mRNA_F-serratus_M_contig6295.17137.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6295.17137.1
Unique NamemRNA_F-serratus_M_contig6295.17137.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 3.240e-108
Identity = 160/275 (58.18%), Postives = 200/275 (72.73%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKI-SKSSQMKPLTECLDFYLEKR-RKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK---VTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESK-VENRDINDHTSDTITYWACATREILYRIVNRLDLETG 807
            +VA+C+R+KDF RFLPEWIAFHYALGVDE+ ++DDDS D T + L+PF++AG+V+Y  E I  + +QMKPL  CL+  LE+R R D  A  W+LFHDTDEYL+P DT+L I +AL  H+ TCC  V RVQYGS    E PRGL+LENFL H+ P     N + KVMVNLDP+EPE GVV+P L SMHNA GC+C   K   V+++RINHYLGS+GD+ D + RYWE   K     +K V  RDIN++ SD I +WACATRE+L+RIV  LDLE G
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGG 276          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 6.650e-107
Identity = 161/275 (58.55%), Postives = 201/275 (73.09%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKI-SKSSQMKPLTECLDFYLEKR-RKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK---VTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESK-VENRDINDHTSDTITYWACATREILYRIVNRLDLETG 807
            +VA+C+R+KDF RFLPEWIAFHYALGVDE+ ++DDDS D T + L PF++AG+V+Y  E I  + +QMKPL  CL+ +LE+R R D  A  W+LFHDTDEYL+P DT+L I +AL  H+ TCC  V RVQYGS    E PRGL+LENFL H+ P     N +PKVMVNLDP+EPE GVV+P L SMHNA GC+C   K   V+ +RINHYLGS+GD+ D + RYWE   +     +K V +RDIND+ SD I +WACATRE+L+RIV  LDLE G
Sbjct:  214 RVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKG 488          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.760e-97
Identity = 145/271 (53.51%), Postives = 190/271 (70.11%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISK-SSQMKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYLGSLGDFYDHSRRYWEIYLKKRPTESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGL 810
            +VA CVR+KDFGRFLPEWIA+HYA+GVDE+ ++DDDS D TV+ L PF+ AG+V Y LE+     +QM PL  CL+ ++ +R  D  APRW+LFHDTDEY+ PVDT++TI +AL  H++TCCV+V RV YG+G   E P+GL+LE FL HA   + ++NR+PKV VNLD T+P  G    +L SMHN  GC+C+   V E+RINHYLGS GD+   ++RYW+    +   E  +  RDIN   SDTIT WACATRE+L  ++   DL   L
Sbjct:  137 KVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVL 407          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 2.790e-96
Identity = 142/273 (52.01%), Postives = 195/273 (71.43%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISK-SSQMKPLTECLDFYLEKRRKDPR-APRWILFHDTDEYLFPVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYLGSLGDFYDHSRRYWEIYLK-KRPTESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGL 810
