50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DV50_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.690e-31
Identity = 84/213 (39.44%), Postives = 122/213 (57.28%), Query Frame = 2 
Query:  692 VNEIWYSAVPGDEISKTTAKESLAREFQARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRD-------RVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWT---------EDEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLF 1282
             ++ WY+A+PG+   K  A  +L + +   F    +  E  +I  S+++ L R+ II  L  +SGLQLKL+ SR+RD       ++ CRIRAPI LLE+ A    Y+L  R EVDPG +FW+         E+  A+   +  K EA   LE +++   ISPND+ IF++E  P  W+RR+  LERIAD+VPV+ R   +A F+     RHLF
Sbjct:   49 ASDEWYNAIPGETDRKNKAVLALKQAWMD-FTGNDDVHETTSIEFSKFLELTRNHIIDILMNRSGLQLKLS-SRKRDANGETAEKIFCRIRAPISLLEKRADDLDYKLMLRPEVDPGTEFWSVKNKQTGAYEEIEADANLIESKGEAAGLLETMYENGHISPNDVQIFEDEPTPKHWSRRIRTLERIADKVPVSTRMHPYANFTLRPAERHLF 259
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A7S2Y002_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y002_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.010e-30
Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 2 
Query:  776 ARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWT-------EDEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRF 1234
            ARFR  T    + TI   +W+ L+R+V+I  L  +SGLQ+K+TLSR +  V CR+RAP   L  +A  + +RLQF  EVDP  +FW        E+EI EEQ L  +D ANE LEK + A KI PNDL +F++E    QW+ R+H LERI D V    RF
Sbjct:    2 ARFRV-TRPEADHTIPMEDWLSLSREVVISVLAEQSGLQMKVTLSRDKRYVYCRLRAPARSLMFQADVDNHRLQFCPEVDPSYEFWDPTNKRDEENEILEEQKLVDRDTANERLEKYYDAGKIGPNDLAVFEDET-QLQWSTRLHTLERIMDEVTAEPRF 159
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A7S2BNC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNC7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.180e-15
Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 2 
Query:  986 YRLQFRGEVDPGNDFWT------EDEIA-------EEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRFPAFAEFSNEDKHRHLF 1282
            YRLQFR EVDPG DFW       +DE         EE+ L  K  A E LE++++   I  +++ IF++E  P  W+RR+H LERIAD++P  NR+ A+A+FS     RHL+
Sbjct:    6 YRLQFRPEVDPGPDFWQVQKPGIQDEEEKFVEIKNEEKLLATKAGAAEHLEQMYKNGYIHASEVHIFEDEATPKHWSRRIHTLERIADKIPSCNRWNAYADFSTRPTERHLY 117
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BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A7S2BNB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNB7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.460e-12
Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 2 
