mRNA_F-serratus_M_contig628.17121.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: D7FTX7_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX7_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.030e-35 Identity = 92/206 (44.66%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 1 PELDAWINHSATYRYWVDNMSTVGGHPNDPSDMRPLLIDIWRHAKLQAWKDFLGEGLLGAASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLLS-DARQAPLP-LEPSCARQV-------WQSSKGDHILVISSISLVQKSKASPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAA 591
PELDAWI+HS W +R ++ + ++ + + W FLG GLL AAS+GNL G +QL+ GA L +D +G TPLHRA+ AGHAGV LL S D R PL PS + V WQ+S +LV S+SLV+++ RD SGS P+HLAA GHA VV++LLQ+GA+ NG Q+PLH AAA
Sbjct: 31 PELDAWIDHST----WPG--------------LRSIVTEAYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLHARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSSGMVPEPPSLKWQASMEGPVLV-PSVSLVKRTTLDARDHSGSCPIHLAAACGHADVVQVLLQHGADVSGSNGVAQSPLHTAAA 217
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A7S1G430_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G430_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.390e-7 Identity = 86/254 (33.86%), Postives = 116/254 (45.67%), Query Frame = 1
Query: 169 LLGAASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLLS------DARQAPLPLEPSCARQVWQSSKGDHILVISSISLVQK-----SKASPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQ-QTPLHLAAARSFGTAADIIRXXXXXXXXXXXXXXXXXXXXXXXASADGTEEAISALRRAGADPHVVGSIGGSTPLHEACARL-RPKNVQRLLDLDADEERLDADGQTAGD 891
+L AA G+ ++ + GA+ DG PLH A G+A VV LL S DA +A P + + GD L +S + + + + D SG+SPLH+AA+RG A V +L+ A+P + QTPLH A S XXXXXXXXX ADG+ E +S L AGAD +G TPLH CA + + + RLL L AD +D G TA +
Sbjct: 45 VLDAARRGDAGAVRKALRGGADPNEHLLDGWRPLHYACDIGNAAVVHELLASRAPVHVDAAEAGAGATPLL---LAVDAFGDVDLRAASTRIAEMLVRAGADVNKTDDSGTSPLHVAAKRGAADTVRMLIGAYAKPSPVKTSTGQTPLHQACLGS----------------------GXXXXXXXXXGVADGSAEVVSVLAGAGADVDCQDLLG-HTPLH-CCAMMDKSEAAVRLLSLGADASIVDFQGLTAAE 271
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A3P7JKD2_STRVU (Uncharacterized protein (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7JKD2_STRVU) HSP 1 Score: 61.6 bits (148), Expect = 8.850e-7 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLL--SDARQAPLPLEPSCARQVWQSSKGDHILVISSISLVQKSKA--SPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAARSF 600
AA NG L ++ L+ GAN +D G+TPLH AA+ + VV + L + R ++ + ++ + V+ + ++ K+ + + ++ LH+AA GHA +V++LL+NGA D N T LHL A F
Sbjct: 73 AARNGQLVVSQTLLALGANPNARDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRGVLTAIDHNGFTCAHIAAMKGSLAVVKELMMIDKAMVIQAKTKTMEATTLHMAAAGGHANIVQILLENGANAEDENAHGMTALHLGAKNGF 217
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A183BNJ7_GLOPA (ANK_REP_REGION domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BNJ7_GLOPA) HSP 1 Score: 61.2 bits (147), Expect = 2.380e-6 Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLL-LSDARQAPLPLEP----SCARQVWQSSKGDHILVISSISLVQKSKA--SPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAA 588
AA G L A+ L+ GAN +D G+TPLH AA+ VV + L + A L +CA + KG + V+ + ++ K+ + S ++ LH+AA GHA +V++LL+NGA P D N TPL LAA
Sbjct: 1015 AAKYGQLVVAQTLLALGANPNARDDKGQTPLHLAAENDFPDVVKLFLKMKQNNHAVLTAVDHSGFTCAHIA--AMKGS-LAVVKELMMIDKAMVIHAKTKSLEATTLHMAAGGGHAKIVKILLENGANPEDENANGMTPLSLAA 1155
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A368FS70_ANCCA (Ankyrin repeat protein n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368FS70_ANCCA) HSP 1 Score: 60.1 bits (144), Expect = 3.480e-6 Identity = 43/143 (30.07%), Postives = 71/143 (49.65%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLL--SDARQAPLPLEPSCARQVWQSSKGDHILVISSISLVQKSKASPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAARSF 600
+A +G L ++ L+ GAN +D G+TPLH AA+ + VV + L + R ++ + ++ + V+ + ++ K+ A+ LH+AA GHA +V++LL+NGA D N T LHL A F
Sbjct: 165 SARHGQLVVSQTLLALGANPNARDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRGVLTAIDHNGFTCAHIAAMKGSLAVVKELMMIDKAMATT--------LHMAAAGGHANIVKILLENGANAEDENAHGMTALHLGAKNGF 299
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: UPI0016019CB3 (transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016019CB3) HSP 1 Score: 60.5 bits (145), Expect = 3.560e-6 Identity = 55/156 (35.26%), Postives = 73/156 (46.79%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLLSDARQAPLPL---EPSCARQVWQ--SSKGDHILVISSISLVQKSKASPRDSSGSSPLHLAAERGHAGVVELLLQNGAEP---GDCNGAQQTPLHLAAARSFGTAADII 621