            +VA+C+R+KD+GRFLPEW+AFHYA+GVDEV ++DD+SVD+T + L PF+ AG+V+Y  + I + ++QM+PL  CL  Y+ +++ DP  AP W+LFHD DEY++P DT++T+ +AL  H STCC  V R+QYGSG   E PRGLV+++F+ H +  +  AN  PKV+VNL PTE +   V P L SMH A GC C   K  E+ INHYLGS GD+ +   RYW  Y+        ++  RD+ND  SDTIT+W+C+TRE+LYR+ N LDL+TGL
Sbjct:  175 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHAN--PKVVVNLTPTESDP--VAPPLKSMHKAEGCACLDLKQ-EVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGL 442          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 7.740e-44
Identity = 86/181 (47.51%), Postives = 120/181 (66.30%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQA----LFPFMQAGVVKYKLEKISK--------SSQMKPLTECLDFYLEKRRKDPR-APRWILFHDTDEYLFPVDTN-LTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNL 501
            QV  C R+KD GR+LPEW+A+H+A+GVDE+ +FDDDSVD T +A    L PF++AG+VK++   I          S+ M PLTEC++ Y        R APRW++  DTDEYL+  +   + +PEAL + ++TCC+QV  VQ+G+    ++PRGL+LENFLTHADP +   N  PKV+  L
Sbjct:  250 QVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVLYCL 430          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D8LG83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG83_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.580e-26
Identity = 73/222 (32.88%), Postives = 107/222 (48.20%), Query Frame = 1
Query:  250 DPRAPRWILFHDTDEYLFPVDTN-LTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPWNARANRIPKVMVNL----DPTEPEKGVVDPKLPSMHNA--------------HGCECEKPKVTEMRINHYLGSLGDFYDHSRRY-----WEIYLKKRPT-------ESKVENRDINDHTSDTITYWACATREILYRIVNRLDLETGLDKTS 822
            D  APRW++  DTDE+L+  +   + +PEAL S ++TCC+QV  VQ+G+    ++PRGL+LENFLTHADP +   N  PKV++        T  E    D   P   ++               GC CE+  V +  +  Y  +  D     RRY     W+   ++R         +  +E   +NDH SD +  W+C  R +L R  N   L TG  + S
Sbjct:    6 DRLAPRWVVLLDTDEFLWAREAGEIGLPEALESRSTTCCLQVSTVQHGTSGFPKSPRGLLLENFLTHADPTSPELNGPPKVILRFRDDASGTASESSGEDVNPPVSVSSFLGDGDGGGVTEMREGCRCEEAGVGDFAVRRYPMTREDVAARGRRYSTVLQWQQQQQRRAMTREAVEFDESLETAALNDHKSDAMVEWSCVVRRLLDRAANGKHLVTGRPQAS 227          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: D8LG84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG84_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 8.330e-11
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRT 123
            QV  C R+KD GR+LPEW+A+H+A+GVDE+ +FDDDSVD T
Sbjct:   64 QVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDT 104          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: UPI0018C63F15 (glycosyltransferase family 2 protein n=3 Tax=Cupidesulfovibrio TaxID=2802295 RepID=UPI0018C63F15)

HSP 1 Score: 65.9 bits (159), Expect = 1.320e-8
Identity = 71/269 (26.39%), Postives = 112/269 (41.64%), Query Frame = 1
Query:    7 AMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVK-YKLEKISKSSQMKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLF---PVDTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENF---LTHADPWNARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPK-VTE---------MRINHYLGSLGDFYDHSRRYWEIYLKKRPTESKVENRDINDHTSDTITYWACATR 762