Query:  665 DTRRITLAEV----------NEIWYSAVPGDEISKTTAKESLAREFQARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQLKLTLSRQRD-------RVLCRIRAPIILLEREAAREKYR 991
            D RR+  ++V          +E W+ A+PG++ +K    E L + +   F+  T DP+E   S   ++ + RD+I+ TL  KSGLQLKLT  +  D       RV CRIRAP+ LLE++A    YR
Sbjct:   51 DDRRVYWSQVPFTDPEAINASEKWWRAIPGEKDAKDRGVEELRQAWMDHFKTDTVDPDE-NCSYGHFLEITRDLIVGTLIKKSGLQLKLTSRKTVDEDGNKIERVYCRIRAPVSLLEKKADELNYR 175
[Close]
BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Match: A0A024U2L3_9STRA (C2 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2L3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.190e-6
Identity = 69/283 (24.38%), Postives = 121/283 (42.76%), Query Frame = 2 
Query:  497 GEDDAVDIDQTIDRYDYLVAFPNPPEFGARRRRAGSDEEENSGEGGDGHDSHPCERDTRRITLAEVNEIWYSAVPGDEISKTTAKESLAREFQARFRA-PTNDPEEVTISRSEWVRLARDVIIKTLFAKSGLQL-KLTLSRQRDR---------------VLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDFWTEDEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNRRVHALERIADRVPVTNRFPA---FAEFSNEDKHRHLFQ 1285
            G  D+ D++     Y Y + FPN P                       HD      +  RI+ A+   I      G E +K  A     + +  +FR+ P  D +  TI    +  L R+++I+ L +  G+ L   T +   DR               + C +R    LL R+A +    +    E+DPG+++W   ++   +S++  DEA   L ++F   +I  ++  +F  E  P   +RR+HA++RIADR   T   P+   +  F N+   ++L++
Sbjct:   26 GSHDSADVN--FSEYYYALVFPNTP-----------------------HDLADVAGE--RISFADAKTIIRDVTCGGEANKAHAVNEFIQAWVDKFRSVPPIDVD--TIPVGYFRELMRNIVIQRLESLPGISLVTFTSASTIDRSAQLQPGDDTTDAKYIYCLLRVSRELLYRQADQSNILVPIWPEIDPGSEYW---DLHGPESVWTIDEAERELNRMFLQGEIQADEAQLFPNES-PAMVSRRIHAIQRIADRTIQTCYRPSPHMYFAFRNDPAFQYLYR 275
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G1M4_ECTSI9.090e-12769.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL56_9STRA3.120e-9047.94Calcium-activated chloride channel-domain-containi... [more]
A0A8J2SE39_9STRA5.790e-5141.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NJZ7_9STRA5.740e-4438.99Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2S5F9_9STRA4.440e-3534.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2DV50_9STRA3.690e-3139.44Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2Y002_9STRA1.010e-3046.88Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2BNC7_9STRA1.180e-1543.75Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2BNB7_9STRA5.460e-1237.30Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A024U2L3_9STRA1.190e-624.38C2 domain-containing protein n=2 Tax=Aphanomyces i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig632contigF-serratus_M_contig632:19929..24737 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.0
