mRNA_F-serratus_M_contig6233.17075.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.670e-65 Identity = 151/341 (44.28%), Postives = 199/341 (58.36%), Query Frame = 3
Query: 345 QRRPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLCAGLDV---ERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAXXXXXXGSGPGASACLASKRFCGGFMAASQAQAASASKVTV------APSLPAEHFLNEAGREVTRYRVASGLAMEEAQESG---KILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1328
+ PLL DW VL L+EP+L PFM QK LE + VTGS+ + + +L GL+ + KA+ Q G A + P EAL DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+ EH GVW+AVA AA DIA A + A + PA P ASKR M+A +A AA + E + EV+ ++ A G+ + + Q++ K ++ +PLD WR +++PLLAALARR+LAIP+SQAQSERVFS+AG VT TR+RL E VELLV L+N+W VV+EW++S
Sbjct: 224 EVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQ--QGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPA---SAEKPASDPVQTQPAPLGGGQGASKR---PRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.790e-51 Identity = 129/291 (44.33%), Postives = 165/291 (56.70%), Query Frame = 3
Query: 354 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLCAGLDVERKALQQPNH-GASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRM-TALSAAGSTPAXXXXXXGSGPGASACLASKRFCGGFMAASQAQAASASKVTVAPSLPA--EHFLNEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERV 1211
P+L DW VL L+EP+L PFM QK LE + VTGS+ VP I +L GL+ L+ + G SA A +LP EAL +DF NR+GDGS IL +REG RRQPQGF+ QV ATA+DPR K LYG+ EH VW+AVA A DIA +S T+ SA + P G GA + F AA+ A A +A+ +L E + EV ++ G+++ GK +Y DPLDWWR ++FP LAALARR+LAIP+SQA SERV
Sbjct: 263 PVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAP----KRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 181 bits (458), Expect = 6.260e-46 Identity = 129/357 (36.13%), Postives = 181/357 (50.70%), Query Frame = 3
Query: 354 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLCAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQAS------------------------------------------VRMTALSAAGSTPAXXXXXXGSGPGASACLASKRFCGGFMAASQAQAASASKVTVAPSLPAEHFLNEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKN 1295
PLL DW VL+L+E +L PFM QK LE S VT LV P I DL GLD + LQ + A ++V A+ ++ C +AL D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+ EH VW A A A +A +A+ +AG++ + + Q+A+AS + + E ++ REV +++ GLA+ +E G+ + PL+WWR+ A ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+ E V L+V L+N
Sbjct: 192 PLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQM--ESIIS---REVDAFKITPGLAVSW-EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.560e-43 Identity = 110/247 (44.53%), Postives = 143/247 (57.89%), Query Frame = 3
Query: 603 DFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVR-MTALSAAGSTPAXXXXXXGSGPGASACLASKRFCGGFMAASQAQAASASKVTVAPSLPAEHFL----NEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1328
DF NR+GDG +IL ++EG RRQP GF+ VQV+ATALDPR K+LYGV +E VW+ V A IA T+ S A S G XXXXXX AQA ++ F+ + E+T ++V++G+ M E + G +Y DPLDWWR+ FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 139 bits (349), Expect = 3.150e-33 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 3
Query: 354 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLCAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 800
PLL DW VL+L+EP+L PFM QK LE S VT SLV I DL LD + LQ + A ++V A+ +L C AL D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A
Sbjct: 164 PLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA 313
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 114 bits (286), Expect = 5.040e-24 Identity = 102/325 (31.38%), Postives = 147/325 (45.23%), Query Frame = 3
Query: 354 PLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLCAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAXXXXXXGSGPGASACLASKRFCGGFMAASQAQAASASKVTVAPSLPAEHFLNEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEW 1319
PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I DL LD + LQ A ++V A+ KD F + + ++ +P+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A +A+ +Q+ AS+S + V P+ + AS + ++ Q + NA ++ R+L IPASQ QSERVFSSAG +VT+TR R+ E VEL++ L+N+ V+ W
Sbjct: 236 PLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATED----------------------------------------TQSAGASSSLIPVEPAAXXXXXXXX----XXDFAAASAVPGDKQQSA--------------NA------SSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRW 478
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 103 bits (256), Expect = 8.940e-20 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3
Query: 429 KKLESNNVTGSLVVPLICDLCAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQ 812
K++ + VTGSLVVP I DL L+ L + + A V A ++PC++AL D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV +E VW+ V A IA T+
Sbjct: 191 KRVIQDVVTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 7.420e-18 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query: 552 VLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAV 776
V AR ++PC++AL DF NR+GDG +IL ++EGPRRQP GF+ VQV+ATALDPR K+L+GV +E VW+ V
Sbjct: 155 VNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.430e-14 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 1140 FPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVALKNIWSVVEEWQQS 1328
FP LA LARR+LAIPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 154 FPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Match: A0A151I7P1_9HYME (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7P1_9HYME) HSP 1 Score: 75.5 bits (184), Expect = 2.190e-13 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 3
Query: 1104 DPLDWWRINAVKFPLLAALARRLLAIPASQAQSERVFSSAGQIVTQTRNRLSSEKVELLVAL 1289
D +DWW+ N +FP+LAA+AR+ LAIPA+Q SER+FS AG IVT TR++L E VE L L
Sbjct: 16 DIIDWWKCNVTRFPILAAVARQYLAIPATQVSSERLFSDAGNIVTATRSKLIPENVEKLCFL 77 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6233.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6233.17075.1 >prot_F-serratus_M_contig6233.17075.1 ID=prot_F-serratus_M_contig6233.17075.1|Name=mRNA_F-serratus_M_contig6233.17075.1|organism=Fucus serratus male|type=polypeptide|length=310bp MYVQKKLESNNVTGSLVVPLICDLCAGLDVERKALQQPNHGASAVVLAARback to top mRNA from alignment at F-serratus_M_contig6233:9379..11047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6233.17075.1 ID=mRNA_F-serratus_M_contig6233.17075.1|Name=mRNA_F-serratus_M_contig6233.17075.1|organism=Fucus serratus male|type=mRNA|length=1669bp|location=Sequence derived from alignment at F-serratus_M_contig6233:9379..11047- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6233:9379..11047- >mRNA_F-serratus_M_contig6233.17075.1 ID=mRNA_F-serratus_M_contig6233.17075.1|Name=mRNA_F-serratus_M_contig6233.17075.1|organism=Fucus serratus male|type=CDS|length=1860bp|location=Sequence derived from alignment at F-serratus_M_contig6233:9379..11047- (Fucus serratus male)back to top |