            A+C   KD    LPE++A+H+A+G ++   +D++S     + L  ++  G+V  Y++  + KS QM   T+C+  Y  K        RWI F D DE+L      D  L + E    + +   + V  V +GS   +  P GLVL+++    T  +P N     I      + P   E    DP        HGC  E    VT          +++NHYL      Y+   R             + +N + +D       +W  ATR
Sbjct:    8 AICAIVKDEHLSLPEFVAYHHAIGFEKFIFYDNESTIPVRETLQEYVTRGIVDVYRV--VGKSMQMPCYTQCIQDYRGK-------VRWIAFIDADEFLILKHHADARLLLFE----YEAHAGLAVHWVTHGSAGHLGRPGGLVLDDYPEYFTDNEPDNLHVKSI------VQPARTECAR-DPHQFFFAPGHGCVDEHGSPVTSAFAPFTADIVQLNHYLFKSQQDYEAKMR-----------RGRADNHEFSD-LRKLEGFWRQATR 244          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A2T4WK05_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WK05_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-6
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 1
Query:    1 QVAMCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISKSSQMKPLTECLDFYLEKRRKDPRAPR-------WILFHDTDEYLFPV 309
            ++A+    K+   FL EW+ FH+A GVD ++L +D+S D     L P+ Q G+++++       S   P     DFY+ +     +A R       WI F D+DEY+FP+
Sbjct:   40 KLALHAMFKNEADFLKEWLDFHFAHGVDFIRLTNDNSDDNFAAVLEPYRQMGILEWE------DSIAHP-----DFYVREEFHKNKALRDLGKDYQWIAFIDSDEYIFPL 138          
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Match: A0A376Y598_ECOLX (Glycosyltransferase family 2 protein n=10 Tax=Enterobacterales TaxID=91347 RepID=A0A376Y598_ECOLX)

HSP 1 Score: 58.9 bits (141), Expect = 2.690e-6
Identity = 60/214 (28.04%), Postives = 98/214 (45.79%), Query Frame = 1
Query:   40 FLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGVVKYKLEKISKSSQ--MKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLFPVD----TNLTIP----EALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHA---DPWNARANRIPKV--MVNLDPT------EPEKGVVDPKLPSMHNAHGCECEKPKVTEMRINHYL 618
            F+ EWIA+H ALG++++ + D+ S D + + L+   +A ++K    +I   +Q  + P     +  L    KD    RW+ F D DE++ P D     N  +P    +A+G+ +    V      YGS + I    GLV+E F+  A    P N     I +V  ++   PT        +K  V P     H+  G   E    + +R+NHY+
Sbjct:   14 FIVEWIAYHMALGINDIYIADNISSDGSSELLYFLDKANIIK----RIDYPTQDGIPPQLGAYNKILSMLDKD----RWVAFIDADEFISPNDYEDGLNKLMPLLNDQAIGAISLNWAV------YGSSHSILPDDGLVIERFVKRAADLHPVNRHYKSIVRVSDVIKAGPTPHAFIINSDKKFVMPSGEEHHSYDGIS-EVIDWSVIRLNHYV 212          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6295.17137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FYE9_ECTSI3.240e-10858.18Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KB75_9PHAE6.650e-10758.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFX9_9PHAE1.760e-9753.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLX6_ECTSI2.790e-9652.01Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JE36_9PHAE7.740e-4447.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG83_ECTSI3.580e-2632.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG84_ECTSI8.330e-1165.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0018C63F151.320e-826.39glycosyltransferase family 2 protein n=3 Tax=Cupid... [more]