Seed ortholog evalue1.8e-110
Seed eggNOG ortholog2880.D7G1M4
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2514@1,KOG2514@2759
Ec32 ortholog descriptionAnoctamin
Ec32 orthologEc-26_000980.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons9
Model size1303
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig632.17178.1prot_F-serratus_M_contig632.17178.1Fucus serratus malepolypeptideF-serratus_M_contig632 21217..24737 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931950.330459-UTR-F-serratus_M_contig632:19928..201871622931950.330459-UTR-F-serratus_M_contig632:19928..20187Fucus serratus maleUTRF-serratus_M_contig632 19929..20187 +
1690964072.466792-UTR-F-serratus_M_contig632:19928..201871690964072.466792-UTR-F-serratus_M_contig632:19928..20187Fucus serratus maleUTRF-serratus_M_contig632 19929..20187 +
1622931950.3646388-UTR-F-serratus_M_contig632:21195..212161622931950.3646388-UTR-F-serratus_M_contig632:21195..21216Fucus serratus maleUTRF-serratus_M_contig632 21196..21216 +
1690964072.478876-UTR-F-serratus_M_contig632:21195..212161690964072.478876-UTR-F-serratus_M_contig632:21195..21216Fucus serratus maleUTRF-serratus_M_contig632 21196..21216 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931950.389202-CDS-F-serratus_M_contig632:21216..213791622931950.389202-CDS-F-serratus_M_contig632:21216..21379Fucus serratus maleCDSF-serratus_M_contig632 21217..21379 +
1690964072.4961169-CDS-F-serratus_M_contig632:21216..213791690964072.4961169-CDS-F-serratus_M_contig632:21216..21379Fucus serratus maleCDSF-serratus_M_contig632 21217..21379 +
1622931950.4057217-CDS-F-serratus_M_contig632:21720..219051622931950.4057217-CDS-F-serratus_M_contig632:21720..21905Fucus serratus maleCDSF-serratus_M_contig632 21721..21905 +
1690964072.5124311-CDS-F-serratus_M_contig632:21720..219051690964072.5124311-CDS-F-serratus_M_contig632:21720..21905Fucus serratus maleCDSF-serratus_M_contig632 21721..21905 +
1622931950.425778-CDS-F-serratus_M_contig632:22310..223731622931950.425778-CDS-F-serratus_M_contig632:22310..22373Fucus serratus maleCDSF-serratus_M_contig632 22311..22373 +
1690964072.5326605-CDS-F-serratus_M_contig632:22310..223731690964072.5326605-CDS-F-serratus_M_contig632:22310..22373Fucus serratus maleCDSF-serratus_M_contig632 22311..22373 +
1622931950.4473538-CDS-F-serratus_M_contig632:22714..228341622931950.4473538-CDS-F-serratus_M_contig632:22714..22834Fucus serratus maleCDSF-serratus_M_contig632 22715..22834 +
