mRNA_F-serratus_M_contig6244.17094.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: D7FVE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE8_ECTSI) HSP 1 Score: 265 bits (677), Expect = 6.000e-82 Identity = 128/170 (75.29%), Postives = 141/170 (82.94%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REAIQIMGDLAV+YGFYGSEWD+ DP TY E AGEAL VTDP EAWVFHIL D T+ SAIWAAQRVP DHV+VVANQFIIKE+ PD + FMFS+NLFEVAE+GG GYKRGSG PLHF KAF RP D PHF YSTRR+WRVLD FAPSLGLSP+TD+ + +PFS R
Sbjct: 189 REAIQIMGDLAVEYGFYGSEWDSSDPITYEE--AGEALTVTDPDEAWVFHILSDYTTKSAIWAAQRVPADHVSVVANQFIIKEVYPDPHPD-FMFSDNLFEVAEKGGCGYKRGSGFPLHFVKAFGTRPDDFPHFAYSTRRVWRVLDTFAPSLGLSPFTDTFGQGHPFSAR 355
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A835ZHN0_9STRA (Peptidase family C69-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN0_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.550e-62 Identity = 106/169 (62.72%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSV 516
REAIQIMGD+AV+ GFYGSEWD D FTY E AGE+L VTDP E W+FHI DDT+TSA+W AQRVPD HV+VVANQFII+ + P+A + MFS NL++VA+R G + GM L FT+AF RP D PH+ YSTRR+WRVLD+ APSL LSPY D++ PFSV
Sbjct: 166 REAIQIMGDMAVELGFYGSEWDPTDLFTYLE--AGESLTVTDPDEVWIFHISSDDTATSAVWVAQRVPDGHVSVVANQFIIRAVDPEASPDDMMFSANLWDVAQRAGL-WDPEQGM-LDFTEAFAVRPKDQPHYAYSTRRVWRVLDMAAPSLNLSPYVDTMGDGLPFSV 330
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A7S2UZI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZI8_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.840e-52 Identity = 93/170 (54.71%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REAIQIMG+L+ YGF+GS WD D + E AGEA V DP EAW+FHI+PD T SAIW A+RV D+ V VVAN F+I+++ PD D + +MFS+NLF A+ G + S P+ FT F+ RP+D PH+ YSTRR+WRV + PSL LSPYT+ +A DYPFSV+
Sbjct: 172 REAIQIMGELSEMYGFFGSAWDGGDGM-FGE--AGEAFGVVDPTEAWMFHIMPDSTLKSAIWVAKRVADEEVAVVANNFVIRDVHPD-DPDNYMFSQNLFSEAQLAGC-WNPNSDQPVDFTYCFSARPNDIPHWSYSTRRVWRVFQLLKPSLKLSPYTNPIADDYPFSVK 336
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A8K1FPP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPP6_PYTOL) HSP 1 Score: 182 bits (461), Expect = 7.810e-51 Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REAIQIMGDL VKYG+YG+EW+ Y E AGEAL VTD EAW+FHILPDDT SAIWAAQRVPDDH++ VANQF+I E+ + +T++FM S N+ EVA R + SG FT+ F++ P D H YSTRR+WRV + P L LSPYTD + YPFSV+
Sbjct: 178 REAIQIMGDLGVKYGYYGAEWEGDG--VYGE--AGEALTVTDTTEAWMFHILPDDTGKSAIWAAQRVPDDHISAVANQFVIHELELN-NTDFFMASPNIHEVAIRNNL-WSPDSGEAFDFTRIFSQ-PRDEGHQYYSTRRVWRVFTLADPGLDLSPYTDVYSSGYPFSVK 340
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A3F2S056_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S056_9STRA) HSP 1 Score: 180 bits (456), Expect = 4.310e-50 Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REAIQIMGDLAV+YG+YG+EW+ F AGEAL VTD +EAW+FHILPDDT SA+WAAQRVPDD ++ VANQF+I+E+ + +E F+ S N+ +VA R +K G P FT+A+ + +DT H YSTRR+WR+ + P L LSP TD LA DYPFSV+
Sbjct: 176 REAIQIMGDLAVQYGYYGAEWEGDGVFD----EAGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLNNPSE-FLASPNIHDVAIRNNI-WKPDEGTPFDFTRAYAQPRADT-HQYYSTRRIWRLFTLANPELKLSPETDVLASDYPFSVK 338
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: D0N6P9_PHYIT (Peptidase, putative n=18 Tax=Phytophthora TaxID=4783 RepID=D0N6P9_PHYIT) HSP 1 Score: 179 bits (455), Expect = 4.490e-50 Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFS 513
REA+Q+MGDLAV+YG+YG+EW+ D Y E AGEAL VTD +EAW+FHILPDDT SAIWAAQRVPDD ++ VANQF+I+E+ D YF+ S N+ +VA R +K G P FT+A+ + DT H YSTRR+WR+ + P L LSP TD LA DYPFS
Sbjct: 175 REAVQLMGDLAVQYGYYGAEWEGND--VYDE--AGEALTVTDTKEAWIFHILPDDTGRSAIWAAQRVPDDQMSGVANQFVIRELDLDRPA-YFLASPNVHDVAIRNNL-WKPDDGTPFDFTRAYAQPRKDT-HQYYSTRRVWRLFTLANPELKLSPETDVLASDYPFS 335