A0A2T4WK05_9BACT1.470e-632.73Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
A0A376Y598_ECOLX2.690e-628.04Glycosyltransferase family 2 protein n=10 Tax=Ente... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6295contigF-serratus_M_contig6295:14393..16476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score85.9
Seed ortholog evalue3.2e-14
Seed eggNOG ortholog515622.bpr_I2417
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyltransferase family 92
EggNOG OGs1VCNF@1239,252FN@186801,COG0463@1,COG0463@2
COG Functional cat.M
Best tax levelClostridia
Best eggNOG OGNA|NA|NA
Exons5
Model size828
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6295.17137.1prot_F-serratus_M_contig6295.17137.1Fucus serratus malepolypeptideF-serratus_M_contig6295 14402..16476 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931942.8714736-UTR-F-serratus_M_contig6295:14392..144011622931942.8714736-UTR-F-serratus_M_contig6295:14392..14401Fucus serratus maleUTRF-serratus_M_contig6295 14393..14401 +
1690964068.6021829-UTR-F-serratus_M_contig6295:14392..144011690964068.6021829-UTR-F-serratus_M_contig6295:14392..14401Fucus serratus maleUTRF-serratus_M_contig6295 14393..14401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931942.9026835-CDS-F-serratus_M_contig6295:14401..145801622931942.9026835-CDS-F-serratus_M_contig6295:14401..14580Fucus serratus maleCDSF-serratus_M_contig6295 14402..14580 +
1690964068.6237988-CDS-F-serratus_M_contig6295:14401..145801690964068.6237988-CDS-F-serratus_M_contig6295:14401..14580Fucus serratus maleCDSF-serratus_M_contig6295 14402..14580 +
1622931942.9238164-CDS-F-serratus_M_contig6295:14863..150441622931942.9238164-CDS-F-serratus_M_contig6295:14863..15044Fucus serratus maleCDSF-serratus_M_contig6295 14864..15044 +
1690964068.6344278-CDS-F-serratus_M_contig6295:14863..150441690964068.6344278-CDS-F-serratus_M_contig6295:14863..15044Fucus serratus maleCDSF-serratus_M_contig6295 14864..15044 +
1622931942.9459672-CDS-F-serratus_M_contig6295:15471..155881622931942.9459672-CDS-F-serratus_M_contig6295:15471..15588Fucus serratus maleCDSF-serratus_M_contig6295 15472..15588 +
1690964068.644602-CDS-F-serratus_M_contig6295:15471..155881690964068.644602-CDS-F-serratus_M_contig6295:15471..15588Fucus serratus maleCDSF-serratus_M_contig6295 15472..15588 +
1622931942.966927-CDS-F-serratus_M_contig6295:15902..160791622931942.966927-CDS-F-serratus_M_contig6295:15902..16079Fucus serratus maleCDSF-serratus_M_contig6295 15903..16079 +