1690964072.5512507-CDS-F-serratus_M_contig632:22714..228341690964072.5512507-CDS-F-serratus_M_contig632:22714..22834Fucus serratus maleCDSF-serratus_M_contig632 22715..22834 +
1622931950.5068138-CDS-F-serratus_M_contig632:22972..230861622931950.5068138-CDS-F-serratus_M_contig632:22972..23086Fucus serratus maleCDSF-serratus_M_contig632 22973..23086 +
1690964072.5618556-CDS-F-serratus_M_contig632:22972..230861690964072.5618556-CDS-F-serratus_M_contig632:22972..23086Fucus serratus maleCDSF-serratus_M_contig632 22973..23086 +
1622931950.5237322-CDS-F-serratus_M_contig632:23373..234571622931950.5237322-CDS-F-serratus_M_contig632:23373..23457Fucus serratus maleCDSF-serratus_M_contig632 23374..23457 +
1690964072.5705554-CDS-F-serratus_M_contig632:23373..234571690964072.5705554-CDS-F-serratus_M_contig632:23373..23457Fucus serratus maleCDSF-serratus_M_contig632 23374..23457 +
1622931950.5416667-CDS-F-serratus_M_contig632:23901..240071622931950.5416667-CDS-F-serratus_M_contig632:23901..24007Fucus serratus maleCDSF-serratus_M_contig632 23902..24007 +
1690964072.579125-CDS-F-serratus_M_contig632:23901..240071690964072.579125-CDS-F-serratus_M_contig632:23901..24007Fucus serratus maleCDSF-serratus_M_contig632 23902..24007 +
1622931950.5568435-CDS-F-serratus_M_contig632:24549..247371622931950.5568435-CDS-F-serratus_M_contig632:24549..24737Fucus serratus maleCDSF-serratus_M_contig632 24550..24737 +
1690964072.589763-CDS-F-serratus_M_contig632:24549..247371690964072.589763-CDS-F-serratus_M_contig632:24549..24737Fucus serratus maleCDSF-serratus_M_contig632 24550..24737 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig632.17178.1

>prot_F-serratus_M_contig632.17178.1 ID=prot_F-serratus_M_contig632.17178.1|Name=mRNA_F-serratus_M_contig632.17178.1|organism=Fucus serratus male|type=polypeptide|length=341bp
MRRDRGTGLLGPAERSERRYLRNFDDPNDDLVDAGSGGRSGGGGEQVGGG
LRGEGGGGGRNQDNIGADHGIGGEDDAVDIDQTIDRYDYLVAFPNPPEFG
ARRRRAGSDEEENSGEGGDGHDSHPCERDTRRITLAEVNEIWYSAVPGDE
ISKTTAKESLAREFQARFRAPTNDPEEVTISRSEWVRLARDVIIKTLFAK
SGLQLKLTLSRQRDRVLCRIRAPIILLEREAAREKYRLQFRGEVDPGNDF
WTEDEIAEEQSLYGKDEANETLEKLFQAEKISPNDLTIFDEEVVPNQWNR
RVHALERIADRVPVTNRFPAFAEFSNEDKHRHLFQARFSH*
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mRNA from alignment at F-serratus_M_contig632:19929..24737+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig632.17178.1 ID=mRNA_F-serratus_M_contig632.17178.1|Name=mRNA_F-serratus_M_contig632.17178.1|organism=Fucus serratus male|type=mRNA|length=4809bp|location=Sequence derived from alignment at F-serratus_M_contig632:19929..24737+ (Fucus serratus male)
