mRNA_F-serratus_M_contig630.17152.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: A0A6H5J904_9PHAE (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J904_9PHAE) HSP 1 Score: 201 bits (511), Expect = 9.790e-59 Identity = 99/158 (62.66%), Postives = 125/158 (79.11%), Query Frame = 3
Query: 246 RAVWVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVLSREPEVIAAT--TAVKE 713
RA W++E VSLE+PA + AY++Y+DL RQPEWSPWLK++++DR TSKWV+Q NGI++SW+A +T+EV G EV W STTGL NRGRVTF+D RCLMTLTLSY+LP+V+A VLRLE VER V+RT+LSDL RF VL R+ E + A+ TA KE
Sbjct: 70 RAAWIDEQVSLEVPASTQDAYSLYSDLQRQPEWSPWLKSVQHDRATGTSKWVIQSNGIKVSWNAQNTVEVYGSEVAWESTTGLSNRGRVTFDDKGDGRCLMTLTLSYNLPYVIASVLRLEAVERFVKRTILSDLARFKKVLVRQLETVPASPSTAPKE 227
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: D8LS08_ECTSI (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS08_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.100e-44 Identity = 71/110 (64.55%), Postives = 90/110 (81.82%), Query Frame = 3
Query: 246 RAVWVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLP 575
RA W++E VSLE+PA + AY++Y+DL RQPEWSPWLK++++DR TSKWV+Q NGI++SW+A +T+EV G EV W STTGL NRGRVTF+D RCLMTLTLSY+LP
Sbjct: 54 RAAWIDEQVSLEVPASTQDAYSLYSDLQRQPEWSPWLKSVQHDRATGTSKWVIQSNGIKVSWNAQNTVEVYGSEVAWESTTGLSNRGRVTFDDKGGERCLMTLTLSYNLP 163
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: A0A7S1EQM7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQM7_9RHOD) HSP 1 Score: 110 bits (274), Expect = 2.510e-25 Identity = 56/143 (39.16%), Postives = 86/143 (60.14%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQT-SKWVVQQNGIRISWSAVST-LEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVLSRE 677
W+E ++I AP E + Y+DL P+WSPWL+++E D +T SKW + GI +SW A +T + P + + W S GL NRG+V F + + + L++++ +P LA ++ + V VQ+TLLSDLERF +L RE
Sbjct: 57 WIENVAEVQIQAPAEEVFLTYSDLEAMPKWSPWLRSVEVDPSDETISKWSLAARGISVSWKARNTEVRSPDI-IAWESIDGLPNRGKVLFSPIKENHTKVQLSVAFQVPSFLASIMENDFVSTFVQKTLLSDLERFRTILLRE 198
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: A0A7S2V400_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V400_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.800e-23 Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 3
Query: 303 AYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSR----CLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVLSRE 677
+YN+Y+ L + P WSPWL +++ K+ S W + G+ +SW AV+T+E PG +Q S TG+ N+G+VTF + C + LT+SYD+P V+AK+ + V R + TL+ DL+RF L++E
Sbjct: 3 SYNLYSQLEKHPTWSPWLDSVKMVDSKE-SVWTLSSKGVTLSWRAVNTVEEPGKCIQXESITGVPNKGKVTFTPVKRPEGTEWCQIELTVSYDIPGVVAKISQAAFVSRFTEETLMGDLKRFKTTLAKE 130
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: A0A5J6Q7H5_9SYNE (SRPBCC family protein n=1 Tax=Synechococcus sp. RSCCF101 TaxID=2511069 RepID=A0A5J6Q7H5_9SYNE) HSP 1 Score: 97.8 bits (242), Expect = 2.580e-21 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVLSR 674
W+E TV+ E+ AP E + V++DL P W W++++ + ++W + G R SW A + V +QW S GL RG V F P R + LT+SY+LP +LA ++ + + IV R L ++L RF D++ R
Sbjct: 4 WLEHTVTTEVQAPLEQVWAVWSDLEAMPRWMRWIESVTTLEDPDLTEWHLAAQGFRFSWKARISDRVEAQRLQWHSVGGLPTRGAVRFYSMTPQRTAVKLTVSYELPGILAPLMEPKALGGIVNRELQANLNRFRDLVER 143
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: A0A2D6Y4W2_9SYNE (Polyketide_cyc domain-containing protein n=1 Tax=Synechococcus sp. ARS1019 TaxID=2024878 RepID=A0A2D6Y4W2_9SYNE) HSP 1 Score: 95.5 bits (236), Expect = 1.630e-20 Identity = 45/138 (32.61%), Postives = 80/138 (57.97%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVL 668
W+E TV+ E+ AP + + V+ DL P+W W+++++ + ++W + G R +W A T V ++ W S GL +G V F P+R ++ LT+SY+LP VLA ++ ++ IV + L ++L+RF D++
Sbjct: 4 WLEHTVTSEVQAPADKVWAVWXDLEAMPKWMRWIESVKTMDDPDLTEWTLAAQGFRFTWKAHITQRVEAQQLHWQSVGGLPTKGAVRFYPETPNRTVVKLTVSYELPGVLAPLMDPSILGGIVVKELQANLDRFRDLV 141