1690964068.6552546-CDS-F-serratus_M_contig6295:15902..160791690964068.6552546-CDS-F-serratus_M_contig6295:15902..16079Fucus serratus maleCDSF-serratus_M_contig6295 15903..16079 +
1622931942.9859083-CDS-F-serratus_M_contig6295:16311..164761622931942.9859083-CDS-F-serratus_M_contig6295:16311..16476Fucus serratus maleCDSF-serratus_M_contig6295 16312..16476 +
1690964068.6657906-CDS-F-serratus_M_contig6295:16311..164761690964068.6657906-CDS-F-serratus_M_contig6295:16311..16476Fucus serratus maleCDSF-serratus_M_contig6295 16312..16476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6295.17137.1

>prot_F-serratus_M_contig6295.17137.1 ID=prot_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MCVRSKDFGRFLPEWIAFHYALGVDEVKLFDDDSVDRTVQALFPFMQAGV
VKYKLEKISKSSQMKPLTECLDFYLEKRRKDPRAPRWILFHDTDEYLFPV
DTNLTIPEALGSHNSTCCVQVMRVQYGSGNRIETPRGLVLENFLTHADPW
NARANRIPKVMVNLDPTEPEKGVVDPKLPSMHNAHGCECEKPKVTEMRIN
HYLGSLGDFYDHSRRYWEIYLKKRPTESKVENRDINDHTSDTITYWACAT
REILYRIVNRLDLETGLDKTST*
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mRNA from alignment at F-serratus_M_contig6295:14393..16476+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6295.17137.1 ID=mRNA_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=mRNA|length=2084bp|location=Sequence derived from alignment at F-serratus_M_contig6295:14393..16476+ (Fucus serratus male)
CAGGTGGCGATGTGTGTTCGCAGCAAGGACTTTGGCCGTTTCCTGCCCGA ATGGATAGCTTTTCATTACGCCCTAGGGGTGGATGAGGTCAAGCTCTTCG ACGACGATAGTGTGGACAGGACAGTACAGGCTCTTTTCCCCTTTATGCAG GCTGGAGTCGTGAAGTACAAGCTCGAAAAGATCTCCAAGTAAGACCATAA AGGACACCATCTTGCTGGACACGTGTCCCAAAACTACTACTGGCGAAATT TATGACCGACTGTATCATTATAAAGAAAATTCGTGATGTCGCTGAGAGAC ACAGTGTCAAAAGCACAGCTGTAAGGTAACTGAAAGTAGTTCAATTGCAG CCTTGCAAAATAAAATACCCGTGTGCCAGGACTGAATTTGGCTTTCGGGA GCTTTCCGAATGCCACTGAAATTGGGTCTTGCTTTATGTTTATCACCGCT CCCCCGTCCGTCGTTGTGCAGGTCTTCACAAATGAAGCCGCTGACTGAGT GCCTCGATTTTTATTTGGAAAAAAGAAGGAAAGATCCACGCGCTCCGAGA TGGATCCTTTTCCACGACACTGACGAGTACCTTTTCCCCGTCGATACCAA CCTCACCATCCCTGAGGCATTGGGCAGCCACAACTCCACGTGCTGTGTGC AGGTATTCTTACGTCGAAATGTATTCACAATGAAAGCCCTCGACGTAGCC CATCAGATCCTACTTTTTTTTCCAGGCCTAACGAGTTGTACGGCAGCGCC TAGTGTCATGCCAGGGCCGCTGGGTACGGAGTCATCTCTTGCTCGATAAG GCTGGCTTCCGCAGTATGTAGAACAGCAAAAGGTTGTAGATACCCGATAT TGCCGTGGCCAGAATCGATAGATTGCGTCCGGGATCTGTGGACAAAACGT TTTGACAGTGGCAAACTAAACTGGCAGTGTTTTGGTTCTGTGGAGACGGC AACCGTCAGGGTACACTCGGGGCCTGATGCGGCCAAAAACCCCTCTTCTT GCCTGCACGGTCCCCGGCCTTGTAATTTCGGGGGTCATCTCACAACTCCC AAAACCTTTGGACTATGGTTGCGTTTCAGGTAATGCGCGTTCAGTACGGC AGCGGGAACCGGATCGAAACTCCCCGTGGGCTTGTGCTGGAAAATTTCCT AACCCACGCGGATCCCTGGAACGCGCGCGCAAATCGCATACCTAAAGTGA GCGCTATGCAATCGGAATTTGCTTTTTTTGGGGGAGTCTGTGCAATACAT GCAGTGTACGCGGCGAAAGTACGAGACGGTTGATTTCTAGATTTTGCCGA TAAAGGTCTACTGTCCGTGCCATGTCGCCGAAACGAGTACTTGGTTCCTT