AGGGGAGCAGGCATGGAGCCTGGCACGCCGAAAACGGCCGACGATCGACA
TATGTTCTTGGAGACGTAAGAAGGGTCCTCAGCTATAATCGCTTGAGGTC
TGACAAGCCACGCCTTGTTGCTGGGAAATAAGCATCGGCCCACCCTCTGC
GGCCATATTTTGTTTCGTACCACGGAGCCCCAGCAAAACGGCATCAGGGT
TGCACCGACGACCCTCGCCGTGCCGTAGAACAGTTCTCTGTACATCTTCA
CAGCAGAAGGCAGGAAATGGTTGATGTAGAGTTCAGATCACAGATGAGGG
GGAGATGGGTGAAAGCGCTTGATCATGTTCCTTGTTGATGTGGATCACCC
CGCGTGGCGGACGGTATCTTTTGAGGCTGGGTCACGCAGCCTTGTTTGAG
CCCCGGCCCATGAAGCGAACGCTCGCTGGTGTTCTCAACGCCGGATCGGA
AGTGCTGCGCAGGCGTCTCTCCTCGAATTATGGAGTTCCGACGCGAGCGC
AGTCGTTTTTCGATTTTCGCTGGTACAGACAGTATAGTAGCCTGCTGGAT
TACCGGTGCAAAGTAACGGTTACCGGTACCTCTGCAAGATACGGCGGCCC
CGGGTGATGATTCTGAATTTCACTATGATACGTACCCGTACATCTTCCAA
AGTTTACACATGCTCGTTGTACAGCAGTATTTCAAATGTCATCAATTAAG
GCACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGACCTTCCTC
CTGTGTGACCCCGGCTGGTACGTCCAACGAACTTGAATGTTCAGAATGAA
TGGGAAGAAAAACACACACATAAACACACACACATCGATCTGGAAGCAAA
AAAGCTCTGGTCTTTATTCGTACGAGTTGACTTGTCGTCATTGGGCGAAT
CAACTATTGGAGAGGAGAAGAACAGCTATTTCAAACTTGAACACTATTAA
TAGAGCCTAAAGACGTTAGACTGCGTTGTTAGCAGTCCACTGATAGTATG
ATGCTCTTGACCCTCAACAAGGGGTGCTGAGATGATCGTGATACTAAAGA
GCACATGTCCCTTTCTTCGGCGAAACAACTCATAGCTAATGTACAAGCAG
CACTTGGGGTCAACGATCAATTTCGATGTATTTCCTAGAACCACCTTGAC
ACACCCCAATGTGGCAACATTTTTCTAAGAAATAAGATGCGGCCACACGC
ATTCACAACCGCGCCGCCCTCCGATCACGTCCTTCCCTTGACACTGTTTT
TGCCTCAAACGCACCAGCTGCGGGAAATCTTGGGCGGCATGAGGCGAGAT
CGAGGGACTGGTTTACTCGGCCCAGCAGAACGGTCCGAGCGACGATACCT
CCGCAACTTTGACGACCCCAACGACGATCTCGTCGACGCCGGCAGCGGTG
GTAGAAGCGGGGGTGGAGGGGAGCAGGTCGGCGGCGGTTTGCGTGGTGAA
GGTAGGACTGGTATTCTTCTGGATGCCTCCCTTGTGGTCTCGTAAACAAA
GAGCGCGATGGCGGCCGGTCTGCCGCAATTTTTTGTTCTGTTTGGGTCGC
GGCGGCGCAGCAGGATCGGGGCGCACCCCGTGCCTGCGGGCCAAAACCGT
CGGAGATCTTGGAACAAAGTACTTCATTAATGGGATAAAGAGAAAAAATC
GTCCCGATTTGACCTCGCTTGTTTGTTGATGCAATTCATCTTTGTTGTCG
TGGTTTGCTTCACGCTCCCGTTCCAGAAAGTTGCAGAGCATTGCTCAATA
AAACGGTGACATGTTACAATCGGGCAATCCCTTGCTTTGCAGGCGGAGGA
GGCGGGCGGAATCAAGACAACATCGGCGCTGACCATGGGATAGGCGGTGA
AGATGATGCCGTTGATATTGACCAGACAATCGATCGCTACGACTATCTCG
TCGCATTCCCCAATCCTCCAGAGTTTGGGGCGCGGCGGAGACGTGCAGGA
AGCGATGAGGAGGAAAATTCGGGCGAGGTGCGGAGGCTTGGATTTGAAGA
CAACGCTGGAGACTTACCCTCGGCGTGGATGCCCCGTGTTTGAAGTTTGA
CTGCTCTTGCGTTCGACATGACTGCCTGCTTTCTGTATGAGGGTCTGCCC
GGTCACTTCTCTTTAGAGGTGCTGCGGGCCGTCGACCAACAGAGTAGAAA
ATCAACCGGGCGAGCTCGACTTGCCGTCGTTCTATCGCTCCACCCGATCA
AACTTCCCGTGGAGTCTGTCGCATGGCCTGGTTGCTACGGTGTGCTACGC
ACCGCATCAGCAGCTGACAAGATGGATCGATACTGCCGCTTTCTGCCACG