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A6A3S4M1_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S4M1_9STRA) HSP 1 Score: 176 bits (447), Expect = 8.160e-49 Identity = 92/170 (54.12%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REA+Q+MGDLAV+YG+YG+ W+ D Y E AGEAL VTD +EAW+FHILPDDT SA+WAAQRVPDD ++ VANQF+I+E+ +E F+ S N+ +VA R +K G P FT+A+ + +T F YSTRR+WR+ + P+L LSP TD LA DYPFSV+
Sbjct: 176 REAVQLMGDLAVQYGYYGAVWEGRD--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLSRPSE-FLASPNVHDVAIRNNI-WKPDQGTPFDFTRAYAQPRKETHQF-YSTRRIWRLFTLANPALVLSPDTDVLASDYPFSVK 338
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A3M6VJV4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJV4_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.930e-48 Identity = 91/170 (53.53%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REAIQ+MGDLAV+YG+YG+EW+ Y E AGEAL VTD +EAW+FHILPDDT SA+WAAQRVPDD ++ VANQF+I+E+ + + F+ S N+ +VA R +K +G P FT+A+ +P H YSTRR+WR+ + P+L LSP TD LA DYPF V+
Sbjct: 172 REAIQLMGDLAVQYGYYGAEWEGGG--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAVWAAQRVPDDQISGVANQFVIRELDLNRPAD-FLASPNVHDVAIRNNI-WKPNNGTPFDFTRAY-AQPRKPAHQYYSTRRIWRLFTLANPALALSPETDVLASDYPFGVK 334
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: H3GSB1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSB1_PHYRM) HSP 1 Score: 172 bits (437), Expect = 2.150e-47 Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNRRPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSVR 519
REA+Q+MGDLAV+YG+YG+ W+ D Y E AGEAL VTD +EAW+FHILPDDT SAIWAAQRVPDD ++ VANQF+I+E+ + + F+ S N+ +VA R +K G P FT+A+ +P H YSTRR+WR+ + P L LS TD LA DYPFSV+
Sbjct: 176 REAVQLMGDLAVQYGYYGAVWEGAD--VYDE--AGEALTVTDTKEAWIFHILPDDTGKSAIWAAQRVPDDQISGVANQFVIRELDLNRPAD-FLASPNVHDVAIRNNI-WKPDQGTPFDFTRAY-AQPRKETHQYYSTRRIWRLFTLANPELKLSAETDVLASDYPFSVK 338
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Match: A0A5D6Y0Y6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y6_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.730e-47 Identity = 94/170 (55.29%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 10 REAIQIMGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTSTSAIWAAQRVPDDHVTVVANQFIIKEITPDADTEYFMFSENLFEVAERGGTGYKRGSGMPLHFTKAFNR-RPSDTPHFPYSTRRMWRVLDIFAPSLGLSPYTDSLARDYPFSV 516
R AIQIMGDL V+YG+YG+EWD D AGEAL VTD EAW+FHILPDDT SA+W AQRVPDDHVT VANQF+I+ + + FM S+NL VA R G S P FT+A+ + RP+ H YSTRR+WRV + P+L L P TD+ A DYPFSV
Sbjct: 175 RAAIQIMGDLGVQYGYYGAEWDGNDALA----EAGEALTVTDTTEAWMFHILPDDTGASAVWVAQRVPDDHVTAVANQFVIRGVDLTRPDD-FMASDNLHAVALRQGLW--DNSSAPFDFTRAYAQPRPAGQQH--YSTRRVWRVFTLADPALPLPPTTDTFASDYPFSV 335 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6244.17094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6244.17094.1 >prot_F-serratus_M_contig6244.17094.1 ID=prot_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=polypeptide|length=165bp MGDLAVKYGFYGSEWDAMDPFTYTEVRAGEALMVTDPQEAWVFHILPDDTback to top mRNA from alignment at F-serratus_M_contig6244:23445..25246- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6244.17094.1 ID=mRNA_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=mRNA|length=1802bp|location=Sequence derived from alignment at F-serratus_M_contig6244:23445..25246- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6244:23445..25246- >mRNA_F-serratus_M_contig6244.17094.1 ID=mRNA_F-serratus_M_contig6244.17094.1|Name=mRNA_F-serratus_M_contig6244.17094.1|organism=Fucus serratus male|type=CDS|length=990bp|location=Sequence derived from alignment at F-serratus_M_contig6244:23445..25246- (Fucus serratus male)back to top |