CATGAAGCTTTTGAGTTTTACGCAGTACGCAGAAAGCTCTACTCCGCGGC GTACCTTCTTGCGTAGCCTCGAGGAGTTCATAACTTCCATAAAGCATTAT GCGACACAAACGCCCCTAGATAACTATAATATGCACGTTCGAACCTACCC TACCATGCAGGTCATGGTTAACTTGGACCCTACAGAACCCGAGAAAGGTG TCGTCGACCCCAAGTTGCCAAGCATGCATAACGCGCATGGCTGTGAATGT GAGAAACCGAAAGTGACCGAAATGCGAATCAATCACTACTTGGGGAGTCT TGGCGACTTCTATGACCACTCGAGGCGATATTGGGAGGTGAGCCTCATCT ACCACGGAAGGGTCAAGCGTGCCATAGCCTGCAAGAACTAGACCTCCAAC GTGGCTCTGCCTCGCGGATTTCTCAAACACGCCCCCCCCTCCCCGCGACG TAAAGCAGGCAACCCAGTCCTTAAGTCGGCGCAAATATTTCTGGTTTTAT GCACAACACTATGTTATTGTCTTTGTGTATGCCCCCCGTTGTTTGATATC CCTCGCCTTCACTCGTCAGATTTACTTGAAAAAACGACCGACGGAGAGCA AAGTTGAGAATAGAGACATCAACGACCACACGTCGGACACCATCACGTAC TGGGCGTGCGCGACGAGAGAGATCCTCTACAGAATAGTAAACCGTCTGGA CTTGGAAACTGGGCTAGATAAAACAAGTACTTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig6295:14393..16476+

>mRNA_F-serratus_M_contig6295.17137.1 ID=mRNA_F-serratus_M_contig6295.17137.1|Name=mRNA_F-serratus_M_contig6295.17137.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig6295:14393..16476+ (Fucus serratus male)
ATGTGTGTTCGCAGCAAGGACTTTGGCCGTTTCCTGCCCGAATGGATAGC
TTTTCATTACGCCCTAGGGGTGGATGAGGTCAAGCTCTTCGACGACGATA
GTGTGGACAGGACAGTACAGGCTCTTTTCCCCTTTATGCAGGCTGGAGTC
GTGAAGTACAAGCTCGAAAAGATCTCCAAATGTGTGTTCGCAGCAAGGAC
TTTGGCCGTTTCCTGCCCGAATGGATAGCTTTTCATTACGCCCTAGGGGT
GGATGAGGTCAAGCTCTTCGACGACGATAGTGTGGACAGGACAGTACAGG
CTCTTTTCCCCTTTATGCAGGCTGGAGTCGTGAAGTACAAGCTCGAAAAG
ATCTCCAAGTCTTCACAAATGAAGCCGCTGACTGAGTGCCTCGATTTTTA
TTTGGAAAAAAGAAGGAAAGATCCACGCGCTCCGAGATGGATCCTTTTCC
ACGACACTGACGAGTACCTTTTCCCCGTCGATACCAACCTCACCATCCCT
GAGGCATTGGGCAGCCACAACTCCACGTGCTGTGTGCAGGTCTTCACAAA
TGAAGCCGCTGACTGAGTGCCTCGATTTTTATTTGGAAAAAAGAAGGAAA
GATCCACGCGCTCCGAGATGGATCCTTTTCCACGACACTGACGAGTACCT
TTTCCCCGTCGATACCAACCTCACCATCCCTGAGGCATTGGGCAGCCACA
ACTCCACGTGCTGTGTGCAGGTAATGCGCGTTCAGTACGGCAGCGGGAAC
CGGATCGAAACTCCCCGTGGGCTTGTGCTGGAAAATTTCCTAACCCACGC
GGATCCCTGGAACGCGCGCGCAAATCGCATACCTAAAGTAATGCGCGTTC
AGTACGGCAGCGGGAACCGGATCGAAACTCCCCGTGGGCTTGTGCTGGAA
AATTTCCTAACCCACGCGGATCCCTGGAACGCGCGCGCAAATCGCATACC
TAAAGTCATGGTTAACTTGGACCCTACAGAACCCGAGAAAGGTGTCGTCG
ACCCCAAGTTGCCAAGCATGCATAACGCGCATGGCTGTGAATGTGAGAAA
CCGAAAGTGACCGAAATGCGAATCAATCACTACTTGGGGAGTCTTGGCGA
CTTCTATGACCACTCGAGGCGATATTGGGAGGTCATGGTTAACTTGGACC
CTACAGAACCCGAGAAAGGTGTCGTCGACCCCAAGTTGCCAAGCATGCAT
AACGCGCATGGCTGTGAATGTGAGAAACCGAAAGTGACCGAAATGCGAAT
CAATCACTACTTGGGGAGTCTTGGCGACTTCTATGACCACTCGAGGCGAT
ATTGGGAGATTTACTTGAAAAAACGACCGACGGAGAGCAAAGTTGAGAAT
AGAGACATCAACGACCACACGTCGGACACCATCACGTACTGGGCGTGCGC
GACGAGAGAGATCCTCTACAGAATAGTAAACCGTCTGGACTTGGAAACTG
GGCTAGATAAAACAAGTACTTGAATTTACTTGAAAAAACGACCGACGGAG
AGCAAAGTTGAGAATAGAGACATCAACGACCACACGTCGGACACCATCAC
GTACTGGGCGTGCGCGACGAGAGAGATCCTCTACAGAATAGTAAACCGTC
TGGACTTGGAAACTGGGCTAGATAAAACAAGTACTTGA
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