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: K9Q0G5_9CYAN (Cyclase/dehydrase n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9Q0G5_9CYAN) HSP 1 Score: 95.5 bits (236), Expect = 2.010e-20 Identity = 46/141 (32.62%), Postives = 83/141 (58.87%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEY-DREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVLSR 674
W+E +V +E+ AP E + +++DL + P+W W++++E D + S+W + W + + VP +QW S GL NRG V F D + S ++ L+++YD+P VL +V+ + ++V+ T+ +DLERF + L +
Sbjct: 4 WLEHSVQIEVNAPIETVWGLWSDLEQMPKWMKWIESVEILDENSELSRWKLASGSFEFKWLSKTLKVVPNQIIQWESIDGLPNRGAVRFYDRKASS-IVRLSIAYDIPGVLGQVMDNLFLGKVVESTIQADLERFREYLEQ 143
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: Q0I716_SYNS3 (Oligoketide cyclase/lipid transport protein homolog n=11 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q0I716_SYNS3) HSP 1 Score: 95.9 bits (237), Expect = 2.070e-20 Identity = 44/146 (30.14%), Postives = 81/146 (55.48%), Query Frame = 3
Query: 231 RRPQPRAVWVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTDVL 668
R P+P W++ TV+ ++ AP + + V++DL P W W+++++ + + W + G R W A T + ++QW S GL +G V F +P + L++SY+LP VLA ++ ++ IV + L ++L+RF D++
Sbjct: 12 RWPEPMGRWLDHTVTTQVQAPVDQVWTVWSDLEAMPRWMRWIESVKTREDPDLTDWTLAAQGFRFQWKARMTSRIDQQQLQWESVGGLPTKGAVRFYQEQPEITAVKLSVSYELPGVLAPLMEPTILGGIVTKELQANLDRFRDLV 157
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: K9XSU1_STAC7 (Cyclase/dehydrase n=2 Tax=Stanieria TaxID=102115 RepID=K9XSU1_STAC7) HSP 1 Score: 94.7 bits (234), Expect = 3.250e-20 Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEYDREK-QTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERF 656
W+E TV +E+ P E + +++DL + P W W+ ++E + + S+W + G +W + VPG +QW S GL NRG V F D S ++ LT++Y +P +L K++ + RIV+ TL++D+ERF
Sbjct: 4 WLEHTVQIEVDVPIETVWGLWSDLEQMPRWMKWIDSVEVLADNPELSRWKLASGGFNFTWLSRIVKLVPGQIIQWESVDGLPNRGAVRFYDRHGSS-IVKLTVAYGIPGILGKIMDNLFLGRIVESTLMADMERF 137
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Match: B1WU64_CROS5 (Putative involved in polyketide (Linear poly-beta-ketones) synthesis n=1 Tax=Crocosphaera subtropica (strain ATCC 51142 / BH68) TaxID=43989 RepID=B1WU64_CROS5) HSP 1 Score: 94.7 bits (234), Expect = 3.430e-20 Identity = 45/137 (32.85%), Postives = 83/137 (60.58%), Query Frame = 3
Query: 255 WVEETVSLEIPAPREAAYNVYTDLVRQPEWSPWLKTIEY-DREKQTSKWVVQQNGIRISWSAVSTLEVPGVEVQWMSTTGLKNRGRVTFEDTEPSRCLMTLTLSYDLPFVLAKVLRLEVVERIVQRTLLSDLERFTD 662
W+E +V +E+ AP E +++++DL + P+W W+ +++ D + + S+W + G +W + +P +QW S GL NRG + F D + S ++ L+++YD+P L K++ + RIV+ T+++DLERF D
Sbjct: 4 WLEHSVQIEVDAPIELVWSLWSDLEQMPQWMKWIDSVKVLDEDPELSRWKLASGGFEFTWLSRILKVIPHQIIQWESVDGLPNRGAIRFYDRQGSS-IVRLSVAYDIPGWLGKLMDNLFLGRIVESTIMADLERFRD 139 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig630.17152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig630.17152.1 >prot_F-serratus_M_contig630.17152.1 ID=prot_F-serratus_M_contig630.17152.1|Name=mRNA_F-serratus_M_contig630.17152.1|organism=Fucus serratus male|type=polypeptide|length=298bp MCATRPALATAAHITTIAFAIAFGEIDSRSLYPAFIAHNKSVSLRGKTFSback to top mRNA from alignment at F-serratus_M_contig630:85599..89763+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig630.17152.1 ID=mRNA_F-serratus_M_contig630.17152.1|Name=mRNA_F-serratus_M_contig630.17152.1|organism=Fucus serratus male|type=mRNA|length=4165bp|location=Sequence derived from alignment at F-serratus_M_contig630:85599..89763+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig630:85599..89763+ >mRNA_F-serratus_M_contig630.17152.1 ID=mRNA_F-serratus_M_contig630.17152.1|Name=mRNA_F-serratus_M_contig630.17152.1|organism=Fucus serratus male|type=CDS|length=1788bp|location=Sequence derived from alignment at F-serratus_M_contig630:85599..89763+ (Fucus serratus male)back to top |