AA +G +E K L+ GAN + + D +T LH A++ GH V VLL+ D Q L E RQ +S G H +V L+ + GSSPLHLA + G V LL+ E D NG TPLH+AA R+ D +
Sbjct: 262 AAKSGFIESLKCLLEAGANRKETNDDDQTALHMASRYGHLNVAEVLLMVDDAQDRKMLVRAEDRLGRQALHEAASHGHHGIVRL---LLHNQAPITETTDGSSPLHLAVQCGDLKTVMALLEVHRESLHWTDING--DTPLHVAARRNHAHLIDAL 412
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A2A2LXP1_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2LXP1_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 3.670e-6 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLL-LSDARQAPLPLEP----SCARQVWQSSKGDHILVISSISLVQKSKA--SPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAARSF 600
AA G L ++ L+ GAN +D G+TPLH +A+ + VV + L + +A L +CA + KG + V+ + ++ K+ + + ++ LH+AA GHA +V++LL+NGA P D N T LHL A +
Sbjct: 490 AAKYGQLAVSQTLLALGANPNARDDKGQTPLHLSAENDYPDVVKLFLKMKQNNRAVLTAIDHNGFTCAHIA--AMKGS-LAVVKELMMIDKAMVIQAKTKTMEATTLHMAAAGGHANIVKILLENGANPEDENAHGMTALHLGAKNGY 634
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A2A2LHB4_9BILA (Ion_trans domain-containing protein n=2 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2LHB4_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 4.050e-6 Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLL-LSDARQAPLPLEP----SCARQVWQSSKGDHILVISSISLVQKSKA--SPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAARSF 600
AA G L ++ L+ GAN +D G+TPLH +A+ + VV + L + +A L +CA + KG + V+ + ++ K+ + + ++ LH+AA GHA +V++LL+NGA P D N T LHL A +
Sbjct: 949 AAKYGQLAVSQTLLALGANPNARDDKGQTPLHLSAENDYPDVVKLFLKMKQNNRAVLTAIDHNGFTCAHIA--AMKGS-LAVVKELMMIDKAMVIQAKTKTMEATTLHMAAAGGHANIVKILLENGANPEDENAHGMTALHLGAKNGY 1093
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A3M2HQT5_9GAMM (Uncharacterized protein n=1 Tax=Lysobacter pythonis TaxID=2483112 RepID=A0A3M2HQT5_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 4.980e-6 Identity = 46/148 (31.08%), Postives = 72/148 (48.65%), Query Frame = 1
Query: 187 NGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLL--------LSDARQAPLPLEPSCARQVWQSSK-------------GDHILVISS---------ISLVQKSKASP--RDSSGSSPLHLAAERGHAGVVELLLQNG 534
+G E L+ GA++R +DGDGRTPLH AA++ V ++LL L D RQ+PL L +C W+ +K G +L+ ++ + + + +A+P R G + LH AA GH G+++ LL G
Sbjct: 325 HGRPEAVMTLLANGADVRARDGDGRTPLHHAARSTDPSVAALLLDAAAEIDALDDQRQSPLAL--ACQAGNWRMAKFLVERGAHAHPAGGQPVLLAAAAPEEDDPAGVEFLLRQRAAPDARGEDGRTALHQAAAAGHLGILQTLLDAG 470
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Match: A0A158Q546_DRAME (ANK_REP_REGION domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A158Q546_DRAME) HSP 1 Score: 60.1 bits (144), Expect = 5.300e-6 Identity = 44/151 (29.14%), Postives = 76/151 (50.33%), Query Frame = 1
Query: 178 AASNGNLEGAKQLVYCGANLRWKDGDGRTPLHRAAQAGHAGVVSVLLL--SDARQAPLPLEPSCARQVWQSSKGDHILVISSISLVQKSKA--SPRDSSGSSPLHLAAERGHAGVVELLLQNGAEPGDCNGAQQTPLHLAAARSFGTAADI 618
AA +G L A+ L+ GAN +D G+TPLH AA+ + VV + L + R ++ + ++ + V+ + ++ K+ + + ++ LH+AA GHA +V++LL+NGA D N T LHL A F + ++
Sbjct: 605 AARHGQLAVAQTLLALGANANARDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRGVLTAIDHNGFTCAHIAAMKGSLGVVKELMMIDKAMVIQAKTKTMEATTLHMAAAGGHAKIVKILLENGANAEDENAHGMTALHLGAKNGFVSILEV 755 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig628.17121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig628.17121.1 >prot_F-serratus_M_contig628.17121.1 ID=prot_F-serratus_M_contig628.17121.1|Name=mRNA_F-serratus_M_contig628.17121.1|organism=Fucus serratus male|type=polypeptide|length=392bp PELDAWINHSATYRYWVDNMSTVGGHPNDPSDMRPLLIDIWRHAKLQAWKback to top mRNA from alignment at F-serratus_M_contig628:333497..334672- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig628.17121.1 ID=mRNA_F-serratus_M_contig628.17121.1|Name=mRNA_F-serratus_M_contig628.17121.1|organism=Fucus serratus male|type=mRNA|length=1176bp|location=Sequence derived from alignment at F-serratus_M_contig628:333497..334672- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig628:333497..334672- >mRNA_F-serratus_M_contig628.17121.1 ID=mRNA_F-serratus_M_contig628.17121.1|Name=mRNA_F-serratus_M_contig628.17121.1|organism=Fucus serratus male|type=CDS|length=2352bp|location=Sequence derived from alignment at F-serratus_M_contig628:333497..334672- (Fucus serratus male)back to top |