GCACTTGTGCCTTACGTTGCCGCTCGTTTGCAAGATTTCGTCAAGGCGAA
GCGACTACTACTCGGAGTTGGAAGGAGACCAGGGAGGCGATGGCCATGAC
AGCCACCCCTGCGAGAGAGATACCAGGCGTATTACGCTGGCCGAGGTCGG
GGGAGAGAGGTTGCGGATTAGACATGGTTTCAAAATATTTAGCAGGTATC
TTTTAGTATGCATGTGGTGTCGCACTTATTCGACAAGATGATGCTGGTGT
CATTGTAGCCAAGCTTTCCCTTGTTGCGGCTGCCGCTTGTGACCAATTAG
TATGTTTTCTGTTGTTGAGTCGTTTTGATGGTAAACTGCTGAAAGGAGCT
GATATCCTGCAGGATTTGAGAGAAGAGGTTTGGTGACATTCGTGGGAGGA
TCTCTACAGTGCGAAATTCGCTACGCGCCATAGATTGTTTCTCTGCGTAT
TATCCCTAATTACGGTAGATGTGCAAATCGCAACAGGTGAACGAAATCTG
GTACTCCGCTGTGCCGGGAGACGAGATCTCCAAAACTACCGCCAAGGAAA
GCCTCGCACGGGAGTTCCAGGCTCGATTTAGGGCCCCAACCAACGACCCC
GAAGAGGTGCTTCGGCCGCGTCTTGCTTGGAAGTGTATGTCTTTCTGTAC
CAAGGCACGATCGAACCTGTACTCCTAGCCTTCCACTTAGACTTTGATAC
ATATCAAACGCATGTCCCTAGAGCACACCCGCTTTCCGCCTCAGGTTACG
ATATCCCGGTCCGAGTGGGTCAGGCTGGCGCGTGACGTGATTATCAAAAC
GTTATTCGCTAAGTCGGGGCTCCAGCTGAAGCTGACGCTGTCTCGGCAAA
GGGACCGGGTGAGCACGAAGCGGCGCTTGTCTATCCGATCTAGCCCGATT
CCATGGTCCGGTCGGACTTTGACGCCGCCGAAGTCCGCCTGTGCCAAACT
GGTGAAAACACTGGCCAGCCACGTCTCAAGCATTCACCATTGCGCCAAAG
CTCGAACTGATTTCACATCTGGCCGTACCTTTGCCCCAAAATAGTTCGCC
ACCCCAGCCTCCCCCTCCTCGCTCATGGCAAGCATTTTCTTTCCGCCGTT
CGGCGCAACCAAACTTTTTTTTTTTGGGGGGGAGGGGGGGGTCAGGTGCT
CTGCCGGATCCGTGCTCCGATCATCCTGCTGGAGAGAGAAGCAGCGCGAG
AAAAATATCGGCTTCAGTTTCGCGGGGAGGTCAGAACGTTTTGCAAGAGG
CATCTCGCGGACGGCTTATGTAGTATAATAGCTGCATCGGGCAGCAATCC
TCTCTACTGCTCATTCAACGTCCTGCAGTGACATCCTTGGGGTTACCAAG
ATTCCCCTTTCAAGGACAGGACGGAATAGACACGGTAGAGTTTGCTGGAA
CGTGTCGTTGGCAGCGAAAAGCGTGGTCGATCAAAAGGCGTTTTCGGACC
GCATGGTATGCAGCGCGAGCAAGCGAAAGCTACGGCCACACCAAAGCATT
CTAAACTTGCGGCAAAAGCCTTTGTGTAGTTGTTACATATATATTTCACA
TAACCGCGCAATCCAGTCCTGTCGTGCGAGTCGTGTGTTGGCCGTTCCGA
TGTATGTTTGTGTTTGTGAAGCGCGCTGACCACTGTCCTCGGCCTGATGT
CGACTTGCCTCCTAACCTTGAAGGTGGATCCCGGAAATGATTTTTGGACG
GAAGATGAGATCGCCGAAGAGCAGAGTTTATACGGGAAAGATGAGGCCAA
TGAAACGCTGGAGAAACTCTTTCAGGCAGGTCAAGGTTGTAGCGAATAAG
AATAAGCCCTTGAGCCTGCTACCGGTAGGTATATTTTTCGATTTTGTTCC
GCCGACAGTCGTCTCAACATGCCCCGCCGAAAATGAGGTCACGCCACGAG
TCGTTGCTGGTGCGGACTATAAGGCGTAATGCAACGATTCAGGCACACCT
AAGACGTACTTTGCGATGGCGGCGTCGAGGAACCAAAGCGAAAGACTCGT
GTTTCAACTGCGCAAGATGGAGTCAAGACTGTTGGCTGGCTGACTTGTAG
CTGTAAGACCCCCGCTTACATACTACCTGGTACCGTAGAAAGTATGGAAA
GAGACAGTCCTCTTATTGTGGCGAGCGACGACCAAGTGCTCGCGCGGACG
TTTCCGTACAATACGCACGGTGCGTCATTACGCACGGTGCGTACGCATCG
CTGAGCAGCGTTCTGGAAATCCGTGACAACGCTGACTAGCTTCCCGCTAC
CTAAGTGCCCTTTCCAGAAAGCATACAAATCCAGGAATTCTTTGGAACCT
GTCTTGCTCGATGTCAGGCAGAGAAGATCAGCCCCAACGACCTGACCATC
TTTGACGAGGAAGTAGTGCCGAACCAGTGGAATCGCCGGGTACACGCCCT
CGAGCGCATCGCCGATAGAGTTCCCGTGACCAACCGCTTCCCGGCGTTCG
CGGAGTTCAGCAACGAAGACAAGCACCGGCACCTCTTTCAGGCGCGTTTT
TCGCACTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig632:19929..24737+

>mRNA_F-serratus_M_contig632.17178.1 ID=mRNA_F-serratus_M_contig632.17178.1|Name=mRNA_F-serratus_M_contig632.17178.1|organism=Fucus serratus male|type=CDS|length=2046bp|location=Sequence derived from alignment at F-serratus_M_contig632:19929..24737+ (Fucus serratus male)
ATGAGGCGAGATCGAGGGACTGGTTTACTCGGCCCAGCAGAACGGTCCGA
GCGACGATACCTCCGCAACTTTGACGACCCCAACGACGATCTCGTCGACG
CCGGCAGCGGTGGTAGAAGCGGGGGTGGAGGGGAGCAGGTCGGCGGCGGT
TTGCGTGGTGAAGATGAGGCGAGATCGAGGGACTGGTTTACTCGGCCCAG
CAGAACGGTCCGAGCGACGATACCTCCGCAACTTTGACGACCCCAACGAC
GATCTCGTCGACGCCGGCAGCGGTGGTAGAAGCGGGGGTGGAGGGGAGCA
GGTCGGCGGCGGTTTGCGTGGTGAAGGCGGAGGAGGCGGGCGGAATCAAG
ACAACATCGGCGCTGACCATGGGATAGGCGGTGAAGATGATGCCGTTGAT
ATTGACCAGACAATCGATCGCTACGACTATCTCGTCGCATTCCCCAATCC
TCCAGAGTTTGGGGCGCGGCGGAGACGTGCAGGAAGCGATGAGGAGGAAA
ATTCGGGCGAGGCGGAGGAGGCGGGCGGAATCAAGACAACATCGGCGCTG
ACCATGGGATAGGCGGTGAAGATGATGCCGTTGATATTGACCAGACAATC
GATCGCTACGACTATCTCGTCGCATTCCCCAATCCTCCAGAGTTTGGGGC
GCGGCGGAGACGTGCAGGAAGCGATGAGGAGGAAAATTCGGGCGAGGGAG
GCGATGGCCATGACAGCCACCCCTGCGAGAGAGATACCAGGCGTATTACG
CTGGCCGAGGGAGGCGATGGCCATGACAGCCACCCCTGCGAGAGAGATAC
CAGGCGTATTACGCTGGCCGAGGTGAACGAAATCTGGTACTCCGCTGTGC
CGGGAGACGAGATCTCCAAAACTACCGCCAAGGAAAGCCTCGCACGGGAG
TTCCAGGCTCGATTTAGGGCCCCAACCAACGACCCCGAAGAGGTGAACGA
AATCTGGTACTCCGCTGTGCCGGGAGACGAGATCTCCAAAACTACCGCCA
AGGAAAGCCTCGCACGGGAGTTCCAGGCTCGATTTAGGGCCCCAACCAAC
GACCCCGAAGAGGTTACGATATCCCGGTCCGAGTGGGTCAGGCTGGCGCG
TGACGTGATTATCAAAACGTTATTCGCTAAGTCGGGGCTCCAGCTGAAGC
TGACGCTGTCTCGGCAAAGGGACCGGGTTACGATATCCCGGTCCGAGTGG
GTCAGGCTGGCGCGTGACGTGATTATCAAAACGTTATTCGCTAAGTCGGG
GCTCCAGCTGAAGCTGACGCTGTCTCGGCAAAGGGACCGGGTGCTCTGCC
GGATCCGTGCTCCGATCATCCTGCTGGAGAGAGAAGCAGCGCGAGAAAAA
TATCGGCTTCAGTTTCGCGGGGAGGTGCTCTGCCGGATCCGTGCTCCGAT
CATCCTGCTGGAGAGAGAAGCAGCGCGAGAAAAATATCGGCTTCAGTTTC
GCGGGGAGGTGGATCCCGGAAATGATTTTTGGACGGAAGATGAGATCGCC
GAAGAGCAGAGTTTATACGGGAAAGATGAGGCCAATGAAACGCTGGAGAA
ACTCTTTCAGGCAGGTGGATCCCGGAAATGATTTTTGGACGGAAGATGAG
ATCGCCGAAGAGCAGAGTTTATACGGGAAAGATGAGGCCAATGAAACGCT
GGAGAAACTCTTTCAGGCAGAGAAGATCAGCCCCAACGACCTGACCATCT
TTGACGAGGAAGTAGTGCCGAACCAGTGGAATCGCCGGGTACACGCCCTC
GAGCGCATCGCCGATAGAGTTCCCGTGACCAACCGCTTCCCGGCGTTCGC
GGAGTTCAGCAACGAAGACAAGCACCGGCACCTCTTTCAGGCGCGTTTTT
CGCACTGAAGAAGATCAGCCCCAACGACCTGACCATCTTTGACGAGGAAG
TAGTGCCGAACCAGTGGAATCGCCGGGTACACGCCCTCGAGCGCATCGCC
GATAGAGTTCCCGTGACCAACCGCTTCCCGGCGTTCGCGGAGTTCAGCAA
CGAAGACAAGCACCGGCACCTCTTTCAGGCGCGTTTTTCGCACTGA
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